BQ623890
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_SYNJB (Tryptophan synthase beta chain OS=Synechococcus sp. GN=trpB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.353e-29 Identity = 49/80 (61.25%), Postives = 54/80 (67.50%), Query Frame = 3
Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCP--------TLADGTKVVVNFSGRGDKDVQTAIKYLQ 311
G EYY VTDDEA+EA SRLEGIIPALETAHALAYL+ L P + +VVVN SGRGDKD+ T KYLQ
Sbjct: 340 GRAEYYAVTDDEAVEALLLLSRLEGIIPALETAHALAYLKTLAPQQGLRPANAIGPQQRVVVNCSGRGDKDLNTVFKYLQ 419 HSP 2 Score: 61.6178 bits (148), Expect = 1.353e-29 Identity = 27/34 (79.41%), Postives = 31/34 (91.18%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103
DE+GQ+ E HSISAGLDYPGVGPEHS+LK+ GRA
Sbjct: 309 DEEGQVQEAHSISAGLDYPGVGPEHSYLKEIGRA 342
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_SYNS9 (Tryptophan synthase beta chain OS=Synechococcus sp. (strain CC9902) GN=trpB PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.354e-29 Identity = 44/71 (61.97%), Postives = 53/71 (74.65%), Query Frame = 3
Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 308
G EY VTD++AL+ + S LEGIIPALETAHA A+LE+LCPTL G +VV+N SGRGDKDV T + L
Sbjct: 344 GRAEYAAVTDEQALDGLRLVSELEGIIPALETAHAFAWLEQLCPTLPQGCEVVINCSGRGDKDVNTVAEKL 414 HSP 2 Score: 61.2326 bits (147), Expect = 1.354e-29 Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103
D DGQ+ E HSISAGLDYPGVGPEHS+LK+ GRA
Sbjct: 313 DSDGQVQEAHSISAGLDYPGVGPEHSYLKEIGRA 346
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_PROM9 (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain MIT 9312) GN=trpB PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.763e-29 Identity = 44/73 (60.27%), Postives = 53/73 (72.60%), Query Frame = 3
Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQV 314
G EY +VTD EAL+A + S LEGIIPALET+HA A+L+KLCPTL T +V+N SGRGDKDV T L +
Sbjct: 342 GRAEYGSVTDQEALDALRLVSELEGIIPALETSHAFAWLDKLCPTLEKDTHIVINCSGRGDKDVNTVASSLDI 414 HSP 2 Score: 60.077 bits (144), Expect = 1.763e-29 Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103
D++GQ+ E HSISAGLDYPGVGPEHS LKD GRA
Sbjct: 311 DDNGQVQEAHSISAGLDYPGVGPEHSHLKDIGRA 344
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_PROM0 (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain MIT 9301) GN=trpB PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.295e-29 Identity = 45/73 (61.64%), Postives = 53/73 (72.60%), Query Frame = 3
Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQV 314
G EY +VTD EAL+A K S LEGIIPALET+HA A+L+KLCPTL T +V+N SGRGDKDV T L +
Sbjct: 342 GRAEYGSVTDQEALDALKLVSELEGIIPALETSHAFAWLDKLCPTLEKDTHIVINCSGRGDKDVNTVASSLDI 414 HSP 2 Score: 58.5362 bits (140), Expect = 2.295e-29 Identity = 26/34 (76.47%), Postives = 30/34 (88.24%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103
D++GQ+ E HSISAGLDYPGVGPEHS LK+ GRA
Sbjct: 311 DDNGQVQEAHSISAGLDYPGVGPEHSHLKEIGRA 344
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_PROM2 (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain MIT 9215) GN=trpB PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.890e-29 Identity = 43/73 (58.90%), Postives = 53/73 (72.60%), Query Frame = 3
Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQV 314
G EY +VTD EAL++ + S LEGIIPALET+HA A+L+KLCPTL T +V+N SGRGDKDV T L +
Sbjct: 342 GRAEYGSVTDQEALDSLRLVSELEGIIPALETSHAFAWLDKLCPTLEKDTHIVINCSGRGDKDVNTVASSLDI 414 HSP 2 Score: 60.077 bits (144), Expect = 3.890e-29 Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103
D++GQ+ E HSISAGLDYPGVGPEHS LKD GRA
Sbjct: 311 DDNGQVQEAHSISAGLDYPGVGPEHSHLKDIGRA 344
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_PROMM (Tryptophan synthase beta chain OS=Prochlorococcus marinus (strain MIT 9313) GN=trpB PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.061e-29 Identity = 46/71 (64.79%), Postives = 54/71 (76.06%), Query Frame = 3
Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 308
G EY V+D +AL+A + S LEGIIPALETAHA A+LE LCPTLA GT+VV+N SGRGDKDV T + L
Sbjct: 362 GRAEYAAVSDQQALDALRLVSELEGIIPALETAHAFAWLETLCPTLAAGTEVVINCSGRGDKDVNTVAEKL 432 HSP 2 Score: 57.3806 bits (137), Expect = 5.061e-29 Identity = 25/34 (73.53%), Postives = 30/34 (88.24%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103
D++GQ+ E HSISAGLDYPGVGPEHS+L + GRA
Sbjct: 331 DDEGQVQEAHSISAGLDYPGVGPEHSYLCEIGRA 364
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_DECAR (Tryptophan synthase beta chain OS=Dechloromonas aromatica (strain RCB) GN=trpB PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.183e-28 Identity = 41/66 (62.12%), Postives = 47/66 (71.21%), Query Frame = 3
Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQT 293
G EY VTD EAL AF R+EGIIPALE++HALAY KL PTLA ++VN SGRGDKD+ T
Sbjct: 325 GRAEYQPVTDSEALAAFHTLCRIEGIIPALESSHALAYAAKLAPTLAKDKILLVNLSGRGDKDMHT 390 HSP 2 Score: 65.4698 bits (158), Expect = 4.183e-28 Identity = 29/34 (85.29%), Postives = 32/34 (94.12%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103
DEDGQIIE HS+SAGLDYPGVGPEH++LKD GRA
Sbjct: 294 DEDGQIIETHSVSAGLDYPGVGPEHAWLKDLGRA 327
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_METPP (Tryptophan synthase beta chain OS=Methylibium petroleiphilum (strain PM1) GN=trpB PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 7.086e-28 Identity = 39/66 (59.09%), Postives = 48/66 (72.73%), Query Frame = 3
Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQT 293
G EY +TDDEAL+AF R R EGIIPALE++HA+AY KL PT+ ++VN SGRGDKD+ T
Sbjct: 325 GRAEYVGITDDEALQAFHRLCRTEGIIPALESSHAVAYAMKLAPTMRSDQSLLVNLSGRGDKDIGT 390 HSP 2 Score: 62.3882 bits (150), Expect = 7.086e-28 Identity = 28/34 (82.35%), Postives = 31/34 (91.18%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103
D +GQIIE HSISAGLDYPGVGPEH++LKD GRA
Sbjct: 294 DANGQIIETHSISAGLDYPGVGPEHAYLKDIGRA 327
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_RALSO (Tryptophan synthase beta chain OS=Ralstonia solanacearum GN=trpB PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.564e-27 Identity = 39/69 (56.52%), Postives = 48/69 (69.57%), Query Frame = 3
Query: 87 KMKGVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQT 293
K G +Y +TD EAL+AF R+EGIIPALE++HALAY KL PTL ++VN SGRGDKD+ T
Sbjct: 326 KDAGRAQYVGITDKEALQAFHDLCRMEGIIPALESSHALAYACKLAPTLPKDKILLVNLSGRGDKDMHT 394 HSP 2 Score: 66.6254 bits (161), Expect = 1.564e-27 Identity = 30/34 (88.24%), Postives = 32/34 (94.12%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103
DEDGQIIE HSISAGLDYPGVGPEH++LKD GRA
Sbjct: 298 DEDGQIIETHSISAGLDYPGVGPEHAWLKDAGRA 331
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_ACIF5 (Tryptophan synthase beta chain OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=trpB PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.036e-27 Identity = 39/69 (56.52%), Postives = 47/69 (68.12%), Query Frame = 3
Query: 87 KMKGVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQT 293
K G EY TD+EAL AF R R EGIIPALE+AHALA+ +L PT+ ++VN SGRGDKD+ T
Sbjct: 322 KDTGRAEYVAATDEEALAAFHRLCRTEGIIPALESAHALAHAFRLAPTMRSDQTIIVNLSGRGDKDIHT 390 HSP 2 Score: 64.3142 bits (155), Expect = 2.036e-27 Identity = 28/34 (82.35%), Postives = 31/34 (91.18%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103
DEDGQI+ HSISAGLDYPGVGPEH++LKD GRA
Sbjct: 294 DEDGQILPTHSISAGLDYPGVGPEHAYLKDTGRA 327 The following BLAST results are available for this feature:
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 410
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623890 ID=BQ623890; Name=BQ623890; organism=Citrus sinensis; type=EST; length=475bpback to top |