CF417087
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417087 vs. ExPASy Swiss-Prot
Match: LTP1_MORNI (Non-specific lipid-transfer protein 1 OS=Morus nigra PE=1 SV=1) HSP 1 Score: 51.2174 bits (121), Expect = 3.248e-13 Identity = 26/55 (47.27%), Postives = 36/55 (65.45%), Query Frame = 3 Query: 15 QVTASLXPCIPFLKTGGRFSPPPCCXGVQSLNGADXNXPPXRRAACNCLETSLRN 179 QV++SL PCI +L+ GG P CC GV+SLN A R+AACNCL+++ + Sbjct: 5 QVSSSLAPCINYLRAGG-VVPANCCNGVRSLNNA-AKTTADRQAACNCLKSAFNS 57 HSP 2 Score: 44.2838 bits (103), Expect = 3.248e-13 Identity = 18/32 (56.25%), Postives = 24/32 (75.00%), Query Frame = 1 Query: 163 KRAYGTIRGIKPNVAAGLPSXCGVRIPYXISP 258 K A+ +I+G+ N+AAGLP CGV +PY ISP Sbjct: 52 KSAFNSIKGLNLNLAAGLPGKCGVSVPYKISP 83
BLAST of CF417087 vs. ExPASy Swiss-Prot
Match: NLTP_HELAN (Non-specific lipid-transfer protein OS=Helianthus annuus PE=3 SV=1) HSP 1 Score: 54.299 bits (129), Expect = 6.808e-13 Identity = 27/52 (51.92%), Postives = 35/52 (67.31%), Query Frame = 3 Query: 15 QVTASLXPCIPFLKTGGRFSPPPCCXGVQSLNGADXNXPPXRRAACNCLETS 170 QV++SL PCI +L GG PP CC GV+SLN A P R+AAC CL+++ Sbjct: 30 QVSSSLAPCISYLTKGGAV-PPACCSGVKSLNSA-AKTTPDRQAACGCLKSA 79 HSP 2 Score: 38.5058 bits (88), Expect = 6.808e-13 Identity = 17/32 (53.12%), Postives = 19/32 (59.38%), Query Frame = 1 Query: 163 KRAYGTIRGIKPNVAAGLPSXCGVRIPYXISP 258 K AY +I G+ AA P CGV IPY ISP Sbjct: 77 KSAYNSISGVNAGNAASFPGKCGVSIPYKISP 108 HSP 3 Score: 21.1718 bits (43), Expect = 6.808e-13 Identity = 7/10 (70.00%), Postives = 10/10 (100.00%), Query Frame = 2 Query: 254 APSTDCSRVR 283 +PSTDCS+V+ Sbjct: 107 SPSTDCSKVQ 116
BLAST of CF417087 vs. ExPASy Swiss-Prot
Match: NLTP_MALDO (Non-specific lipid-transfer protein OS=Malus domestica GN=MALD3 PE=1 SV=1) HSP 1 Score: 51.2174 bits (121), Expect = 1.203e-12 Identity = 23/50 (46.00%), Postives = 34/50 (68.00%), Query Frame = 3 Query: 15 QVTASLXPCIPFLKTGGRFSPPPCCXGVQSLNGADXNXPPXRRAACNCLE 164 QVT+SL PCI ++++GG PP CC G++++NG R+ ACNCL+ Sbjct: 29 QVTSSLAPCIGYVRSGGAV-PPACCNGIRTINGL-ARTTADRQTACNCLK 76 HSP 2 Score: 42.3578 bits (98), Expect = 1.203e-12 Identity = 18/31 (58.06%), Postives = 21/31 (67.74%), Query Frame = 1 Query: 163 KRAYGTIRGIKPNVAAGLPSXCGVRIPYXIS 255 K G+I G+ PN AAGLP CGV +PY IS Sbjct: 76 KNLAGSISGVNPNNAAGLPGKCGVNVPYKIS 106
BLAST of CF417087 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUDU (Non-specific lipid-transfer protein 1 OS=Prunus dulcis PE=3 SV=1) HSP 1 Score: 52.7582 bits (125), Expect = 1.563e-12 Identity = 23/50 (46.00%), Postives = 35/50 (70.00%), Query Frame = 3 Query: 15 QVTASLXPCIPFLKTGGRFSPPPCCXGVQSLNGADXNXPPXRRAACNCLE 164 QV+++L PCIP+++ GG PP CC G++++N P R+AACNCL+ Sbjct: 31 QVSSNLAPCIPYVRGGGAV-PPACCNGIRNVNNL-ARTTPDRQAACNCLK 78 HSP 2 Score: 40.4318 bits (93), Expect = 1.563e-12 Identity = 17/32 (53.12%), Postives = 21/32 (65.62%), Query Frame = 1 Query: 163 KRAYGTIRGIKPNVAAGLPSXCGVRIPYXISP 258 K+ ++ G+ PN AA LP CGV IPY ISP Sbjct: 78 KQLSASVPGVNPNNAAALPGKCGVNIPYQISP 109
BLAST of CF417087 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUAR (Non-specific lipid-transfer protein 1 OS=Prunus armeniaca PE=1 SV=2) HSP 1 Score: 50.447 bits (119), Expect = 5.786e-12 Identity = 23/50 (46.00%), Postives = 33/50 (66.00%), Query Frame = 3 Query: 15 QVTASLXPCIPFLKTGGRFSPPPCCXGVQSLNGADXNXPPXRRAACNCLE 164 QV++SL PCI +++ GG PP CC G++++N P RR ACNCL+ Sbjct: 5 QVSSSLAPCIGYVRGGGAV-PPACCNGIRNVNNL-ARTTPDRRTACNCLK 52 HSP 2 Score: 40.817 bits (94), Expect = 5.786e-12 Identity = 18/31 (58.06%), Postives = 21/31 (67.74%), Query Frame = 1 Query: 163 KRAYGTIRGIKPNVAAGLPSXCGVRIPYXIS 255 K+ G+I G+ PN AA LP CGV IPY IS Sbjct: 52 KQLSGSISGVNPNNAAALPGKCGVNIPYKIS 82
BLAST of CF417087 vs. ExPASy Swiss-Prot
Match: NLTP1_PRUPE (Non-specific lipid-transfer protein 1 OS=Prunus persica PE=1 SV=1) HSP 1 Score: 52.7582 bits (125), Expect = 9.764e-12 Identity = 23/50 (46.00%), Postives = 35/50 (70.00%), Query Frame = 3 Query: 15 QVTASLXPCIPFLKTGGRFSPPPCCXGVQSLNGADXNXPPXRRAACNCLE 164 QV+++L PCIP+++ GG PP CC G++++N P R+AACNCL+ Sbjct: 5 QVSSALAPCIPYVRGGGAV-PPACCNGIRNVNNL-ARTTPDRQAACNCLK 52 HSP 2 Score: 37.7354 bits (86), Expect = 9.764e-12 Identity = 16/31 (51.61%), Postives = 20/31 (64.52%), Query Frame = 1 Query: 163 KRAYGTIRGIKPNVAAGLPSXCGVRIPYXIS 255 K+ ++ G+ PN AA LP CGV IPY IS Sbjct: 52 KQLSASVPGVNPNNAAALPGKCGVHIPYKIS 82
BLAST of CF417087 vs. ExPASy Swiss-Prot
Match: NLTP_PYRCO (Non-specific lipid-transfer protein OS=Pyrus communis PE=1 SV=1) HSP 1 Score: 54.6842 bits (130), Expect = 1.268e-11 Identity = 24/51 (47.06%), Postives = 37/51 (72.55%), Query Frame = 3 Query: 12 AQVTASLXPCIPFLKTGGRFSPPPCCXGVQSLNGADXNXPPXRRAACNCLE 164 +QV+A+L PCI ++++GG PP CC G++++NG P R+AACNCL+ Sbjct: 28 SQVSANLAPCINYVRSGGAV-PPACCNGIKTINGL-AKTTPDRQAACNCLK 76 HSP 2 Score: 35.4242 bits (80), Expect = 1.268e-11 Identity = 14/31 (45.16%), Postives = 18/31 (58.06%), Query Frame = 1 Query: 163 KRAYGTIRGIKPNVAAGLPSXCGVRIPYXIS 255 K G++ G+ P A LP CGV +PY IS Sbjct: 76 KNLAGSVSGVNPGNAESLPGKCGVNVPYKIS 106
BLAST of CF417087 vs. ExPASy Swiss-Prot
Match: NLTP2_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 51.2174 bits (121), Expect = 2.740e-11 Identity = 25/55 (45.45%), Postives = 36/55 (65.45%), Query Frame = 3 Query: 9 AAQVTASLXPCIPFLK-TGGRFSPPPCCXGVQSLNGADXNXPPXRRAACNCLETS 170 + QVT SL PCI +L+ +G PP CC G++SLN A P R+AAC C++++ Sbjct: 30 SGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSA-AQTTPVRQAACRCIKSA 83 HSP 2 Score: 37.7354 bits (86), Expect = 2.740e-11 Identity = 18/32 (56.25%), Postives = 20/32 (62.50%), Query Frame = 1 Query: 163 KRAYGTIRGIKPNVAAGLPSXCGVRIPYXISP 258 K A I GI +A+GLP CGV IPY ISP Sbjct: 81 KSAAAGITGINFGLASGLPGKCGVNIPYKISP 112
BLAST of CF417087 vs. ExPASy Swiss-Prot
Match: NLTP4_ARATH (Non-specific lipid-transfer protein 4 OS=Arabidopsis thaliana GN=LTP4 PE=2 SV=1) HSP 1 Score: 51.9878 bits (123), Expect = 2.780e-11 Identity = 26/57 (45.61%), Postives = 35/57 (61.40%), Query Frame = 3 Query: 18 VTASLXPCIPFLKTGGRFSPPPCCXGVQSLNGADXNXPPXRRAACNCLETSLRN-NP 185 V +SL PC+ +L GG PPPCC GV+ LNG P R+ AC CL+++ + NP Sbjct: 30 VASSLSPCLGYLSKGG-VVPPPCCAGVKKLNGM-AQTTPDRQQACRCLQSAAKGVNP 84 HSP 2 Score: 36.965 bits (84), Expect = 2.780e-11 Identity = 14/24 (58.33%), Postives = 19/24 (79.17%), Query Frame = 1 Query: 184 RGIKPNVAAGLPSXCGVRIPYXIS 255 +G+ P++A+GLP CGV IPY IS Sbjct: 80 KGVNPSLASGLPGKCGVSIPYPIS 103
BLAST of CF417087 vs. ExPASy Swiss-Prot
Match: NLTP1_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 51.2174 bits (121), Expect = 2.780e-11 Identity = 25/55 (45.45%), Postives = 36/55 (65.45%), Query Frame = 3 Query: 9 AAQVTASLXPCIPFLK-TGGRFSPPPCCXGVQSLNGADXNXPPXRRAACNCLETS 170 + QVT SL PCI +L+ +G PP CC G++SLN A P R+AAC C++++ Sbjct: 26 SGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSA-AQTTPVRQAACRCIKSA 79 HSP 2 Score: 37.7354 bits (86), Expect = 2.780e-11 Identity = 18/32 (56.25%), Postives = 20/32 (62.50%), Query Frame = 1 Query: 163 KRAYGTIRGIKPNVAAGLPSXCGVRIPYXISP 258 K A I GI +A+GLP CGV IPY ISP Sbjct: 77 KSAAAGITGINFGLASGLPGKCGVNIPYKISP 108 The following BLAST results are available for this feature:
BLAST of CF417087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417087 ID=CF417087; Name=CF417087; organism=Citrus sinensis; type=EST; length=485bpback to top |