CB322142
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB322142 vs. ExPASy Swiss-Prot
Match: ATPB_CITSI (ATP synthase subunit beta, chloroplastic OS=Citrus sinensis GN=atpB PE=3 SV=1) HSP 1 Score: 284.263 bits (726), Expect = 1.728e-76 Identity = 146/147 (99.32%), Postives = 146/147 (99.32%), Query Frame = 2 Query: 2 LSRGLVAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKATNLEMESNLKK 442 LSRGL AKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKATNLEMESNLKK Sbjct: 352 LSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKATNLEMESNLKK 498
BLAST of CB322142 vs. ExPASy Swiss-Prot
Match: ATPB_CUCSA (ATP synthase subunit beta, chloroplastic OS=Cucumis sativus GN=atpB PE=3 SV=2) HSP 1 Score: 282.722 bits (722), Expect = 5.026e-76 Identity = 145/147 (98.64%), Postives = 145/147 (98.64%), Query Frame = 2 Query: 2 LSRGLVAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKATNLEMESNLKK 442 LSRGL AKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDE TAKATNLEMESNLKK Sbjct: 352 LSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEATAKATNLEMESNLKK 498
BLAST of CB322142 vs. ExPASy Swiss-Prot
Match: ATPB_SOYBN (ATP synthase subunit beta, chloroplastic OS=Glycine max GN=atpB PE=3 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 2.495e-75 Identity = 144/147 (97.96%), Postives = 144/147 (97.96%), Query Frame = 2 Query: 2 LSRGLVAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKATNLEMESNLKK 442 LSRGL AKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYV LAETIRGFKLILSGELDGLPEQAFYLVGNIDE TAKATNLEMESNLKK Sbjct: 352 LSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVSLAETIRGFKLILSGELDGLPEQAFYLVGNIDEATAKATNLEMESNLKK 498
BLAST of CB322142 vs. ExPASy Swiss-Prot
Match: ATPB_GOSHI (ATP synthase subunit beta, chloroplastic OS=Gossypium hirsutum GN=atpB PE=3 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 2.495e-75 Identity = 144/147 (97.96%), Postives = 144/147 (97.96%), Query Frame = 2 Query: 2 LSRGLVAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKATNLEMESNLKK 442 LSRGL AKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDE TAKATNLEMES LKK Sbjct: 352 LSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEATAKATNLEMESKLKK 498
BLAST of CB322142 vs. ExPASy Swiss-Prot
Match: ATPB_EUCGG (ATP synthase subunit beta, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=atpB PE=3 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 2.495e-75 Identity = 144/147 (97.96%), Postives = 144/147 (97.96%), Query Frame = 2 Query: 2 LSRGLVAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKATNLEMESNLKK 442 LSRGL AKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDE TAKATNLEMES LKK Sbjct: 352 LSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEATAKATNLEMESKLKK 498
BLAST of CB322142 vs. ExPASy Swiss-Prot
Match: ATPB_PANGI (ATP synthase subunit beta, chloroplastic OS=Panax ginseng GN=atpB PE=3 SV=1) HSP 1 Score: 278.87 bits (712), Expect = 7.258e-75 Identity = 143/147 (97.28%), Postives = 144/147 (97.96%), Query Frame = 2 Query: 2 LSRGLVAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKATNLEMESNLKK 442 LSRGL AKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGF+LILSGELDGLPEQAFYLVGNIDE TAKA NLEMESNLKK Sbjct: 352 LSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFQLILSGELDGLPEQAFYLVGNIDEATAKAMNLEMESNLKK 498
BLAST of CB322142 vs. ExPASy Swiss-Prot
Match: ATPB_GOSBA (ATP synthase subunit beta, chloroplastic OS=Gossypium barbadense GN=atpB PE=3 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 9.480e-75 Identity = 143/147 (97.28%), Postives = 143/147 (97.28%), Query Frame = 2 Query: 2 LSRGLVAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKATNLEMESNLKK 442 LSRGL AKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRY ELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDE TAKATNLEMES LKK Sbjct: 352 LSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYNELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEATAKATNLEMESKLKK 498
BLAST of CB322142 vs. ExPASy Swiss-Prot
Match: ATPB_CARPA (ATP synthase subunit beta, chloroplastic OS=Carica papaya GN=atpB PE=3 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 1.238e-74 Identity = 143/147 (97.28%), Postives = 143/147 (97.28%), Query Frame = 2 Query: 2 LSRGLVAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKATNLEMESNLKK 442 LSRGL AKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDE TAKAT LEMES LKK Sbjct: 352 LSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEATAKATQLEMESKLKK 498
BLAST of CB322142 vs. ExPASy Swiss-Prot
Match: ATPB_POPTR (ATP synthase subunit beta, chloroplastic OS=Populus trichocarpa GN=atpB PE=3 SV=1) HSP 1 Score: 277.715 bits (709), Expect = 1.617e-74 Identity = 142/147 (96.60%), Postives = 144/147 (97.96%), Query Frame = 2 Query: 2 LSRGLVAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKATNLEMESNLKK 442 LSRGL AKGIYPAVDPLDSTSTMLQP+IVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELD LPEQAFYLVGNIDE TAKATNLEME+NLKK Sbjct: 352 LSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDSLPEQAFYLVGNIDEATAKATNLEMENNLKK 498
BLAST of CB322142 vs. ExPASy Swiss-Prot
Match: ATPB_POPTM (ATP synthase subunit beta, chloroplastic OS=Populus tremuloides GN=atpB PE=3 SV=1) HSP 1 Score: 277.715 bits (709), Expect = 1.617e-74 Identity = 142/147 (96.60%), Postives = 144/147 (97.96%), Query Frame = 2 Query: 2 LSRGLVAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKATNLEMESNLKK 442 LSRGL AKGIYPAVDPLDSTSTMLQP+IVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELD LPEQAFYLVGNIDE TAKATNLEME+NLKK Sbjct: 352 LSRGLAAKGIYPAVDPLDSTSTMLQPQIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDSLPEQAFYLVGNIDEATAKATNLEMENNLKK 498 The following BLAST results are available for this feature:
BLAST of CB322142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322142 ID=CB322142; Name=CB322142; organism=Citrus sinensis; type=EST; length=460bpback to top |