CB304787
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB304787 vs. ExPASy Swiss-Prot
Match: RAB7_VIGAC (Ras-related protein Rab7 OS=Vigna aconitifolia PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.088e-30 Identity = 67/84 (79.76%), Postives = 67/84 (79.76%), Query Frame = -1 Query: 353 LGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDVNVDXXXXXXXXXXXANEREQDIYFQGIPEAP-SENEQRGGCAC 601 LGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKED NVD ANE EQDIYFQGIPEA ENEQR GCAC Sbjct: 123 LGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDFNVDAAFLCIAKAALANEHEQDIYFQGIPEAAVPENEQRSGCAC 206
BLAST of CB304787 vs. ExPASy Swiss-Prot
Match: RAB7_SOYBN (Ras-related protein Rab7 OS=Glycine max PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.652e-30 Identity = 66/84 (78.57%), Postives = 67/84 (79.76%), Query Frame = -1 Query: 353 LGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDVNVDXXXXXXXXXXXANEREQDIYFQGIPEAP-SENEQRGGCAC 601 LGNKIDIDGGNSRVVSEKKAKDWCA+KGNIPYFETSAKED NVD ANE EQDIYFQGIPEA ENEQR GCAC Sbjct: 123 LGNKIDIDGGNSRVVSEKKAKDWCAAKGNIPYFETSAKEDYNVDAAFLCIAKAALANEHEQDIYFQGIPEAAVPENEQRSGCAC 206
BLAST of CB304787 vs. ExPASy Swiss-Prot
Match: RAB7_ARATH (Ras-related protein Rab7 OS=Arabidopsis thaliana GN=RAB7 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.549e-25 Identity = 58/83 (69.88%), Postives = 63/83 (75.90%), Query Frame = -1 Query: 353 LGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDVNVDXXXXXXXXXXXANEREQDIYFQGIPEAPSENEQRGGCAC 601 LGNK+DIDGGNSRVVSEKKA++WCA KGNI YFETSAKED NVD ANER+QDIYFQ P+ S EQRGGCAC Sbjct: 123 LGNKVDIDGGNSRVVSEKKAREWCAEKGNIVYFETSAKEDYNVDDSFLCITKLALANERDQDIYFQ--PDTGSVPEQRGGCAC 203
BLAST of CB304787 vs. ExPASy Swiss-Prot
Match: RAB7_PRUAR (Ras-related protein Rab7 OS=Prunus armeniaca PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 9.723e-20 Identity = 52/85 (61.18%), Postives = 56/85 (65.88%), Query Frame = -1 Query: 353 LGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDVNVDXXXXXXXXXXXANEREQDIYF-QGIPEAPSENEQR-GGCAC 601 LGNKID+DGGNSRVVSEKKAK WCASKGNIPYFETSAKE NVD NE E++IY I A +QR GC C Sbjct: 123 LGNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDDAFQCIAKNALNNEPEEEIYLPDTIDVAGGGRQQRSSGCEC 207
BLAST of CB304787 vs. ExPASy Swiss-Prot
Match: RAB7_GOSHI (Ras-related protein Rab7 OS=Gossypium hirsutum GN=RAB7 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.270e-19 Identity = 51/85 (60.00%), Postives = 56/85 (65.88%), Query Frame = -1 Query: 353 LGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDVNVDXXXXXXXXXXXANEREQDIYF-QGIPEAPSENEQRG-GCAC 601 LGNK+D+DGGNSRVVSEKKAK WCASKGNIPYFETSAKE NVD NE E++IY + I A QR GC C Sbjct: 123 LGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECIARNALKNEPEEEIYLPETIDVASGGRPQRSTGCEC 207
BLAST of CB304787 vs. ExPASy Swiss-Prot
Match: RAB7_CENCI (Ras-related protein Rab7 OS=Cenchrus ciliaris PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.395e-18 Identity = 44/83 (53.01%), Postives = 52/83 (62.65%), Query Frame = -1 Query: 353 LGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDVNVDXXXXXXXXXXXANEREQDIYFQGIPEAPSENEQRGGCAC 601 LGNK+D+DGGNSRVVSEKKAK WCASKGNIPYFETSAKE NV+ NE E+++Y + N + C Sbjct: 123 LGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGTNVEDAFQCIVKNALKNEPEEELYVPDTVDVVGGNRAQRSSGC 205
BLAST of CB304787 vs. ExPASy Swiss-Prot
Match: RAB7_PEA (Ras-related protein Rab7 OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.968e-18 Identity = 43/84 (51.19%), Postives = 56/84 (66.67%), Query Frame = -1 Query: 353 LGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDVNVDXXXXXXXXXXXANEREQDIYFQGIPEAPSENEQRG-GCAC 601 +GNKIDIDGGNSRVVSEKKA+ WCA+KGNIPYFETSAKE +NV+ + E+++Y + + ++ R GC C Sbjct: 123 IGNKIDIDGGNSRVVSEKKARAWCAAKGNIPYFETSAKEGINVEEAFQTIAKDALKSGEEEELYLPDTIDVGNSSQPRSTGCEC 206
BLAST of CB304787 vs. ExPASy Swiss-Prot
Match: YPTC5_CHLRE (GTP-binding protein YPTC5 OS=Chlamydomonas reinhardtii GN=YPTC5 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 7.704e-17 Identity = 45/86 (52.33%), Postives = 58/86 (67.44%), Query Frame = -1 Query: 359 LGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDVNVDXXXXXXXXXXXANEREQDIYFQGIPEAPSEN-----EQRGGC 601 LGNKID +GG+SR VSEKKAK WCASKG+IPYFETSAKED+NV+ NE+E++++ +P+A N +R GC Sbjct: 123 LGNKIDENGGSSRQVSEKKAKAWCASKGSIPYFETSAKEDINVEAAFTCITRNALRNEKEEELF---MPDAVDMNTTATQRKRAGC 205
BLAST of CB304787 vs. ExPASy Swiss-Prot
Match: RAB7_MESCR (Ras-related protein Rab7A OS=Mesembryanthemum crystallinum PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.242e-16 Identity = 41/83 (49.40%), Postives = 49/83 (59.04%), Query Frame = -1 Query: 353 LGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDVNVDXXXXXXXXXXXANEREQDIYFQGIPEAPSENEQRGGCAC 601 LGNKID+DGG+ RVVSEKKAK WC SKGNIPYFETSAK+ NV+ NE E++ Y + + AC Sbjct: 123 LGNKIDVDGGSGRVVSEKKAKAWCMSKGNIPYFETSAKDGTNVEEAFQCIAKNAIQNEPEEETYLPDTIDMAGSTRPQSSSAC 205
BLAST of CB304787 vs. ExPASy Swiss-Prot
Match: YPTV5_VOLCA (GTP-binding protein yptV5 OS=Volvox carteri GN=YPTV5 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.230e-14 Identity = 44/86 (51.16%), Postives = 56/86 (65.12%), Query Frame = -1 Query: 359 LGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDVNVDXXXXXXXXXXXANEREQDIYFQGIPEAPSEN-----EQRGGC 601 LGNKID G N R V+EKKAK WCASKG+IPYFETSAKED+NV+ NE+E++++ +P+A N +RGGC Sbjct: 123 LGNKIDEVGVN-RQVTEKKAKAWCASKGSIPYFETSAKEDINVEAAFTCITRNALRNEKEEELF---VPDAVDMNTSATQRKRGGC 204 The following BLAST results are available for this feature:
BLAST of CB304787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CB304787 ID=CB304787; Name=CB304787; organism=Citrus sinensis; type=EST; length=601bpback to top |