BQ623890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_VIBVU (Tryptophan synthase beta chain OS=Vibrio vulnificus GN=trpB PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.240e-11 Identity = 37/73 (50.68%), Postives = 51/73 (69.86%), Query Frame = 3 Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTK-VVVNFSGRGDKDVQTAIKYLQ 311 G EY ++TDDEAL+AF+ +R EGIIPALE++HALA+ K+ + + +VVN SGRGDKD+ T L+ Sbjct: 319 GRAEYDSITDDEALDAFQELARSEGIIPALESSHALAHALKMARNNPEKEQLLVVNLSGRGDKDIFTVHAILE 391
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_HAEIN (Tryptophan synthase beta chain OS=Haemophilus influenzae GN=trpB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.619e-11 Identity = 37/72 (51.39%), Postives = 50/72 (69.44%), Query Frame = 3 Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTK-VVVNFSGRGDKDVQTAIKYL 308 G +Y ++TD+EAL AF+ ++ EGIIPALE++HALAY KL + + +VVN SGRGDKD+ T K L Sbjct: 321 GRADYVSITDEEALNAFQELAKHEGIIPALESSHALAYALKLIKQNPEKEQLLVVNLSGRGDKDIFTVDKIL 392
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_HAEIE (Tryptophan synthase beta chain OS=Haemophilus influenzae (strain PittEE) GN=trpB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.619e-11 Identity = 37/72 (51.39%), Postives = 50/72 (69.44%), Query Frame = 3 Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTK-VVVNFSGRGDKDVQTAIKYL 308 G +Y ++TD+EAL AF+ ++ EGIIPALE++HALAY KL + + +VVN SGRGDKD+ T K L Sbjct: 321 GRADYVSITDEEALNAFQELAKHEGIIPALESSHALAYALKLIKQNPEKEQLLVVNLSGRGDKDIFTVDKIL 392
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_HAEI8 (Tryptophan synthase beta chain OS=Haemophilus influenzae (strain 86-028NP) GN=trpB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.619e-11 Identity = 37/72 (51.39%), Postives = 50/72 (69.44%), Query Frame = 3 Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTK-VVVNFSGRGDKDVQTAIKYL 308 G +Y ++TD+EAL AF+ ++ EGIIPALE++HALAY KL + + +VVN SGRGDKD+ T K L Sbjct: 321 GRADYVSITDEEALNAFQELAKHEGIIPALESSHALAYALKLIKQNPEKEQLLVVNLSGRGDKDIFTVDKIL 392
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_BRASB (Tryptophan synthase beta chain OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=trpB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.619e-11 Identity = 36/60 (60.00%), Postives = 42/60 (70.00%), Query Frame = 3 Query: 108 YYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDV 287 Y + TDDEAL AF+ SRLEGIIPALE AHA+A + +L P +VVN GRGDKDV Sbjct: 334 YLSATDDEALAAFQLLSRLEGIIPALEPAHAIAKVMELAPKKPKEHLMVVNLCGRGDKDV 393
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_ACTPJ (Tryptophan synthase beta chain OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=trpB PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.619e-11 Identity = 38/72 (52.78%), Postives = 50/72 (69.44%), Query Frame = 3 Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTK-VVVNFSGRGDKDVQTAIKYL 308 G EY ++T+ EAL+AF+ ++ EGIIPALE++HALAY KL D + +VVN SGRGDKD+ T K L Sbjct: 321 GRAEYVSITNQEALDAFQALAQHEGIIPALESSHALAYALKLIAQNPDKEQLLVVNLSGRGDKDIFTVDKIL 392
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_LEPIN (Tryptophan synthase beta chain OS=Leptospira interrogans GN=trpB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.762e-11 Identity = 33/61 (54.10%), Postives = 42/61 (68.85%), Query Frame = 3 Query: 105 EYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDV 287 EY NV D+ AL+AF R+EGIIPALETAHA Y + L T++ +++ SGRGDKDV Sbjct: 325 EYVNVDDEGALDAFIEVCRIEGIIPALETAHAFRYAKDLARTMSKKENILICLSGRGDKDV 385
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_LEPIC (Tryptophan synthase beta chain OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=trpB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.762e-11 Identity = 33/61 (54.10%), Postives = 42/61 (68.85%), Query Frame = 3 Query: 105 EYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDV 287 EY NV D+ AL+AF R+EGIIPALETAHA Y + L T++ +++ SGRGDKDV Sbjct: 325 EYVNVDDEGALDAFIEVCRIEGIIPALETAHAFRYAKDLARTMSKKENILICLSGRGDKDV 385
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_PSYIN (Tryptophan synthase beta chain OS=Psychromonas ingrahamii (strain 37) GN=trpB PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.154e-11 Identity = 36/72 (50.00%), Postives = 45/72 (62.50%), Query Frame = 3 Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKVVVNFSGRGDKDVQTAIKYLQ 311 G +Y TDDEAL+AF S EGIIPALE+AHALA+ KL ++VN SGRGDKD+ T + + Sbjct: 319 GRAQYVYATDDEALDAFHELSLKEGIIPALESAHALAHALKLIKHDDKEQIIIVNLSGRGDKDIFTVAEIFE 390
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Match: TRPB_AERHH (Tryptophan synthase beta chain OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=trpB PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.037e-11 Identity = 35/67 (52.24%), Postives = 49/67 (73.13%), Query Frame = 3 Query: 96 GVREYYNVTDDEALEAFKRSSRLEGIIPALETAHALAYLEKLCPTLADGTKV-VVNFSGRGDKDVQT 293 G EY +VTD EAL+AF+ ++ EGIIPALE++HALA+ K+ + + +V +VN SGRGDKD+ T Sbjct: 319 GRAEYPSVTDKEALDAFQELAKSEGIIPALESSHALAHALKMARSEPEKEQVLIVNLSGRGDKDIFT 385 The following BLAST results are available for this feature:
BLAST of BQ623890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 410
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623890 ID=BQ623890; Name=BQ623890; organism=Citrus sinensis; type=EST; length=475bpback to top |