CB322142
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB322142 vs. ExPASy Swiss-Prot
Match: ATPB_SHESM (ATP synthase subunit beta OS=Shewanella sp. (strain MR-4) GN=atpD PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 5.596e-51 Identity = 98/136 (72.06%), Postives = 115/136 (84.56%), Query Frame = 2 Query: 2 LSRGLVAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKA 409 LSR + + GIYPAVDPLDSTS L P +VG+EHY+ A V+ LQRYKEL+DIIAILG+DELS++D++TV+RARKIERFLSQPF VAEVFTGSPGKYV L +TIRGFK ILSGE D +PEQAFY+VG+IDE KA Sbjct: 324 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVANGVQTVLQRYKELKDIIAILGMDELSDDDKMTVSRARKIERFLSQPFHVAEVFTGSPGKYVSLKDTIRGFKGILSGEFDHIPEQAFYMVGSIDEAVEKA 459
BLAST of CB322142 vs. ExPASy Swiss-Prot
Match: ATPB_SHEON (ATP synthase subunit beta OS=Shewanella oneidensis GN=atpD PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 5.596e-51 Identity = 98/136 (72.06%), Postives = 115/136 (84.56%), Query Frame = 2 Query: 2 LSRGLVAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKA 409 LSR + + GIYPAVDPLDSTS L P +VG+EHY+ A V+ LQRYKEL+DIIAILG+DELS++D++TV+RARKIERFLSQPF VAEVFTGSPGKYV L +TIRGFK ILSGE D +PEQAFY+VG+IDE KA Sbjct: 324 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVANGVQTVLQRYKELKDIIAILGMDELSDDDKMTVSRARKIERFLSQPFHVAEVFTGSPGKYVSLKDTIRGFKGILSGEFDHIPEQAFYMVGSIDEAVEKA 459
BLAST of CB322142 vs. ExPASy Swiss-Prot
Match: ATPB_SHELP (ATP synthase subunit beta OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=atpD PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 5.596e-51 Identity = 96/136 (70.59%), Postives = 115/136 (84.56%), Query Frame = 2 Query: 2 LSRGLVAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKA 409 LSR + + GIYPAVDPLDSTS L P++VG+EHY+ A V+ LQRYKEL+DIIAILG+DELS+ED+ TVARARKIE++LSQPFFVAEVFTGSPGKYV L +TIRGFK +L GE D +PEQAFY+ G+IDEV +A Sbjct: 320 LSRNIASLGIYPAVDPLDSTSRQLDPQVVGQEHYDVASGVQNVLQRYKELKDIIAILGMDELSDEDKTTVARARKIEKYLSQPFFVAEVFTGSPGKYVALKDTIRGFKGLLEGEFDHIPEQAFYMAGSIDEVIERA 455
BLAST of CB322142 vs. ExPASy Swiss-Prot
Match: ATPB_MARMM (ATP synthase subunit beta OS=Maricaulis maris (strain MCS10) GN=atpD PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 5.596e-51 Identity = 99/143 (69.23%), Postives = 118/143 (82.52%), Query Frame = 2 Query: 2 LSRGLVAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKATNLEMES 430 L+R + KGIYPAVDPLDSTS +L+PRIVGEEHY TA+RV++ LQRYK LQDIIAILG+DELSEED+LTVARARK+ERFLSQPF VAE+FTGSPG V +A+T++GFK I GE D LPE AFY+VG I++ KA L E+ Sbjct: 336 LNRAISEKGIYPAVDPLDSTSRILEPRIVGEEHYGTARRVQEILQRYKALQDIIAILGMDELSEEDKLTVARARKVERFLSQPFDVAEIFTGSPGIQVPVADTVKGFKAICDGEYDHLPEAAFYMVGTIEDAVKKAEKLAAEA 478
BLAST of CB322142 vs. ExPASy Swiss-Prot
Match: ATPB_AZOSE (ATP synthase subunit beta OS=Azoarcus sp. (strain EbN1) GN=atpD PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 5.596e-51 Identity = 99/140 (70.71%), Postives = 116/140 (82.86%), Query Frame = 2 Query: 2 LSRGLVAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKATNLE 421 LSR + A GIYPAVDPLDSTS L P +VGEEHY A++V+ TLQRYKEL+DIIAILG+DELS ED+L V+RARKI+RFLSQPF VAEVFTGSPGKYV L +TI GFK+I++GE D LPEQAFY+VG I+E KA L+ Sbjct: 327 LSRDIAALGIYPAVDPLDSTSRQLDPLVVGEEHYNVARQVQVTLQRYKELRDIIAILGMDELSPEDKLAVSRARKIQRFLSQPFHVAEVFTGSPGKYVPLKDTINGFKMIVNGECDHLPEQAFYMVGGIEEAMEKAKKLQ 466
BLAST of CB322142 vs. ExPASy Swiss-Prot
Match: ATPB_RHILO (ATP synthase subunit beta OS=Rhizobium loti GN=atpD PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 7.309e-51 Identity = 99/143 (69.23%), Postives = 116/143 (81.12%), Query Frame = 2 Query: 2 LSRGLVAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKATNLEMES 430 L+R + KGIYPAVDPLDSTS ML P +VGEEHY A++V+ LQRYK LQDIIAILG+DELSEED+ TVARARKIERFLSQPFFVAEVFTG+PGK V LA+TI+GFK + +G+ D LPE AFY+VG I+E KA L E+ Sbjct: 334 LNRAIAEKGIYPAVDPLDSTSRMLDPMVVGEEHYAVARQVQSILQRYKSLQDIIAILGMDELSEEDKQTVARARKIERFLSQPFFVAEVFTGAPGKLVDLADTIKGFKGLCNGDYDHLPEAAFYMVGGIEEAVEKAQRLAAEA 476
BLAST of CB322142 vs. ExPASy Swiss-Prot
Match: ATPB_NITOC (ATP synthase subunit beta OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=atpD PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 7.309e-51 Identity = 101/139 (72.66%), Postives = 114/139 (82.01%), Query Frame = 2 Query: 2 LSRGLVAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKATNL 418 LSR + GIYPAVDPLDSTS L P IVG+EHY+ A+ V+ LQRYKEL+DIIAILG+DELSEED+LTV+RARKI+RFLSQPFFVAEVFTGSPGKYV L ETI+ FK I+ GE D LPEQAFY+VG IDE KA L Sbjct: 320 LSRQIAELGIYPAVDPLDSTSRQLDPLIVGQEHYQVARAVQGNLQRYKELKDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFFVAEVFTGSPGKYVPLKETIQSFKGIVEGEYDHLPEQAFYMVGTIDEAVEKAKKL 458
BLAST of CB322142 vs. ExPASy Swiss-Prot
Match: ATPB_PSEMY (ATP synthase subunit beta OS=Pseudomonas mendocina (strain ymp) GN=atpD PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 9.546e-51 Identity = 98/139 (70.50%), Postives = 114/139 (82.01%), Query Frame = 2 Query: 2 LSRGLVAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKATNL 418 LSR + + GIYPAVDPLDSTS L P ++G+EHYETA+ V+ LQRYKEL+DIIAILG+DELSE+D+L VARARKI+RFLSQPFFVAEVFTG+PGKYV L +TI GF IL G+ D LPEQAFY+VG IDE KA L Sbjct: 320 LSRDIASLGIYPAVDPLDSTSRQLDPNVIGQEHYETARGVQYVLQRYKELKDIIAILGMDELSEDDKLLVARARKIQRFLSQPFFVAEVFTGAPGKYVSLKDTIAGFSGILKGDYDHLPEQAFYMVGGIDEAIEKAKKL 458
BLAST of CB322142 vs. ExPASy Swiss-Prot
Match: ATPB_NOVAD (ATP synthase subunit beta OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=atpD PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 9.546e-51 Identity = 97/143 (67.83%), Postives = 117/143 (81.82%), Query Frame = 2 Query: 2 LSRGLVAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKATNLEMES 430 L+R + GIYPAVDPLDSTS +L P +VG+EHYETA+RV++TLQ+YK LQDIIAILG+DELSEED+LTVARARKI+RFLSQPF VAEVFTG PGK+V + +T+R FK ++ GE D LPE AFY+VG IDE KA L E+ Sbjct: 339 LNRAISELGIYPAVDPLDSTSRVLTPAVVGQEHYETARRVQETLQKYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFHVAEVFTGIPGKFVQVEDTVRSFKAVVDGEYDHLPEAAFYMVGGIDEAVEKAKKLAAEA 481
BLAST of CB322142 vs. ExPASy Swiss-Prot
Match: ATPB_DICNV (ATP synthase subunit beta OS=Dichelobacter nodosus (strain VCS1703A) GN=atpD PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 9.546e-51 Identity = 97/142 (68.31%), Postives = 116/142 (81.69%), Query Frame = 2 Query: 2 LSRGLVAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKATNLEME 427 LSR + GIYPAVDPLDSTS L P +VGEEHY TA+RV+ LQRYKEL+DIIAILG+DELSE+D+ V RARK++RFLSQPFFVAEVFTG+PGKYV L +TIR FK I+ GE D LPEQAFY+VG+++E AKA ++ E Sbjct: 320 LSRQIAELGIYPAVDPLDSTSRQLDPLVVGEEHYSTARRVQGVLQRYKELRDIIAILGMDELSEDDKAVVTRARKVQRFLSQPFFVAEVFTGAPGKYVPLKDTIRDFKAIVDGEYDHLPEQAFYMVGSMEEAVAKAEKMQAE 461 The following BLAST results are available for this feature:
BLAST of CB322142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322142 ID=CB322142; Name=CB322142; organism=Citrus sinensis; type=EST; length=460bpback to top |