BQ623890
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_SALAR (Tryptophan synthase beta chain OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=trpB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.477e-19 Identity = 37/67 (55.22%), Postives = 48/67 (71.64%), Query Frame = 3
Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTK-VVVNFSGRGDKDVQT 293
G +Y ++TDDEALEAFK R EGIIPALE++HALA+ K+ + + +VVN SGRGDKD+ T
Sbjct: 320 GRADYVSITDDEALEAFKTLCRHEGIIPALESSHALAHALKMMREHPEKEQLLVVNLSGRGDKDIFT 386 HSP 2 Score: 46.595 bits (109), Expect = 3.477e-19 Identity = 21/32 (65.62%), Postives = 25/32 (78.12%), Query Frame = 2
Query: 8 DGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103
DGQI E +SISAGLD+P VGP+H+ L GRA
Sbjct: 291 DGQIEESYSISAGLDFPSVGPQHAHLNSIGRA 322
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_BACSK (Tryptophan synthase beta chain OS=Bacillus clausii (strain KSM-K16) GN=trpB PE=3 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 5.879e-19 Identity = 31/62 (50.00%), Postives = 41/62 (66.13%), Query Frame = 3
Query: 108 YYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQT 293
Y VTD EAL+A ++ EGIIPA+E+AHALA ++ T+ V+V SGRGDKD+ T
Sbjct: 327 YEAVTDKEALDALALLAKEEGIIPAIESAHALAKAFQMAKTMTPNQSVLVCLSGRGDKDMHT 388 HSP 2 Score: 54.299 bits (129), Expect = 5.879e-19 Identity = 24/33 (72.73%), Postives = 28/33 (84.85%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGR 100
DE GQI EP+SISAGLDYPGVGPEH++L + R
Sbjct: 292 DESGQIKEPYSISAGLDYPGVGPEHAYLAAQKR 324
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_VIBSL (Tryptophan synthase beta chain OS=Vibrio splendidus (strain LGP32) GN=trpB PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.880e-19 Identity = 37/65 (56.92%), Postives = 47/65 (72.31%), Query Frame = 3
Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTK-VVVNFSGRGDKDV 287
G EY NVTDDEALEAF+ +R EGII ALE++HALA+ K+ + + +VVN SGRGDKD+
Sbjct: 319 GRAEYDNVTDDEALEAFQLIARKEGIIAALESSHALAHAVKMAHDDPEKEQLLVVNLSGRGDKDI 383 HSP 2 Score: 47.3654 bits (111), Expect = 5.880e-19 Identity = 20/34 (58.82%), Postives = 27/34 (79.41%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103
DE+GQ+ E +S+SAGLD+P VGP+H+ L GRA
Sbjct: 288 DENGQVEESYSVSAGLDFPSVGPQHAHLNAIGRA 321
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_CITK8 (Tryptophan synthase beta chain OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=trpB PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 5.880e-19 Identity = 36/67 (53.73%), Postives = 47/67 (70.15%), Query Frame = 3
Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTK-VVVNFSGRGDKDVQT 293
G +Y ++TDDEALEAFK EGIIPALE++HALA+ K+ + + +VVN SGRGDKD+ T
Sbjct: 320 GRADYVSITDDEALEAFKTLCLHEGIIPALESSHALAHALKMMRENPEKEQLLVVNLSGRGDKDIFT 386 HSP 2 Score: 48.521 bits (114), Expect = 5.880e-19 Identity = 21/33 (63.64%), Postives = 27/33 (81.82%), Query Frame = 2
Query: 5 EDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103
E+GQI E +SISAGLD+P VGP+H++L GRA
Sbjct: 290 EEGQIEESYSISAGLDFPSVGPQHAYLNSIGRA 322
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_EDWI9 (Tryptophan synthase beta chain OS=Edwardsiella ictaluri (strain 93-146) GN=trpB PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 7.646e-19 Identity = 40/73 (54.79%), Postives = 49/73 (67.12%), Query Frame = 3
Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTK-VVVNFSGRGDKDVQTAIKYLQ 311
G +Y + TDDEAL AF + SR EGIIPALE+AHALA+ KL + + +VVN SGRGDKD+ T LQ
Sbjct: 319 GRADYVSATDDEALAAFMQLSRQEGIIPALESAHALAHALKLIHQQPEKEQLLVVNLSGRGDKDIFTVHDILQ 391 HSP 2 Score: 44.2838 bits (103), Expect = 7.646e-19 Identity = 19/32 (59.38%), Postives = 25/32 (78.12%), Query Frame = 2
Query: 8 DGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103
+GQI E +S+SAGLD+P VGP+H+ L GRA
Sbjct: 290 EGQIEESYSLSAGLDFPSVGPQHAHLNSIGRA 321
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_BLOPB (Tryptophan synthase beta chain OS=Blochmannia pennsylvanicus (strain BPEN) GN=trpB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 7.646e-19 Identity = 39/79 (49.37%), Postives = 51/79 (64.56%), Query Frame = 3
Query: 78 VF*KMKGVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKV-VVNFSGRGDKDVQTAIKYLQ 311
V+ K G +Y ++ D EA+ AFK+ S EGIIPALE+AHALA+ K+ D ++ VVN SGRGDKD+ T LQ
Sbjct: 313 VYLKNTGRVQYVSINDIEAITAFKKLSIHEGIIPALESAHALAHALKIIQKQPDKAQILVVNLSGRGDKDISTVHNALQ 391 HSP 2 Score: 45.4394 bits (106), Expect = 7.646e-19 Identity = 18/31 (58.06%), Postives = 25/31 (80.65%), Query Frame = 2
Query: 8 DGQIIEPHSISAGLDYPGVGPEHSFLKDEGR 100
+GQ+ +S+SAGLD+P VGPEH +LK+ GR
Sbjct: 290 EGQVKNSYSVSAGLDFPSVGPEHVYLKNTGR 320
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_HALSA (Tryptophan synthase beta chain OS=Halobacterium salinarium GN=trpB PE=3 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 9.925e-19 Identity = 38/63 (60.32%), Postives = 45/63 (71.43%), Query Frame = 3
Query: 114 NVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIK 302
NV DD AL AF R SR EG+IPALET+HA+A L++ DG VVVN SGRGDKD+ T I+
Sbjct: 354 NVDDDAALAAFHRLSRDEGVIPALETSHAVAALDQYD---GDG-PVVVNVSGRGDKDLDTVIE 412 HSP 2 Score: 48.521 bits (114), Expect = 9.925e-19 Identity = 22/32 (68.75%), Postives = 25/32 (78.12%), Query Frame = 2
Query: 5 EDGQIIEPHSISAGLDYPGVGPEHSFLKDEGR 100
E GQI+E HS+SAGLDY GVGPE + L D GR
Sbjct: 318 ETGQIVESHSVSAGLDYAGVGPELAHLVDTGR 349
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_HALS3 (Tryptophan synthase beta chain OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=trpB PE=3 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 9.925e-19 Identity = 38/63 (60.32%), Postives = 45/63 (71.43%), Query Frame = 3
Query: 114 NVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIK 302
NV DD AL AF R SR EG+IPALET+HA+A L++ DG VVVN SGRGDKD+ T I+
Sbjct: 354 NVDDDAALAAFHRLSRDEGVIPALETSHAVAALDQYD---GDG-PVVVNVSGRGDKDLDTVIE 412 HSP 2 Score: 48.521 bits (114), Expect = 9.925e-19 Identity = 22/32 (68.75%), Postives = 25/32 (78.12%), Query Frame = 2
Query: 5 EDGQIIEPHSISAGLDYPGVGPEHSFLKDEGR 100
E GQI+E HS+SAGLDY GVGPE + L D GR
Sbjct: 318 ETGQIVESHSVSAGLDYAGVGPELAHLVDTGR 349
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_FRAP2 (Tryptophan synthase beta chain OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=trpB PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 9.943e-19 Identity = 38/67 (56.72%), Postives = 47/67 (70.15%), Query Frame = 3
Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTK-VVVNFSGRGDKDVQT 293
G EY + TD+EAL+AFK + EGIIPALE++HALAY KL D + +VVN SGRGDKD+ T
Sbjct: 319 GRAEYASATDNEALDAFKLLCKKEGIIPALESSHALAYALKLAYENPDKEQLLVVNLSGRGDKDIFT 385 HSP 2 Score: 45.4394 bits (106), Expect = 9.943e-19 Identity = 21/34 (61.76%), Postives = 26/34 (76.47%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103
+ DGQI E +SISAGLD+P VGP+H+ L GRA
Sbjct: 288 NSDGQIEESYSISAGLDFPSVGPQHAHLLAIGRA 321
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_LEPBP (Tryptophan synthase beta chain OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=trpB PE=3 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 9.943e-19 Identity = 30/68 (44.12%), Postives = 42/68 (61.76%), Query Frame = 3
Query: 105 EYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 308
+Y VTD++AL+ F +R+EGIIPALETAHA + L +++ SGRGDKDV ++ L
Sbjct: 324 DYRMVTDEQALDCFLEVTRVEGIIPALETAHAFYVARDVAKDLGKKKDLIICLSGRGDKDVTEVLRIL 391 HSP 2 Score: 52.373 bits (124), Expect = 9.943e-19 Identity = 22/33 (66.67%), Postives = 26/33 (78.79%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGR 100
DE GQI+ HS+SAGLDYPGVGPEH++L R
Sbjct: 290 DEAGQIVPAHSVSAGLDYPGVGPEHAYLSQTKR 322 The following BLAST results are available for this feature:
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 410
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623890 ID=BQ623890; Name=BQ623890; organism=Citrus sinensis; type=EST; length=475bpback to top |