CB304622
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304622 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 52.7582 bits (125), Expect = 7.366e-12 Identity = 20/50 (40.00%), Postives = 34/50 (68.00%), Query Frame = -1 Query: 303 PITGTGINPARSLGAAVIYNKDKVWDDQWLFWVGPFIGAAIAAFYHQFIL 452 P G +NPAR+ G A++ + W + W++WVGPFIG A+AA +++++ Sbjct: 200 PFDGASMNPARAFGPALVGWR---WSNHWIYWVGPFIGGALAALIYEYMI 246 HSP 2 Score: 38.1206 bits (87), Expect = 7.366e-12 Identity = 23/44 (52.27%), Postives = 28/44 (63.64%), Query Frame = -2 Query: 476 GLAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAV 604 GL EII TF LVY V+S A DPKR + + ++APL IG V Sbjct: 152 GLLMEIILTFALVYVVYSTAIDPKRGS----IGIIAPLAIGLIV 191
BLAST of CB304622 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 1.242e-11 Identity = 21/50 (42.00%), Postives = 36/50 (72.00%), Query Frame = -1 Query: 303 PITGTGINPARSLGAAVIYNKDKVWDDQWLFWVGPFIGAAIAAFYHQFIL 452 P +G +NPAR+ G A++ + W D W++WVGPFIG+A+AA +++++ Sbjct: 200 PFSGASMNPARAFGPALVGWR---WHDHWIYWVGPFIGSALAALIYEYMV 246 HSP 2 Score: 35.039 bits (79), Expect = 1.242e-11 Identity = 22/44 (50.00%), Postives = 27/44 (61.36%), Query Frame = -2 Query: 476 GLAAEIIGTFVLVYTVFSA-TDPKRSARDSHVPVLAPLPIGFAV 604 GL EII TF LVY V+S DPKR + + ++APL IG V Sbjct: 152 GLVLEIILTFGLVYVVYSTLIDPKRGS----LGIIAPLAIGLIV 191
BLAST of CB304622 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 5.960e-11 Identity = 26/57 (45.61%), Postives = 38/57 (66.67%), Query Frame = -1 Query: 300 GTLATIPITGTGINPARSLGAAVIYNKDKVWDDQWLFWVGPFIGAAIAAFYHQFILR 470 G L I +TG +NPARS G AV+ N +W D W++WVGP +GA +AA ++F+ + Sbjct: 185 GHLCAIKLTGASMNPARSFGPAVVQN---MWIDHWVYWVGPIVGAIVAALLYKFVFK 238 HSP 2 Score: 24.6386 bits (52), Expect = 5.960e-11 Identity = 14/43 (32.56%), Postives = 22/43 (51.16%), Query Frame = -2 Query: 464 EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVH 592 E + TF+LV V +DP R + + APL +G ++ H Sbjct: 148 EALITFILVVVVKGVSDPGR----TDIKGSAPLAVGLSIAAGH 186
BLAST of CB304622 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1) HSP 1 Score: 53.5286 bits (127), Expect = 5.960e-11 Identity = 23/46 (50.00%), Postives = 31/46 (67.39%), Query Frame = -1 Query: 306 GTGINPARSLGAAVIYNKDKVWDDQWLFWVGPFIGAAIAAFYHQFI 443 G +NPA S G AV+ VWD+ W++W+GPF+GAAIAA + I Sbjct: 195 GASMNPAVSFGPAVVTG---VWDNHWVYWLGPFVGAAIAALIYDII 237 HSP 2 Score: 34.2686 bits (77), Expect = 5.960e-11 Identity = 20/40 (50.00%), Postives = 27/40 (67.50%), Query Frame = -2 Query: 476 EIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAV 592 EI+ TF LVYTV+ +A DPK+ + V+AP+ IGF V Sbjct: 148 EIVMTFGLVYTVYATAVDPKK----GDLGVIAPIAIGFIV 183 The following BLAST results are available for this feature:
BLAST of CB304622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304622 ID=CB304622; Name=CB304622; organism=Citrus sinensis; type=EST; length=608bpback to top |