BQ624119
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ624119 vs. ExPASy Swiss-Prot
Match: YCF72_ORYSJ (Uncharacterized protein ycf72 OS=Oryza sativa subsp. japonica GN=ycf72-1 PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.018e-47 Identity = 82/95 (86.32%), Postives = 84/95 (88.42%), Query Frame = -1 Query: 296 LTTGRFPSQHLDPALPKLLWFAPTFPTCPTVAEQFLDIKRTSPEGNFNVADFPSFAISFATAPAALANCPPFPSVISMLCMAVPKGISVEVDSSF 580 LTTGR PSQHLDPALPKL WF PT PTCPTVA+QF D KRTSP+GN VAD PSFAISFATAPAALANCPP P VISMLCMAVPKGISVEVDSSF Sbjct: 21 LTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKRTSPDGNLKVADLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSF 115 HSP 2 Score: 38.1206 bits (87), Expect = 1.018e-47 Identity = 16/21 (76.19%), Postives = 19/21 (90.48%), Query Frame = -3 Query: 231 INQNPFPNRTSFFQSIRLSGC 293 +++NPFPN TSFFQSIRLS C Sbjct: 116 LSKNPFPNCTSFFQSIRLSRC 136
BLAST of BQ624119 vs. ExPASy Swiss-Prot
Match: YCF72_ORYSI (Uncharacterized protein ycf72 OS=Oryza sativa subsp. indica GN=ycf72-1 PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.018e-47 Identity = 82/95 (86.32%), Postives = 84/95 (88.42%), Query Frame = -1 Query: 296 LTTGRFPSQHLDPALPKLLWFAPTFPTCPTVAEQFLDIKRTSPEGNFNVADFPSFAISFATAPAALANCPPFPSVISMLCMAVPKGISVEVDSSF 580 LTTGR PSQHLDPALPKL WF PT PTCPTVA+QF D KRTSP+GN VAD PSFAISFATAPAALANCPP P VISMLCMAVPKGISVEVDSSF Sbjct: 21 LTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKRTSPDGNLKVADLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSF 115 HSP 2 Score: 38.1206 bits (87), Expect = 1.018e-47 Identity = 16/21 (76.19%), Postives = 19/21 (90.48%), Query Frame = -3 Query: 231 INQNPFPNRTSFFQSIRLSGC 293 +++NPFPN TSFFQSIRLS C Sbjct: 116 LSKNPFPNCTSFFQSIRLSRC 136
BLAST of BQ624119 vs. ExPASy Swiss-Prot
Match: YCF72_ORYSA (Uncharacterized protein ycf72 OS=Oryza sativa GN=ycf72-1 PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.018e-47 Identity = 82/95 (86.32%), Postives = 84/95 (88.42%), Query Frame = -1 Query: 296 LTTGRFPSQHLDPALPKLLWFAPTFPTCPTVAEQFLDIKRTSPEGNFNVADFPSFAISFATAPAALANCPPFPSVISMLCMAVPKGISVEVDSSF 580 LTTGR PSQHLDPALPKL WF PT PTCPTVA+QF D KRTSP+GN VAD PSFAISFATAPAALANCPP P VISMLCMAVPKGISVEVDSSF Sbjct: 21 LTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKRTSPDGNLKVADLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSF 115 HSP 2 Score: 38.1206 bits (87), Expect = 1.018e-47 Identity = 16/21 (76.19%), Postives = 19/21 (90.48%), Query Frame = -3 Query: 231 INQNPFPNRTSFFQSIRLSGC 293 +++NPFPN TSFFQSIRLS C Sbjct: 116 LSKNPFPNCTSFFQSIRLSRC 136
BLAST of BQ624119 vs. ExPASy Swiss-Prot
Match: YCF72_ORYNI (Uncharacterized protein ycf72 OS=Oryza nivara GN=ycf72-1 PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.018e-47 Identity = 82/95 (86.32%), Postives = 84/95 (88.42%), Query Frame = -1 Query: 296 LTTGRFPSQHLDPALPKLLWFAPTFPTCPTVAEQFLDIKRTSPEGNFNVADFPSFAISFATAPAALANCPPFPSVISMLCMAVPKGISVEVDSSF 580 LTTGR PSQHLDPALPKL WF PT PTCPTVA+QF D KRTSP+GN VAD PSFAISFATAPAALANCPP P VISMLCMAVPKGISVEVDSSF Sbjct: 21 LTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKRTSPDGNLKVADLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSF 115 HSP 2 Score: 38.1206 bits (87), Expect = 1.018e-47 Identity = 16/21 (76.19%), Postives = 19/21 (90.48%), Query Frame = -3 Query: 231 INQNPFPNRTSFFQSIRLSGC 293 +++NPFPN TSFFQSIRLS C Sbjct: 116 LSKNPFPNCTSFFQSIRLSRC 136
BLAST of BQ624119 vs. ExPASy Swiss-Prot
Match: YCF72_SACOF (Uncharacterized protein ycf72 OS=Saccharum officinarum GN=ycf72-1 PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 3.830e-47 Identity = 81/95 (85.26%), Postives = 84/95 (88.42%), Query Frame = -1 Query: 296 LTTGRFPSQHLDPALPKLLWFAPTFPTCPTVAEQFLDIKRTSPEGNFNVADFPSFAISFATAPAALANCPPFPSVISMLCMAVPKGISVEVDSSF 580 LTTGR PSQHLDPALPKL WF PT PTCPTVA+QF D KRTSP+GN VA+ PSFAISFATAPAALANCPP P VISMLCMAVPKGISVEVDSSF Sbjct: 21 LTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKRTSPDGNLKVANLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSF 115 HSP 2 Score: 38.1206 bits (87), Expect = 3.830e-47 Identity = 16/21 (76.19%), Postives = 19/21 (90.48%), Query Frame = -3 Query: 231 INQNPFPNRTSFFQSIRLSGC 293 +++NPFPN TSFFQSIRLS C Sbjct: 116 LSKNPFPNCTSFFQSIRLSRC 136
BLAST of BQ624119 vs. ExPASy Swiss-Prot
Match: YCF72_SACHY (Uncharacterized protein ycf72 OS=Saccharum hybrid GN=ycf72-1 PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 3.830e-47 Identity = 81/95 (85.26%), Postives = 84/95 (88.42%), Query Frame = -1 Query: 296 LTTGRFPSQHLDPALPKLLWFAPTFPTCPTVAEQFLDIKRTSPEGNFNVADFPSFAISFATAPAALANCPPFPSVISMLCMAVPKGISVEVDSSF 580 LTTGR PSQHLDPALPKL WF PT PTCPTVA+QF D KRTSP+GN VA+ PSFAISFATAPAALANCPP P VISMLCMAVPKGISVEVDSSF Sbjct: 21 LTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKRTSPDGNLKVANLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSF 115 HSP 2 Score: 38.1206 bits (87), Expect = 3.830e-47 Identity = 16/21 (76.19%), Postives = 19/21 (90.48%), Query Frame = -3 Query: 231 INQNPFPNRTSFFQSIRLSGC 293 +++NPFPN TSFFQSIRLS C Sbjct: 116 LSKNPFPNCTSFFQSIRLSRC 136
BLAST of BQ624119 vs. ExPASy Swiss-Prot
Match: YCF72_MAIZE (Uncharacterized protein ycf72 OS=Zea mays GN=ycf72-1 PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 6.506e-47 Identity = 81/95 (85.26%), Postives = 84/95 (88.42%), Query Frame = -1 Query: 296 LTTGRFPSQHLDPALPKLLWFAPTFPTCPTVAEQFLDIKRTSPEGNFNVADFPSFAISFATAPAALANCPPFPSVISMLCMAVPKGISVEVDSSF 580 LTTGR PSQHLDPALPKL WF PT PTCPTVA+QF D KRTSP+GN VA+ PSFAISFATAPAALANCPP P VISMLCMAVPKGISVEVDSSF Sbjct: 21 LTTGRLPSQHLDPALPKLFWFTPTLPTCPTVAKQFWDTKRTSPDGNLKVANLPSFAISFATAPAALANCPPLPRVISMLCMAVPKGISVEVDSSF 115 HSP 2 Score: 37.3502 bits (85), Expect = 6.506e-47 Identity = 16/20 (80.00%), Postives = 18/20 (90.00%), Query Frame = -3 Query: 231 NQNPFPNRTSFFQSIRLSGC 290 ++NPFPN TSFFQSIRLS C Sbjct: 117 SKNPFPNCTSFFQSIRLSRC 136
BLAST of BQ624119 vs. ExPASy Swiss-Prot
Match: RK2_CITSI (50S ribosomal protein L2, chloroplastic OS=Citrus sinensis GN=rpl2-A PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 7.439e-43 Identity = 87/88 (98.86%), Postives = 87/88 (98.86%), Query Frame = 3 Query: 315 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANHKSLGRAGSKCWLGKRPVV 578 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGAN KSLGRAGSKCWLGKRPVV Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVV 218
BLAST of BQ624119 vs. ExPASy Swiss-Prot
Match: RK2_BUXMI (50S ribosomal protein L2, chloroplastic OS=Buxus microphylla GN=rpl2-A PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 7.439e-43 Identity = 87/88 (98.86%), Postives = 87/88 (98.86%), Query Frame = 3 Query: 315 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANHKSLGRAGSKCWLGKRPVV 578 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGAN KSLGRAGSKCWLGKRPVV Sbjct: 129 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVV 216
BLAST of BQ624119 vs. ExPASy Swiss-Prot
Match: RK2_NYMAL (50S ribosomal protein L2, chloroplastic OS=Nymphaea alba GN=rpl2-A PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 1.657e-42 Identity = 86/88 (97.73%), Postives = 87/88 (98.86%), Query Frame = 3 Query: 315 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGANHKSLGRAGSKCWLGKRPVV 578 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL+LPSGEVRLISKNCSATVGQVGNVGAN KSLGRAGSKCWLGKRPVV Sbjct: 131 TDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCSATVGQVGNVGANQKSLGRAGSKCWLGKRPVV 218 The following BLAST results are available for this feature:
BLAST of BQ624119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ624119 ID=BQ624119; Name=BQ624119; organism=Citrus sinensis; type=EST; length=580bpback to top |