CB290532
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290532 vs. ExPASy Swiss-Prot
Match: MPPB_ARATH (Probable mitochondrial-processing peptidase subunit beta OS=Arabidopsis thaliana GN=At3g02090 PE=1 SV=2) HSP 1 Score: 307.375 bits (786), Expect = 6.292e-83 Identity = 150/175 (85.71%), Postives = 163/175 (93.14%), Query Frame = -3 Query: 293 VMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASPVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRPYWNRY 817 VMQ MLGSWNKN GGKH+GS+L QRV INEIAES+MAFNTNYKDTGLFGVYAVAK DCLDDL+YAIMYE TKLAYRVS+ADVTRARNQLKSSLLLH+DGTSP+AEDIGRQLLTYGRRIP AELFARID+VDAS VKRVAN++IYD+DIAI+A+GPIQ LPDYN FRRR YWNRY Sbjct: 357 VMQTMLGSWNKNVGGGKHVGSDLTQRVAINEIAESIMAFNTNYKDTGLFGVYAVAKADCLDDLSYAIMYEVTKLAYRVSDADVTRARNQLKSSLLLHMDGTSPIAEDIGRQLLTYGRRIPTAELFARIDAVDASTVKRVANKYIYDKDIAISAIGPIQDLPDYNKFRRRTYWNRY 531
BLAST of CB290532 vs. ExPASy Swiss-Prot
Match: MPPB_RAT (Mitochondrial-processing peptidase subunit beta OS=Rattus norvegicus GN=Pmpcb PE=1 SV=3) HSP 1 Score: 161.384 bits (407), Expect = 5.576e-39 Identity = 77/174 (44.25%), Postives = 116/174 (66.67%), Query Frame = -3 Query: 296 VMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASPVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRPYWNR 817 V ++G+W+++ GG ++ S+LAQ + S +FNT+Y DTGL+G+Y V + + D+ +A+ E +L VSE++V RA+N LK+++LL +DG++P+ EDIGRQ+L Y RRIP EL ARID+VDA V+ V ++IY + AIAA+GPI+ LPD+N W R Sbjct: 315 VANTLIGNWDRSFGGGMNLSSKLAQLTCHGNLCHSFQSFNTSYTDTGLWGLYMVCEQATVADMLHAVQKEWMRLCTAVSESEVARAKNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVDAEMVREVCTKYIYGKSPAIAALGPIERLPDFNQICSNMRWTR 488
BLAST of CB290532 vs. ExPASy Swiss-Prot
Match: MPPB_BLAEM (Mitochondrial-processing peptidase subunit beta OS=Blastocladiella emersonii GN=MPP1 PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 9.511e-39 Identity = 88/176 (50.00%), Postives = 118/176 (67.05%), Query Frame = -3 Query: 293 VMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKP-DCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASPVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRPYWNRY 817 V AM+GS+++ + G H S+LAQ V + +A S +FNT Y DTGL+G+Y + D LDDLA+ + E +LA SE +V A+ QLK+SLLL +DGT+PVAE+IGRQ+L YGRR+ E+ +D+V VKRVAN FIYDRD+AI A+GP++ LPDYN R RY Sbjct: 291 VASAMIGSYDR-AAGNAHPSSKLAQIVAKHNLANSFTSFNTTYSDTGLWGIYIQSNNRDNLDDLAHFTVREWMRLATAPSEGEVAIAKQQLKTSLLLALDGTTPVAEEIGRQMLAYGRRLSPFEIDRLVDAVTVEDVKRVANEFIYDRDLAIVAVGPVECLPDYNRIRSAMNLLRY 465
BLAST of CB290532 vs. ExPASy Swiss-Prot
Match: MPPB_MOUSE (Mitochondrial-processing peptidase subunit beta OS=Mus musculus GN=Pmpcb PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.242e-38 Identity = 76/174 (43.68%), Postives = 117/174 (67.24%), Query Frame = -3 Query: 296 VMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASPVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRPYWNR 817 V ++G+W+++ GG ++ S+LAQ + S +FNT+Y DTGL+G+Y V + + D+ + + E +L V+E++V RA+N LK+++LL +DG++P+ EDIGRQ+L Y RRIP EL ARID+VDA V+RV ++I+D+ AIAA+GPI+ LPD+N W R Sbjct: 315 VANTLIGNWDRSFGGGMNLSSKLAQLTCHGNLCHSFQSFNTSYTDTGLWGLYMVCEQATVADMLHVVQNEWKRLCTDVTESEVARAKNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVDAETVRRVCTKYIHDKSPAIAALGPIERLPDFNQICSNMRWIR 488
BLAST of CB290532 vs. ExPASy Swiss-Prot
Match: MPPB_PONAB (Mitochondrial-processing peptidase subunit beta OS=Pongo abelii GN=PMPCB PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.622e-38 Identity = 75/174 (43.10%), Postives = 116/174 (66.67%), Query Frame = -3 Query: 296 VMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASPVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRPYWNR 817 V ++G+W+++ GG ++ S+LAQ + S +FNT+Y DTGL+G+Y V +P + D+ + + E +L V+E++V RARN LK+++LL +DG++P+ EDIGRQ+L Y RRIP EL ARID+V+A ++ V ++IY+R AIAA+GPI+ LPD+ W R Sbjct: 315 VANTLIGNWDRSFGGGMNLSSKLAQLTCHGNLCHSFQSFNTSYTDTGLWGLYMVCEPSTVADMLHVVQKEWMRLCTSVTESEVARARNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSPAIAAVGPIEQLPDFKQICSNMCWLR 488
BLAST of CB290532 vs. ExPASy Swiss-Prot
Match: MPPB_BOVIN (Mitochondrial-processing peptidase subunit beta OS=Bos taurus GN=PMPCB PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.622e-38 Identity = 73/172 (42.44%), Postives = 116/172 (67.44%), Query Frame = -3 Query: 302 VMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASPVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRPYW 817 V ++G+W+++ GG ++ S+LAQ + S +FNT+Y DTGL+G+Y V +P + D+ + + E +L V+E++V RA+N LK+++LL +DG++P+ EDIGRQ+L Y RRIP EL ARID+V+A ++ V ++IYD+ A+AA+GPI+ LPD+N W Sbjct: 316 VANTLIGNWDRSFGGGMNLSSKLAQLTCHGNLCHSFQSFNTSYTDTGLWGIYMVCEPATVADMLHVVQKEWMRLCTSVTESEVARAKNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAEIIREVCTKYIYDKSPAVAAVGPIEQLPDFNQICSNMRW 487
BLAST of CB290532 vs. ExPASy Swiss-Prot
Match: MPPB_HUMAN (Mitochondrial-processing peptidase subunit beta OS=Homo sapiens GN=PMPCB PE=1 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 2.119e-38 Identity = 75/174 (43.10%), Postives = 116/174 (66.67%), Query Frame = -3 Query: 296 VMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASPVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRPYWNR 817 V ++G+W+++ GG ++ S+LAQ + S +FNT+Y DTGL+G+Y V + + D+ + + E +L V+E++V RARN LK+++LL +DG++P+ EDIGRQ+L Y RRIP EL ARID+V+A ++ V ++IY+R AIAA+GPI+ LPD+ R W R Sbjct: 315 VANTLIGNWDRSFGGGMNLSSKLAQLTCHGNLCHSFQSFNTSYTDTGLWGLYMVCESSTVADMLHVVQKEWMRLCTSVTESEVARARNLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSPAIAAVGPIKQLPDFKQIRSNMCWLR 488
BLAST of CB290532 vs. ExPASy Swiss-Prot
Match: QCR1_MOUSE (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Mus musculus GN=Uqcrc1 PE=1 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.536e-36 Identity = 72/175 (41.14%), Postives = 110/175 (62.86%), Query Frame = -3 Query: 293 VMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASPVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRPYWNRY 817 V A++G ++ GG H+ S LA N++ +S FN +Y DTGL G + V +DD+ + + + +L +E++VTR +N L+++L+ H+DGT+PV EDIGR LLTYGRRIP AE +RI VDA ++ + +++ YD+ A+A GPI+ LPDYN R +W R+ Sbjct: 306 VANAIIGHYDCTCGGGVHLSSPLASVAVANKLCQSFQTFNISYSDTGLLGAHFVCDAMSIDDMVFFLQGQWMRLCTSATESEVTRGKNILRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIQEVDAQMLRDICSKYFYDQCPAVAGYGPIEQLPDYNRIRSGMFWLRF 480
BLAST of CB290532 vs. ExPASy Swiss-Prot
Match: QCR1_BOVIN (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Bos taurus GN=UQCRC1 PE=1 SV=2) HSP 1 Score: 149.828 bits (377), Expect = 1.679e-35 Identity = 73/175 (41.71%), Postives = 108/175 (61.71%), Query Frame = -3 Query: 293 VMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASPVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRPYWNRY 817 V A++G ++ GG H+ S LA N++ +S FN Y DTGL G + V +DD+ + + + +L +E++V R +N L+++L+ H+DGT+PV EDIGR LLTYGRRIP AE +RI VDA V+ V +++ YD+ A+A GPI+ LPDYN R +W R+ Sbjct: 306 VANAIIGHYDCTYGGGAHLSSPLASIAATNKLCQSFQTFNICYADTGLLGAHFVCDHMSIDDMMFVLQGQWMRLCTSATESEVLRGKNLLRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDARVVREVCSKYFYDQCPAVAGFGPIEQLPDYNRIRSGMFWLRF 480
BLAST of CB290532 vs. ExPASy Swiss-Prot
Match: QCR1_RAT (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus norvegicus GN=Uqcrc1 PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.864e-35 Identity = 72/175 (41.14%), Postives = 110/175 (62.86%), Query Frame = -3 Query: 293 VMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASPVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFRRRPYWNRY 817 V A++G ++ GG H+ S LA N++ +S FN +Y +TGL G + V +DD+ + + + +L +E++VTR +N L+++L+ H+DGT+PV EDIGR LLTYGRRIP AE +RI+ VDA V+ V +++ YD+ A+A GPI+ L DYN R +W R+ Sbjct: 306 VANAIIGHYDCTYGGGVHLSSPLASVAVANKLCQSFQTFNISYSETGLLGAHFVCDAMSIDDMIFFLQGQWMRLCTSATESEVTRGKNILRNALISHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIEEVDAQMVREVCSKYFYDQCPAVAGYGPIEQLSDYNRIRSGMFWLRF 480 The following BLAST results are available for this feature:
BLAST of CB290532 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290532 ID=CB290532; Name=CB290532; organism=Citrus sinensis; type=EST; length=819bpback to top |