CB304385
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304385 vs. ExPASy Swiss-Prot
Match: RL10A_HUMAN (60S ribosomal protein L10a OS=Homo sapiens GN=RPL10A PE=1 SV=2) HSP 1 Score: 154.066 bits (388), Expect = 5.455e-37 Identity = 71/111 (63.96%), Postives = 94/111 (84.68%), Query Frame = -3 Query: 231 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNXXNVRCLYLKSTMGPSSRIF 563 Y AFLASES+IKQIPR+LGPGLNKAGKFP+L+TH E++ +KV+E K+T+KFQ+KKVLC+ VAVG++ M + ++ N+ ++VNFLVSLLKKN NVR LY+KSTMG R++ Sbjct: 107 YDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
BLAST of CB304385 vs. ExPASy Swiss-Prot
Match: RL10A_BOVIN (60S ribosomal protein L10a OS=Bos taurus GN=RPL10A PE=2 SV=3) HSP 1 Score: 154.066 bits (388), Expect = 5.455e-37 Identity = 71/111 (63.96%), Postives = 94/111 (84.68%), Query Frame = -3 Query: 231 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNXXNVRCLYLKSTMGPSSRIF 563 Y AFLASES+IKQIPR+LGPGLNKAGKFP+L+TH E++ +KV+E K+T+KFQ+KKVLC+ VAVG++ M + ++ N+ ++VNFLVSLLKKN NVR LY+KSTMG R++ Sbjct: 107 YDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
BLAST of CB304385 vs. ExPASy Swiss-Prot
Match: RL10A_DICDI (60S ribosomal protein L10a OS=Dictyostelium discoideum GN=rpl10a PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.215e-36 Identity = 67/111 (60.36%), Postives = 93/111 (83.78%), Query Frame = -3 Query: 231 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNXXNVRCLYLKSTMGPSSRIF 563 Y AFLASES+++Q+P+LLGPGLNK GKFPTL+TH E + SK+N+ K+TVKFQLKKVLC+ VAVG++ + E+++ N+ S+NFLVSLLKK N++ LY+K++MGPS R++ Sbjct: 107 YDAFLASESILRQVPKLLGPGLNKVGKFPTLLTHSEDMASKINDVKSTVKFQLKKVLCLAVAVGHIELTEREVATNIIQSINFLVSLLKKGWQNIKTLYVKTSMGPSHRVY 217
BLAST of CB304385 vs. ExPASy Swiss-Prot
Match: RL10A_CAEEL (60S ribosomal protein L10a OS=Caenorhabditis elegans GN=rpl-10a PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.073e-36 Identity = 71/111 (63.96%), Postives = 94/111 (84.68%), Query Frame = -3 Query: 231 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNXXNVRCLYLKSTMGPSSRIF 563 Y AF+ASES+IKQIPR+LGPGLNKAGKFP++VTH ESL+SK +E +ATVKFQ+KKVLC+ VAVG++ + ++++ N+ +S+NFLVSLLKKN NVR L +KSTMG R++ Sbjct: 106 YDAFIASESLIKQIPRILGPGLNKAGKFPSVVTHGESLQSKSDEIRATVKFQMKKVLCLSVAVGHVGLTQEELVSNISLSINFLVSLLKKNWQNVRSLNIKSTMGKPQRVY 216
BLAST of CB304385 vs. ExPASy Swiss-Prot
Match: RL10A_MACFA (60S ribosomal protein L10a OS=Macaca fascicularis GN=RPL10A PE=2 SV=3) HSP 1 Score: 150.214 bits (378), Expect = 7.877e-36 Identity = 69/111 (62.16%), Postives = 93/111 (83.78%), Query Frame = -3 Query: 231 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNXXNVRCLYLKSTMGPSSRIF 563 Y AFLASES+IKQIPR+LGPGLNKAGKFP+ +TH E++ +KV+E K+T+KFQ+K+VLC+ VAVG++ M + ++ N+ ++VNFLVSLLKKN NVR LY+KSTMG R++ Sbjct: 107 YDAFLASESLIKQIPRILGPGLNKAGKFPSPLTHNENMVAKVDEVKSTIKFQMKRVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
BLAST of CB304385 vs. ExPASy Swiss-Prot
Match: RL10A_CHLRE (60S ribosomal protein L10a OS=Chlamydomonas reinhardtii GN=RPL10A PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.755e-35 Identity = 75/111 (67.57%), Postives = 89/111 (80.18%), Query Frame = -3 Query: 231 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNXXNVRCLYLKSTMGPSSRIF 563 YHAFLAS+SVIKQIPRLLGPGLNKAGKFP + ++LE V +TK ++KFQLKKVLCMGVAV N+ M E +I N+ ++NFLVSLLKKN NVRCLY+KSTMG RI+ Sbjct: 105 YHAFLASDSVIKQIPRLLGPGLNKAGKFPAPIN--KNLEEMVLDTKCSIKFQLKKVLCMGVAVANVGMTEGEIRTNIMYAINFLVSLLKKNWQNVRCLYIKSTMGKPIRIY 213
BLAST of CB304385 vs. ExPASy Swiss-Prot
Match: RL10A_NEUCR (60S ribosomal protein L10a OS=Neurospora crassa GN=rpl-10a PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.486e-34 Identity = 68/111 (61.26%), Postives = 90/111 (81.08%), Query Frame = -3 Query: 231 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNXXNVRCLYLKSTMGPSSRIF 563 Y AF+ASE++IKQIPRLLGPGL+KAGKFPT V+H + L K+NE K+T+KFQLKKVLCMGVAVGN+ M ++Q+ N+ +++N+LVSLLKK NV L +K+TM P R++ Sbjct: 107 YDAFVASEALIKQIPRLLGPGLSKAGKFPTPVSHSDDLTGKLNEVKSTIKFQLKKVLCMGVAVGNVGMTQEQLVGNIMLAINYLVSLLKKGWQNVGSLTIKATMSPPKRLY 217
BLAST of CB304385 vs. ExPASy Swiss-Prot
Match: RL10A_ASHGO (60S ribosomal protein L10a OS=Ashbya gossypii GN=RPL10A PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 7.373e-34 Identity = 69/111 (62.16%), Postives = 89/111 (80.18%), Query Frame = -3 Query: 231 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNXXNVRCLYLKSTMGPSSRIF 563 Y+AF+ASE +IKQ+PRLLGP L+KAGKFPT V+H + L SKV + ++T+KFQLKKVLC+ VAVGN+ M+E + + MSVNFLVSLLKKN NV L +KSTMGP+ R++ Sbjct: 107 YNAFIASEVLIKQVPRLLGPQLSKAGKFPTPVSHNDDLYSKVTDVRSTIKFQLKKVLCLAVAVGNVEMDEDTLVNQILMSVNFLVSLLKKNWQNVGSLVIKSTMGPAFRLY 217
BLAST of CB304385 vs. ExPASy Swiss-Prot
Match: RL10A_CANGA (60S ribosomal protein L10a OS=Candida glabrata GN=RPL10A PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.145e-33 Identity = 68/111 (61.26%), Postives = 88/111 (79.28%), Query Frame = -3 Query: 231 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNXXNVRCLYLKSTMGPSSRIF 563 Y+AF+ASE +IKQ+PRLLGP L+KAGKFPT V+H + L KV + ++T+KFQLKKVLC+ VAVGN+ M+E + + MSVNFLVSLLKKN NV L +KSTMGP+ R++ Sbjct: 107 YNAFIASEVLIKQVPRLLGPQLSKAGKFPTPVSHNDDLYGKVTDVRSTIKFQLKKVLCLAVAVGNVEMDEDTLVNQILMSVNFLVSLLKKNWQNVGSLVIKSTMGPAFRLY 217
BLAST of CB304385 vs. ExPASy Swiss-Prot
Match: RL1B_SCHPO (60S ribosomal protein L1-B OS=Schizosaccharomyces pombe GN=rpl1b PE=1 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.802e-33 Identity = 67/111 (60.36%), Postives = 88/111 (79.28%), Query Frame = -3 Query: 231 YHAFLASESVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNXXNVRCLYLKSTMGPSSRIF 563 Y AF+ASE +IKQIPRLLGPGL+KAGKFP+ V+H + L K+ E K+T+KFQLKKVLC+GVAVG++ M E+Q+ N+ ++VNFLVSLLKK N+ L +KSTMG R++ Sbjct: 106 YDAFIASEVLIKQIPRLLGPGLSKAGKFPSPVSHADDLYGKITEVKSTIKFQLKKVLCLGVAVGHVEMSEEQLIANIMLAVNFLVSLLKKGWQNIGSLVVKSTMGKPHRLY 216 The following BLAST results are available for this feature:
BLAST of CB304385 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304385 ID=CB304385; Name=CB304385; organism=Citrus sinensis; type=EST; length=625bpback to top |