BQ623890
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_THEEB (Tryptophan synthase beta chain OS=Thermosynechococcus elongatus (strain BP-1) GN=trpB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.582e-31 Identity = 44/72 (61.11%), Postives = 55/72 (76.39%), Query Frame = 3
Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 311
G EYY+VTD EA+ A R ++LEGI+PALETAHALAYLE LCP L ++V+N SGRGDKDV+T +Y +
Sbjct: 337 GRAEYYSVTDTEAVAACVRLAQLEGILPALETAHALAYLETLCPQLTGQPRIVINCSGRGDKDVETIGRYFE 408 HSP 2 Score: 64.6994 bits (156), Expect = 2.582e-31 Identity = 28/34 (82.35%), Postives = 31/34 (91.18%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103
D DGQ++E HSISAGLDYPGVGPEHS+LKD GRA
Sbjct: 306 DADGQVVEAHSISAGLDYPGVGPEHSYLKDIGRA 339
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_PROM5 (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain MIT 9515) GN=trpB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 7.422e-31 Identity = 47/73 (64.38%), Postives = 53/73 (72.60%), Query Frame = 3
Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQV 314
G EY +VTD EAL A K S LEGIIPALETAHA A+LEKLCPTL T++V+N SGRGDKDV T L +
Sbjct: 342 GRAEYGSVTDTEALNALKLVSELEGIIPALETAHAFAWLEKLCPTLEKNTEIVINCSGRGDKDVNTVASSLDI 414 HSP 2 Score: 61.2326 bits (147), Expect = 7.422e-31 Identity = 27/34 (79.41%), Postives = 31/34 (91.18%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103
D++GQ+ E HSISAGLDYPGVGPEHS+LKD GRA
Sbjct: 311 DKNGQVQEAHSISAGLDYPGVGPEHSYLKDIGRA 344
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_SYNPW (Tryptophan synthase beta chain OS=Synechococcus sp. (strain WH7803) GN=trpB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 9.663e-31 Identity = 49/71 (69.01%), Postives = 55/71 (77.46%), Query Frame = 3
Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 308
G EY VTD EALEA + SRLEGIIPALETAHA A+LE LCPTL+ GT+VV+N SGRGDKDV T + L
Sbjct: 342 GRAEYGAVTDAEALEALQLVSRLEGIIPALETAHAFAWLETLCPTLSAGTEVVLNCSGRGDKDVNTVAERL 412 HSP 2 Score: 60.8474 bits (146), Expect = 9.663e-31 Identity = 26/34 (76.47%), Postives = 31/34 (91.18%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103
D+DGQ+ E HSISAGLDYPGVGPEHS+L++ GRA
Sbjct: 311 DQDGQVQEAHSISAGLDYPGVGPEHSYLREIGRA 344
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_PROMT (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain NATL2A) GN=trpB PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.258e-30 Identity = 46/71 (64.79%), Postives = 54/71 (76.06%), Query Frame = 3
Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 308
G EY VTD EA+EA + S+LEGIIPALETAHA AYLEKLCPTL +++V+N SGRGDKDV T + L
Sbjct: 343 GRAEYAAVTDTEAIEALQLVSKLEGIIPALETAHAFAYLEKLCPTLNHNSEIVINCSGRGDKDVNTVAEKL 413 HSP 2 Score: 61.6178 bits (148), Expect = 1.258e-30 Identity = 27/34 (79.41%), Postives = 31/34 (91.18%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103
D+DGQ+ E HSISAGLDYPGVGPEHS+LK+ GRA
Sbjct: 312 DKDGQVEEAHSISAGLDYPGVGPEHSYLKEIGRA 345
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_PROM1 (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain NATL1A) GN=trpB PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.258e-30 Identity = 46/71 (64.79%), Postives = 54/71 (76.06%), Query Frame = 3
Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 308
G EY VTD EA+EA + S+LEGIIPALETAHA AYLEKLCPTL +++V+N SGRGDKDV T + L
Sbjct: 343 GRAEYAAVTDTEAIEALQLVSKLEGIIPALETAHAFAYLEKLCPTLNHNSEIVINCSGRGDKDVNTVAEKL 413 HSP 2 Score: 61.6178 bits (148), Expect = 1.258e-30 Identity = 27/34 (79.41%), Postives = 31/34 (91.18%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103
D+DGQ+ E HSISAGLDYPGVGPEHS+LK+ GRA
Sbjct: 312 DKDGQVEEAHSISAGLDYPGVGPEHSYLKEIGRA 345
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_SYNS3 (Tryptophan synthase beta chain OS=Synechococcus sp. (strain CC9311) GN=trpB PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.638e-30 Identity = 45/71 (63.38%), Postives = 54/71 (76.06%), Query Frame = 3
Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 308
G EY VTDDEA+ A + S LEGIIPALETAHA A+LE LCPTL +G+++V+N SGRGDKDV T + L
Sbjct: 344 GRAEYGAVTDDEAITALRLVSELEGIIPALETAHAFAWLEMLCPTLPNGSEIVINCSGRGDKDVNTVAEKL 414 HSP 2 Score: 62.3882 bits (150), Expect = 1.638e-30 Identity = 27/34 (79.41%), Postives = 31/34 (91.18%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103
D+DGQ+ E HSISAGLDYPGVGPEHS+L+D GRA
Sbjct: 313 DQDGQVQEAHSISAGLDYPGVGPEHSYLRDIGRA 346
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_PROMS (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain AS9601) GN=trpB PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.778e-30 Identity = 46/73 (63.01%), Postives = 53/73 (72.60%), Query Frame = 3
Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQV 314
G EY +VTD EAL+A K S LEGIIPALETAHA A+L+KLCPTL T +V+N SGRGDKDV T L +
Sbjct: 342 GRAEYGSVTDQEALDALKLVSELEGIIPALETAHAFAWLDKLCPTLEKDTNIVINCSGRGDKDVNTVASSLDI 414 HSP 2 Score: 60.077 bits (144), Expect = 2.778e-30 Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103
D++GQ+ E HSISAGLDYPGVGPEHS LKD GRA
Sbjct: 311 DDNGQVQEAHSISAGLDYPGVGPEHSHLKDIGRA 344
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_PROMA (Tryptophan synthase beta chain OS=Prochlorococcus marinus GN=trpB PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 7.985e-30 Identity = 46/72 (63.89%), Postives = 54/72 (75.00%), Query Frame = 3
Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 311
G EY VTD EAL A + S EGIIPALETAHALA+LEKLCPTL+ G ++V+N SGRGDKDV T + L+
Sbjct: 342 GRAEYAAVTDQEALSALQLLSEKEGIIPALETAHALAFLEKLCPTLSSGKEIVINCSGRGDKDVNTVAEKLK 413 HSP 2 Score: 59.3066 bits (142), Expect = 7.985e-30 Identity = 26/34 (76.47%), Postives = 30/34 (88.24%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103
D +GQ+ E HSISAGLDYPGVGPEHS+LK+ GRA
Sbjct: 311 DSNGQVQEAHSISAGLDYPGVGPEHSYLKEIGRA 344
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_SYNPX (Tryptophan synthase beta chain OS=Synechococcus sp. (strain WH8102) GN=trpB PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.985e-30 Identity = 46/71 (64.79%), Postives = 54/71 (76.06%), Query Frame = 3
Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 308
G EY VTD +AL A + S LEGIIPALETAHA A+LE+LCPTL DG++VV+N SGRGDKDV T + L
Sbjct: 344 GRAEYGAVTDQQALGALRLVSELEGIIPALETAHAFAWLEQLCPTLPDGSEVVINCSGRGDKDVNTVAEKL 414 HSP 2 Score: 60.077 bits (144), Expect = 7.985e-30 Identity = 26/34 (76.47%), Postives = 30/34 (88.24%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103
D DGQ+ E HSISAGLDYPGVGPEHS+L++ GRA
Sbjct: 313 DSDGQVQEAHSISAGLDYPGVGPEHSYLREIGRA 346
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_PROM4 (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain MIT 9211) GN=trpB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.040e-29 Identity = 45/69 (65.22%), Postives = 53/69 (76.81%), Query Frame = 3
Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIK 302
G EY VTD EAL A + S+LEGIIPALETAHA A+L+ LCP+LA GT++V+N SGRGDKDV T K
Sbjct: 342 GRAEYVAVTDKEALNALELVSKLEGIIPALETAHAFAWLDTLCPSLAPGTEIVINCSGRGDKDVNTVAK 410 HSP 2 Score: 59.3066 bits (142), Expect = 1.040e-29 Identity = 26/34 (76.47%), Postives = 29/34 (85.29%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103
D DGQ+ E HSISAGLDYPGVGPEHS+L + GRA
Sbjct: 311 DSDGQVQEAHSISAGLDYPGVGPEHSYLNEIGRA 344 The following BLAST results are available for this feature:
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 410
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623890 ID=BQ623890; Name=BQ623890; organism=Citrus sinensis; type=EST; length=475bpback to top |