CB322142
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB322142 vs. ExPASy Swiss-Prot
Match: ATPB_THEYD (ATP synthase subunit beta OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=atpD PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 3.627e-50 Identity = 96/139 (69.06%), Postives = 116/139 (83.45%), Query Frame = 2 Query: 2 LSRGLVAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKATNL 418 LSR + GIYPAVDPLDSTS +L PR+VG+EHY+ A+ V+ LQRYKELQDIIAILG++ELSE+D+LTVARARK++RFLSQPF VAE FTG+PGKYV L +TI+GFK IL G+ D LPEQAFY+VG I+EV KA + Sbjct: 329 LSRQIAELGIYPAVDPLDSTSRILDPRVVGDEHYQVARGVQSVLQRYKELQDIIAILGIEELSEDDKLTVARARKLQRFLSQPFHVAETFTGTPGKYVKLEDTIKGFKAILDGKYDDLPEQAFYMVGPIEEVEEKAKKM 467
BLAST of CB322142 vs. ExPASy Swiss-Prot
Match: ATPB_SHEAM (ATP synthase subunit beta OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=atpD PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 3.627e-50 Identity = 96/136 (70.59%), Postives = 114/136 (83.82%), Query Frame = 2 Query: 2 LSRGLVAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKA 409 LSR + + GIYPAVDPLDSTS L P +VG+EHY+ A V+ LQRYKEL+DIIAILG+DELS++D++TV+RARKIERFLSQPF VAEVFTGSPGKYV L +TIRGFK IL GE D +PEQAFY+VG++DE KA Sbjct: 324 LSRQIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVANGVQNVLQRYKELKDIIAILGMDELSDDDKMTVSRARKIERFLSQPFHVAEVFTGSPGKYVPLKDTIRGFKGILEGEFDHVPEQAFYMVGSVDEAVEKA 459
BLAST of CB322142 vs. ExPASy Swiss-Prot
Match: ATPB_PSEF5 (ATP synthase subunit beta OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=atpD PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 3.627e-50 Identity = 98/139 (70.50%), Postives = 113/139 (81.29%), Query Frame = 2 Query: 2 LSRGLVAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKATNL 418 LSR + + GIYPAVDPLDSTS L P ++G EHYETA+ V+ LQRYKEL+DIIAILG+DELSE D+ V+RARKI+RFLSQPFFVAEVFTGSPGKYV L +TI GFK IL+G+ D LPEQAFY+VG IDE KA L Sbjct: 320 LSRDIASLGIYPAVDPLDSTSRQLDPNVIGNEHYETARGVQYVLQRYKELKDIIAILGMDELSETDKQLVSRARKIQRFLSQPFFVAEVFTGSPGKYVSLKDTIAGFKGILNGDYDHLPEQAFYMVGGIDEAIEKAKKL 458
BLAST of CB322142 vs. ExPASy Swiss-Prot
Match: ATPB_PSEAE (ATP synthase subunit beta OS=Pseudomonas aeruginosa GN=atpD PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 3.627e-50 Identity = 97/139 (69.78%), Postives = 115/139 (82.73%), Query Frame = 2 Query: 2 LSRGLVAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKATNL 418 LSR + + GIYPAVDPLDSTS L P ++G++HY+TA+ V+ LQRYKEL+DIIAILG+DELSE D+L VARARKI+RFLSQPFFVAEVFTGSPGKYV L +TI GFK IL+G+ D LPEQAFY+VG I+E KA L Sbjct: 320 LSRDIASLGIYPAVDPLDSTSRQLDPLVIGQDHYDTARGVQYVLQRYKELKDIIAILGMDELSEADKLLVARARKIQRFLSQPFFVAEVFTGSPGKYVSLKDTIAGFKGILNGDYDHLPEQAFYMVGGIEEAVEKAKKL 458
BLAST of CB322142 vs. ExPASy Swiss-Prot
Match: ATPB_PSEAB (ATP synthase subunit beta OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=atpD PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 3.627e-50 Identity = 97/139 (69.78%), Postives = 115/139 (82.73%), Query Frame = 2 Query: 2 LSRGLVAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKATNL 418 LSR + + GIYPAVDPLDSTS L P ++G++HY+TA+ V+ LQRYKEL+DIIAILG+DELSE D+L VARARKI+RFLSQPFFVAEVFTGSPGKYV L +TI GFK IL+G+ D LPEQAFY+VG I+E KA L Sbjct: 320 LSRDIASLGIYPAVDPLDSTSRQLDPLVIGQDHYDTARGVQYVLQRYKELKDIIAILGMDELSEADKLLVARARKIQRFLSQPFFVAEVFTGSPGKYVSLKDTIAGFKGILNGDYDHLPEQAFYMVGGIEEAVEKAKKL 458
BLAST of CB322142 vs. ExPASy Swiss-Prot
Match: ATPB_PSEA8 (ATP synthase subunit beta OS=Pseudomonas aeruginosa (strain LESB58) GN=atpD PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 3.627e-50 Identity = 97/139 (69.78%), Postives = 115/139 (82.73%), Query Frame = 2 Query: 2 LSRGLVAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKATNL 418 LSR + + GIYPAVDPLDSTS L P ++G++HY+TA+ V+ LQRYKEL+DIIAILG+DELSE D+L VARARKI+RFLSQPFFVAEVFTGSPGKYV L +TI GFK IL+G+ D LPEQAFY+VG I+E KA L Sbjct: 320 LSRDIASLGIYPAVDPLDSTSRQLDPLVIGQDHYDTARGVQYVLQRYKELKDIIAILGMDELSEADKLLVARARKIQRFLSQPFFVAEVFTGSPGKYVSLKDTIAGFKGILNGDYDHLPEQAFYMVGGIEEAVEKAKKL 458
BLAST of CB322142 vs. ExPASy Swiss-Prot
Match: ATPB_PSEA7 (ATP synthase subunit beta OS=Pseudomonas aeruginosa (strain PA7) GN=atpD PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 3.627e-50 Identity = 97/139 (69.78%), Postives = 115/139 (82.73%), Query Frame = 2 Query: 2 LSRGLVAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKATNL 418 LSR + + GIYPAVDPLDSTS L P ++G++HY+TA+ V+ LQRYKEL+DIIAILG+DELSE D+L VARARKI+RFLSQPFFVAEVFTGSPGKYV L +TI GFK IL+G+ D LPEQAFY+VG I+E KA L Sbjct: 320 LSRDIASLGIYPAVDPLDSTSRQLDPLVIGQDHYDTARGVQYVLQRYKELKDIIAILGMDELSEADKLLVARARKIQRFLSQPFFVAEVFTGSPGKYVSLKDTIAGFKGILNGDYDHLPEQAFYMVGGIEEAVEKAKKL 458
BLAST of CB322142 vs. ExPASy Swiss-Prot
Match: ATPB_NAUPA (ATP synthase subunit beta OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=atpD PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 3.627e-50 Identity = 96/143 (67.13%), Postives = 120/143 (83.92%), Query Frame = 2 Query: 2 LSRGLVAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKATNLEMES 430 L+R + KGIYPAVDPLDSTS +L P+IVGEEHY A+ V++ LQ+YK+LQDIIAILG+DELSEED+LTVARARKIE+FLSQPFFVA+VFTG+ G+YV L +TI GFK IL G++D LPE AFY+VG++DE KA ++ +S Sbjct: 326 LNRKIAEKGIYPAVDPLDSTSRILDPQIVGEEHYRVARGVQEVLQKYKDLQDIIAILGMDELSEEDKLTVARARKIEKFLSQPFFVAKVFTGADGRYVELDKTIAGFKEILEGKVDDLPENAFYMVGDLDEAKEKAEKMKAQS 468
BLAST of CB322142 vs. ExPASy Swiss-Prot
Match: ATPB_SERP5 (ATP synthase subunit beta OS=Serratia proteamaculans (strain 568) GN=atpD PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 4.738e-50 Identity = 96/139 (69.06%), Postives = 115/139 (82.73%), Query Frame = 2 Query: 2 LSRGLVAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKATNL 418 LSR + + GIYPAVDPLDSTS L P +VG+EHY+ A+ V+ LQRY+EL+DIIAILG+DELSEED+L V+RARKI+RFLSQPFFVAEVFTGSPGK+V L +TIRGFK I+ G+ D LPEQAFY+VG I+E KA L Sbjct: 322 LSRNIASLGIYPAVDPLDSTSRQLDPLVVGQEHYDVARGVQSILQRYQELKDIIAILGMDELSEEDKLVVSRARKIQRFLSQPFFVAEVFTGSPGKFVSLKDTIRGFKGIMDGDYDHLPEQAFYMVGTIEEAVEKAKKL 460
BLAST of CB322142 vs. ExPASy Swiss-Prot
Match: ATPB_PELPB (ATP synthase subunit beta OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=atpD PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 4.738e-50 Identity = 97/139 (69.78%), Postives = 113/139 (81.29%), Query Frame = 2 Query: 2 LSRGLVAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEVTAKATNL 418 LSR + GIYPAVDPLDSTS +L P IVG++HY+TAQ VKQ LQRYK+LQDIIAILG+DELS+ED+L V+RARK++RFLSQPFFVAE FTG GKYV L ETI+GFK I++G D LPE AFYLVG I+E KA L Sbjct: 324 LSRSIAELGIYPAVDPLDSTSRILDPNIVGDDHYDTAQAVKQLLQRYKDLQDIIAILGMDELSDEDKLVVSRARKVQRFLSQPFFVAEAFTGLAGKYVKLEETIKGFKEIIAGRHDNLPESAFYLVGTIEEAVEKAKTL 462 The following BLAST results are available for this feature:
BLAST of CB322142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CB322142 ID=CB322142; Name=CB322142; organism=Citrus sinensis; type=EST; length=460bpback to top |