BQ623890
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_OCHA4 (Tryptophan synthase beta chain OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=trpB PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.184e-26 Identity = 39/74 (52.70%), Postives = 50/74 (67.57%), Query Frame = 3
Query: 87 KMKGVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 308
K G +Y + DDEAL+AF+ +R EGIIPALE+AHA+A K+ PT+ ++VN SGRGDKDV T K L
Sbjct: 329 KDSGRVDYVPILDDEALDAFQLCTRTEGIIPALESAHAIAQAVKMAPTMGKDQVMIVNLSGRGDKDVHTVGKLL 402 HSP 2 Score: 62.003 bits (149), Expect = 2.184e-26 Identity = 26/33 (78.79%), Postives = 31/33 (93.94%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGR 100
++DGQI+E HS+SAGLDYPGVGPEHS+LKD GR
Sbjct: 301 NDDGQILEGHSVSAGLDYPGVGPEHSWLKDSGR 333
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_RHILO (Tryptophan synthase beta chain OS=Rhizobium loti GN=trpB PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.699e-26 Identity = 39/68 (57.35%), Postives = 49/68 (72.06%), Query Frame = 3
Query: 105 EYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYL 308
EY + DDEALEAFK ++R+EGIIPALE+AHA+A+ K+ P + V+VN SGRGDKDV T L
Sbjct: 345 EYVPILDDEALEAFKLTTRVEGIIPALESAHAIAHAVKIVPAMDKDQIVIVNLSGRGDKDVHTVASML 412 HSP 2 Score: 58.5362 bits (140), Expect = 3.699e-26 Identity = 25/31 (80.65%), Postives = 29/31 (93.55%), Query Frame = 2
Query: 8 DGQIIEPHSISAGLDYPGVGPEHSFLKDEGR 100
DGQI++ HSISAGLDYPGVGPEHS+L+D GR
Sbjct: 313 DGQIMDGHSISAGLDYPGVGPEHSWLRDSGR 343
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_PSEPF (Tryptophan synthase beta chain OS=Pseudomonas fluorescens (strain Pf0-1) GN=trpB PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.700e-26 Identity = 40/69 (57.97%), Postives = 51/69 (73.91%), Query Frame = 3
Query: 105 EYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 311
+Y +VTDDEAL AF + RLEGIIPALE+AHALA + K P L +VVN SGRGDKD+QT + +++
Sbjct: 335 QYTSVTDDEALAAFHQCCRLEGIIPALESAHALAEVFKRAPKLPKDHLMVVNLSGRGDKDMQTVMHHME 403 HSP 2 Score: 59.3066 bits (142), Expect = 3.700e-26 Identity = 25/33 (75.76%), Postives = 30/33 (90.91%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGR 100
D+DGQII+ HSISAGLDYPG+GPEH++L D GR
Sbjct: 301 DDDGQIIDAHSISAGLDYPGIGPEHAWLHDIGR 333
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_METFK (Tryptophan synthase beta chain OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=trpB PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 3.702e-26 Identity = 38/63 (60.32%), Postives = 46/63 (73.02%), Query Frame = 3
Query: 105 EYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQT 293
EY VTDDEA+EAF R EGIIPALE++HALAY KL T++ ++VN SGRGDKD+ T
Sbjct: 329 EYVAVTDDEAMEAFHTLCRTEGIIPALESSHALAYAMKLAETMSPDQALLVNLSGRGDKDINT 391 HSP 2 Score: 60.8474 bits (146), Expect = 3.702e-26 Identity = 28/34 (82.35%), Postives = 31/34 (91.18%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103
DE+GQIIE HSISAGLDYPGVGPEH++LKD RA
Sbjct: 295 DENGQIIETHSISAGLDYPGVGPEHAWLKDIKRA 328
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_NITEC (Tryptophan synthase beta chain OS=Nitrosomonas eutropha (strain C91) GN=trpB PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.702e-26 Identity = 38/66 (57.58%), Postives = 45/66 (68.18%), Query Frame = 3
Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQT 293
G EY +TD EAL AF R EGI+PALE++HALAY KL PTL ++VN SGRGDKD+ T
Sbjct: 325 GRAEYVAITDGEALAAFHALCRFEGIMPALESSHALAYAAKLAPTLRKDQLLLVNLSGRGDKDMAT 390 HSP 2 Score: 63.5438 bits (153), Expect = 3.702e-26 Identity = 29/34 (85.29%), Postives = 32/34 (94.12%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103
DE+GQIIE HSISAGLDYPGVGPEH++LKD GRA
Sbjct: 294 DENGQIIETHSISAGLDYPGVGPEHAWLKDCGRA 327
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_THETN (Tryptophan synthase beta chain OS=Thermoanaerobacter tengcongensis GN=trpB PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.274e-26 Identity = 43/73 (58.90%), Postives = 48/73 (65.75%), Query Frame = 3
Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQV 314
G EY TD+EAL AF SR EGIIPALE+AHALAY KL L + +VVN SGRGDKDV T K + V
Sbjct: 317 GRAEYVYATDEEALAAFMDLSRTEGIIPALESAHALAYAMKLAKKLDEDKIIVVNLSGRGDKDVNTVAKVMGV 389 HSP 2 Score: 58.5362 bits (140), Expect = 6.274e-26 Identity = 25/34 (73.53%), Postives = 31/34 (91.18%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103
DE+G+I+ HSISAGLDYPGVGPEH++LK+ GRA
Sbjct: 286 DEEGKILPVHSISAGLDYPGVGPEHAYLKEIGRA 319
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_MYCLE (Tryptophan synthase beta chain OS=Mycobacterium leprae GN=trpB PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.062e-25 Identity = 37/70 (52.86%), Postives = 48/70 (68.57%), Query Frame = 3
Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKY 305
G EY +TD EA+EAF+ R EGI+PALE+AHA+A KL + G +VVN SGRGDKD++ A K+
Sbjct: 341 GRAEYQPITDSEAIEAFRLLCRTEGILPALESAHAVAGALKLASEIGKGAVIVVNLSGRGDKDIEAAAKW 410 HSP 2 Score: 60.8474 bits (146), Expect = 1.062e-25 Identity = 26/34 (76.47%), Postives = 31/34 (91.18%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103
DEDGQ IE HSI+AGLDYPGVGPEH++L++ GRA
Sbjct: 310 DEDGQTIESHSIAAGLDYPGVGPEHAWLRETGRA 343
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_POLNA (Tryptophan synthase beta chain OS=Polaromonas naphthalenivorans (strain CJ2) GN=trpB PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.381e-25 Identity = 37/66 (56.06%), Postives = 45/66 (68.18%), Query Frame = 3
Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQT 293
G EY +TD EAL+AF R EGIIPALE+AHA+AY KL T+ ++VN SGRGDKD+ T
Sbjct: 326 GRAEYVGITDTEALQAFHYLCRTEGIIPALESAHAVAYAMKLAKTMRSDQSILVNLSGRGDKDIGT 391 HSP 2 Score: 61.2326 bits (147), Expect = 1.381e-25 Identity = 26/34 (76.47%), Postives = 31/34 (91.18%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103
++DGQ+ E HSISAGLDYPGVGPEH++LKD GRA
Sbjct: 295 NDDGQVTETHSISAGLDYPGVGPEHAYLKDIGRA 328
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_VESOH (Tryptophan synthase beta chain OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=trpB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.383e-25 Identity = 34/69 (49.28%), Postives = 47/69 (68.12%), Query Frame = 3
Query: 87 KMKGVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQT 293
K G +Y +TD EALEAF +++EGI+PALE++HA+AY KL L +++N SGRGDKD+ T
Sbjct: 324 KDSGRAQYMAITDKEALEAFHILTKIEGILPALESSHAVAYGIKLAKKLGKNKSIIINLSGRGDKDIHT 392 HSP 2 Score: 64.3142 bits (155), Expect = 1.383e-25 Identity = 28/34 (82.35%), Postives = 32/34 (94.12%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGRA 103
DE+GQIIE HSI+AGLDYPGVGPEH++LKD GRA
Sbjct: 296 DENGQIIEGHSIAAGLDYPGVGPEHAYLKDSGRA 329
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_BACHK (Tryptophan synthase beta chain OS=Bacillus thuringiensis subsp. konkukian GN=trpB PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.383e-25 Identity = 35/68 (51.47%), Postives = 53/68 (77.94%), Query Frame = 3
Query: 108 YYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 311
Y+++TDDEALEAF+ ++ EGIIPALE++HA+AY KL P + + +V+ SGRGDKDV++ +Y++
Sbjct: 328 YHSITDDEALEAFQLLTKKEGIIPALESSHAVAYALKLAPQMKEDEGLVICLSGRGDKDVESIKRYME 395 HSP 2 Score: 58.9214 bits (141), Expect = 1.383e-25 Identity = 27/33 (81.82%), Postives = 29/33 (87.88%), Query Frame = 2
Query: 2 DEDGQIIEPHSISAGLDYPGVGPEHSFLKDEGR 100
+E+GQI E HSISAGLDYPGVGPEHS LKD GR
Sbjct: 293 NEEGQIQEAHSISAGLDYPGVGPEHSLLKDIGR 325 The following BLAST results are available for this feature:
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 410
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623890 ID=BQ623890; Name=BQ623890; organism=Citrus sinensis; type=EST; length=475bpback to top |