CB304787

Overview
NameCB304787
Unique NameCB304787
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length601
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CB304787 vs. ExPASy Swiss-Prot
Match: RAB7A_DICDI (Ras-related protein Rab-7A OS=Dictyostelium discoideum GN=rab7A PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.250e-11
Identity = 31/44 (70.45%), Postives = 37/44 (84.09%), Query Frame = -1 
Query:  470 LGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDVNVD 601
            LGNKID++  N RVVS+K+A  WC SKGNIPYFETSAKE +NV+
Sbjct:  123 LGNKIDLE--NQRVVSQKRAASWCQSKGNIPYFETSAKEAINVE 164
The following BLAST results are available for this feature:
BLAST of CB304787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
RAB7A_DICDI8.250e-1170.45Ras-related protein Rab-7A OS=Dictyostelium discoi... [more]

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Properties
Property NameValue
Genbank descriptionFLAVEDO0002_IIaR_H04 Flavedo Mature Citrus sinensis cDNA clone FLAVEDO0002_IIaR_H04 3, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB304787 ID=CB304787; Name=CB304787; organism=Citrus sinensis; type=EST; length=601bp
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCNNNNNATAATCTATACCT
CCTTCGAAGTCGGTCGGAGATGATAATATAGCCACCAATGGCTCAAAGAT
GATTAAAACAAATACAAGCATTCGATTCAAAACCAAAAGCAGTACAACAC
AACCCCCGAGTTAAATCTCATCGAGGTACTCTACAACTACAGTTTTAAAT
TATGATCAAGCTTGCCTCAAGTTCTGAGCTTAAGGGGTACAATTTCTACA
AAAAAAAATGGCTATGAATCATGATTGCCAAAATAAAAAATGAAGAATTA
AGCAACAAAATCAACAGCAACTACTCCACTAACTAGTATTGCCTCCAGCT
TAGCATGCACAACCACCTCTTTGCTCATTCTCTGAAGGTGCCTCAGGGAT
ACCCTGGAAATATATGTCTTGTTCACGCTCATTGGCTAGAGCAGCTCTTG
CAATAGACAAGAATGCAGCATCAACATTGACATCCTCCTTTGCTGAGGTC
TCAAAGTAAGGTATGTTGCCTTTGGAAGCACACCAGTCCTTGGCTTTCTT
CTCAGACACCACTCGACTGTTCCCACCATCGATATCAATCTTGTTTCCAA
G
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