BQ623890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB1_ARATH (Tryptophan synthase beta chain 1, chloroplastic OS=Arabidopsis thaliana GN=TSB1 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 2.253e-43 Identity = 62/78 (79.49%), Postives = 69/78 (88.46%), Query Frame = 3 Query: 81 F*KMKGVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQV 314 F K G EYY++TD+EALEAFKR SRLEGIIPALET+HALAYLEKLCPTL+DGT+VV+NFSGRGDKDVQT KYL V Sbjct: 393 FFKDMGRAEYYSITDEEALEAFKRVSRLEGIIPALETSHALAYLEKLCPTLSDGTRVVLNFSGRGDKDVQTVAKYLDV 470 HSP 2 Score: 69.707 bits (169), Expect = 2.253e-43 Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 2 Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103 D+DGQIIEPHSISAGLDYPGVGPEHSF KD GRA Sbjct: 367 DDDGQIIEPHSISAGLDYPGVGPEHSFFKDMGRA 400
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRBP2_ARATH (Tryptophan synthase beta chain 2, chloroplastic OS=Arabidopsis thaliana GN=TSB2 PE=2 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 2.936e-43 Identity = 62/78 (79.49%), Postives = 70/78 (89.74%), Query Frame = 3 Query: 81 F*KMKGVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQV 314 F K G EY++VTD+EALEAFKR SRLEGIIPALET+HALA+LEKLCPTL DG +VV+NFSGRGDKDVQTAIKYL+V Sbjct: 398 FLKDVGRAEYFSVTDEEALEAFKRVSRLEGIIPALETSHALAHLEKLCPTLPDGARVVLNFSGRGDKDVQTAIKYLEV 475 HSP 2 Score: 71.2478 bits (173), Expect = 2.936e-43 Identity = 32/34 (94.12%), Postives = 33/34 (97.06%), Query Frame = 2 Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103 D+DGQIIEPHSISAGLDYPGVGPEHSFLKD GRA Sbjct: 372 DDDGQIIEPHSISAGLDYPGVGPEHSFLKDVGRA 405
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB2_MAIZE (Tryptophan synthase beta chain 2, chloroplastic (Fragment) OS=Zea mays GN=TSB2 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 9.930e-41 Identity = 61/78 (78.21%), Postives = 65/78 (83.33%), Query Frame = 3 Query: 81 F*KMKGVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQV 314 F K G EY +VTD EAL+AFKR SRLEGIIPALET+HALAYLEKLCPTLADG +VVVN SGRGDKDV TA KYL V Sbjct: 366 FLKDIGRAEYDSVTDQEALDAFKRVSRLEGIIPALETSHALAYLEKLCPTLADGVRVVVNCSGRGDKDVHTASKYLDV 443 HSP 2 Score: 70.4774 bits (171), Expect = 9.930e-41 Identity = 31/34 (91.18%), Postives = 33/34 (97.06%), Query Frame = 2 Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103 D+DGQ+IEPHSISAGLDYPGVGPEHSFLKD GRA Sbjct: 340 DDDGQVIEPHSISAGLDYPGVGPEHSFLKDIGRA 373
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB1_MAIZE (Tryptophan synthase beta chain 1 (Fragment) OS=Zea mays GN=TSB1 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.260e-40 Identity = 59/78 (75.64%), Postives = 64/78 (82.05%), Query Frame = 3 Query: 81 F*KMKGVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQV 314 F K G EY +VTD EAL+AFKR SRLEGIIPALET+HALAYLEKLCPTL DG +VV+N SGRGDKDV TA KYL V Sbjct: 312 FLKDIGRAEYDSVTDQEALDAFKRVSRLEGIIPALETSHALAYLEKLCPTLPDGVRVVLNCSGRGDKDVHTASKYLDV 389 HSP 2 Score: 70.4774 bits (171), Expect = 8.260e-40 Identity = 31/34 (91.18%), Postives = 33/34 (97.06%), Query Frame = 2 Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103 D+DGQ+IEPHSISAGLDYPGVGPEHSFLKD GRA Sbjct: 286 DDDGQVIEPHSISAGLDYPGVGPEHSFLKDIGRA 319
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB2_ANASP (Tryptophan synthase beta chain 2 OS=Anabaena sp. (strain PCC 7120) GN=trpB2 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 6.636e-36 Identity = 50/71 (70.42%), Postives = 58/71 (81.69%), Query Frame = 3 Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 308 G EYY+VTD+EAL AF+R SRLEGIIPALETAHA+AYLE LCP L ++V+N SGRGDKDVQT K+L Sbjct: 340 GRAEYYSVTDEEALAAFQRLSRLEGIIPALETAHAIAYLETLCPQLDGSPRIVINCSGRGDKDVQTVAKFL 410 HSP 2 Score: 67.781 bits (164), Expect = 6.636e-36 Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 2 Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103 DEDGQ+IE HSISAGLDYPGVGPEHS+LKD GRA Sbjct: 309 DEDGQVIEAHSISAGLDYPGVGPEHSYLKDVGRA 342
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_ANAVT (Tryptophan synthase beta chain OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=trpB PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.910e-35 Identity = 48/71 (67.61%), Postives = 58/71 (81.69%), Query Frame = 3 Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 308 G EYY+VTD++AL AF+R SRLEGIIPALETAHA+AYLE LCP L ++++N SGRGDKDVQT K+L Sbjct: 340 GRAEYYSVTDEQALAAFQRLSRLEGIIPALETAHAIAYLETLCPQLDGSPRIIINCSGRGDKDVQTVAKFL 410 HSP 2 Score: 67.781 bits (164), Expect = 1.910e-35 Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 2 Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103 DEDGQ+IE HSISAGLDYPGVGPEHS+LKD GRA Sbjct: 309 DEDGQVIEAHSISAGLDYPGVGPEHSYLKDVGRA 342
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_SYNY3 (Tryptophan synthase beta chain OS=Synechocystis sp. (strain PCC 6803) GN=trpB PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.500e-35 Identity = 51/76 (67.11%), Postives = 60/76 (78.95%), Query Frame = 3 Query: 87 KMKGVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQV 314 K G EYY+VTD EA+ A +R S+LEGIIPALETAHA AYLE LCP L +G ++V+N SGRGDKDVQT KYLQ+ Sbjct: 335 KDAGRAEYYSVTDQEAITALQRLSQLEGIIPALETAHAFAYLETLCPQLKNGERIVINCSGRGDKDVQTVAKYLQM 410 HSP 2 Score: 63.1586 bits (152), Expect = 5.500e-35 Identity = 27/34 (79.41%), Postives = 31/34 (91.18%), Query Frame = 2 Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103 D++GQ+ E HSISAGLDYPGVGPEHS+LKD GRA Sbjct: 307 DKEGQVTEAHSISAGLDYPGVGPEHSYLKDAGRA 340
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB1_ANASP (Tryptophan synthase beta chain 1 OS=Anabaena sp. (strain PCC 7120) GN=trpB1 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.085e-32 Identity = 47/75 (62.67%), Postives = 59/75 (78.67%), Query Frame = 3 Query: 90 MKGVR--EYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 308 +K +R EYY+VTD +AL+ F++ SRLEGIIPALET+HA+AYLE LCP L ++V+N SGRGDKDVQT K L Sbjct: 333 LKDIRRAEYYSVTDKQALDGFQQLSRLEGIIPALETSHAIAYLETLCPQLNGSPRIVINCSGRGDKDVQTVAKVL 407 HSP 2 Score: 64.3142 bits (155), Expect = 1.085e-32 Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 2 Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103 DEDGQ+IE HSISAGLDYPGVGPEHS+LKD RA Sbjct: 306 DEDGQVIEAHSISAGLDYPGVGPEHSYLKDIRRA 339
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_SYNSC (Tryptophan synthase beta chain OS=Synechococcus sp. (strain CC9605) GN=trpB PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.169e-31 Identity = 48/71 (67.61%), Postives = 56/71 (78.87%), Query Frame = 3 Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 308 G EY VTD +AL+A + S LEGIIPALETAHA A+LE+LCPTLADGT+VV+N SGRGDKDV T + L Sbjct: 344 GRAEYAAVTDQQALDALRLVSELEGIIPALETAHAFAWLEQLCPTLADGTEVVINCSGRGDKDVNTVAEKL 414 HSP 2 Score: 60.8474 bits (146), Expect = 1.169e-31 Identity = 26/34 (76.47%), Postives = 31/34 (91.18%), Query Frame = 2 Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103 D DGQ++E HSISAGLDYPGVGPEHS+L++ GRA Sbjct: 313 DGDGQVMEAHSISAGLDYPGVGPEHSYLREIGRA 346
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_PROMP (Tryptophan synthase beta chain OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=trpB PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.581e-31 Identity = 47/73 (64.38%), Postives = 54/73 (73.97%), Query Frame = 3 Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQV 314 G EY +VTD EAL+A K S LEGIIPALETAHA A+LEKLCPTL T++V+N SGRGDKDV T L + Sbjct: 341 GRAEYGSVTDAEALDALKLVSELEGIIPALETAHAFAWLEKLCPTLDKDTEIVINCSGRGDKDVNTVASSLNI 413 HSP 2 Score: 63.1586 bits (152), Expect = 2.581e-31 Identity = 28/34 (82.35%), Postives = 31/34 (91.18%), Query Frame = 2 Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103 D+DGQ+ E HSISAGLDYPGVGPEHS+LKD GRA Sbjct: 310 DKDGQVQEAHSISAGLDYPGVGPEHSYLKDIGRA 343 The following BLAST results are available for this feature:
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 410
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623890 ID=BQ623890; Name=BQ623890; organism=Citrus sinensis; type=EST; length=475bpback to top |