CF417127

Overview
NameCF417127
Unique NameCF417127
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length542
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1549 contig Csv1_Contig1549:125..666. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417127 vs. ExPASy Swiss-Prot
Match: CB5D2_CAEBR (Cytochrome b5 domain-containing protein 2 homolog OS=Caenorhabditis briggsae GN=tag-131 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.393e-13
Identity = 42/129 (32.56%), Postives = 63/129 (48.84%), Query Frame = 1
Query:  169 EQMEPLPPPVQLGE-----ITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKXGSIKSTVPVTDGASSGE 540
            E ++ + P V +        T E+L  +DGS   KP  +AI  ++YDV   + +YGPG  Y  FAG+DA+RA     F E  L     GL   EL +++DW   +  +Y   G +      +DG  + E
Sbjct:   82 EHLQAINPEVDVAAGGKHVFTPEQLHFFDGSRDSKPCYLAILGRVYDVDGKKEYYGPGKSYHHFAGRDATRAFTTGDFTENGLVASTHGLSHDELLSIRDWVSFYDKEYPLVGVVADLYYDSDGQPTAE 210          
BLAST of CF417127 vs. ExPASy Swiss-Prot
Match: DAP1_YEAST (Damage response protein 1 OS=Saccharomyces cerevisiae GN=DAP1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.187e-12
Identity = 41/108 (37.96%), Postives = 61/108 (56.48%), Query Frame = 1
Query:  193 PVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFE---EKDLTGDISGLGPF---ELEALQDWEYKFMSKYVKXGSI 498
            PV  G      L +++G D +K + +AI+ ++YD ++ R FYGP GPY  FAG DASR LA  SF+    KD    I  L      +++AL +W+  F +KY   G++
Sbjct:   38 PVVAGNFFPRTLSKFNGHDDEK-IFIAIRGKVYDCTRGRQFYGPSGPYTNFAGHDASRGLALNSFDLDVIKDWDQPIDPLDDLTKEQIDALDEWQEHFENKYPCIGTL 144          
BLAST of CF417127 vs. ExPASy Swiss-Prot
Match: CB5D2_MOUSE (Cytochrome b5 domain-containing protein 2 OS=Mus musculus GN=Cyb5d2 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.455e-12
Identity = 39/107 (36.45%), Postives = 53/107 (49.53%), Query Frame = 1
Query:  220 EELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKXGSIKSTVPVTDGASSGE 540
            EEL +Y G      L +A+  ++YDVS  R  Y PG  Y+ FAG+DASRA     + E  L  DI+GL   E+  L +W   +   YV  G +       DG  + E
Sbjct:   41 EELARYRGGPGDPGLYLALLGRVYDVSSGRRHYEPGAHYSGFAGRDASRAFVTGDYSEAGLVDDINGLSSSEILTLHNWLSFYEKNYVFVGRLVGRFYRKDGLPTSE 147          
BLAST of CF417127 vs. ExPASy Swiss-Prot
Match: CB5D2_CAEEL (Cytochrome b5 domain-containing protein 2 homolog OS=Caenorhabditis elegans GN=tag-131 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.512e-12
Identity = 39/129 (30.23%), Postives = 65/129 (50.39%), Query Frame = 1
Query:  169 EQMEPLPPPVQLGE-----ITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKXGSIKSTVPVTDGASSGE 540
            E ++ + P V +        T E+L  +DG+   KP+ +AI  ++Y+V   + +YGPG  Y  FAG+DA+RA     F+E  L     GL   EL +++DW   +  +Y   G +      ++G  + E
Sbjct:   82 EHIQAINPEVDVAAGGKHVFTPEQLHFFDGTRDSKPIYLAILGRVYNVDGKKEYYGPGKSYHHFAGRDATRAFTTGDFQESGLIATTHGLSHDELLSIRDWVSFYDKEYPLVGVVADLYYDSEGQPTPE 210          
BLAST of CF417127 vs. ExPASy Swiss-Prot
Match: CB5D2_RAT (Cytochrome b5 domain-containing protein 2 OS=Rattus norvegicus GN=Cyb5d2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.893e-12
Identity = 38/107 (35.51%), Postives = 53/107 (49.53%), Query Frame = 1
Query:  220 EELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKXGSIKSTVPVTDGASSGE 540
            EEL +Y G      L +A+  ++YDVS  R  Y PG  Y+ FAG+DASRA     + E  L  D++GL   E+  L +W   +   YV  G +       DG  + E
Sbjct:   41 EELARYRGGPGDPGLYLALLGRVYDVSSGRKHYEPGAHYSGFAGRDASRAFVTGDYSEAGLVDDVNGLSSSEILTLHNWLSFYEKNYVFVGRLIGRFYGKDGLPTSE 147          
BLAST of CF417127 vs. ExPASy Swiss-Prot
Match: CB5D2_HUMAN (Cytochrome b5 domain-containing protein 2 OS=Homo sapiens GN=CYB5D2 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.516e-11
Identity = 37/102 (36.27%), Postives = 49/102 (48.04%), Query Frame = 1
Query:  220 EELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKXGSIKSTVPVTDG 525
            EEL +Y G      L +A+  ++YDVS  R  Y PG  Y+ FAG+DASRA       E  L  D+S L   E+  L +W   +   YV  G +       DG
Sbjct:   41 EELSRYRGGPGDPGLYLALLGRVYDVSSGRRHYEPGSHYSGFAGRDASRAFVTGDCSEAGLVDDVSDLSAAEMLTLHNWLSFYEKNYVCVGRVTGRFYGEDG 142          
The following BLAST results are available for this feature:
BLAST of CF417127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
CB5D2_CAEBR2.393e-1332.56Cytochrome b5 domain-containing protein 2 homolog ... [more]
DAP1_YEAST1.187e-1237.96Damage response protein 1 OS=Saccharomyces cerevis... [more]
CB5D2_MOUSE3.455e-1236.45Cytochrome b5 domain-containing protein 2 OS=Mus m... [more]
CB5D2_CAEEL4.512e-1230.23Cytochrome b5 domain-containing protein 2 homolog ... [more]
CB5D2_RAT5.893e-1235.51Cytochrome b5 domain-containing protein 2 OS=Rattu... [more]
CB5D2_HUMAN6.516e-1136.27Cytochrome b5 domain-containing protein 2 OS=Homo ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-057 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-001_F7 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417127 ID=CF417127; Name=CF417127; organism=Citrus sinensis; type=EST; length=542bp
GCTCTGCAACTATGGGAGACTCTAAAGGAGGCGATAACAGCGTACACGGG
GCTCTCCCCGGCGGCGTTTTTTACAGTTGTTGCGTTGCTGTGGGCCATAT
ACTATGTTCTGTCGGGAATGTTTGGTTCGTCCGATAATCATCATCAGCAG
AGATCGAGGGAGTACGAGGAACAGATGGAGCCTCTGCCACCGCCTGTTCA
GCTAGGCGAGATTACCGAGGAGGAGCTCAAACAGTACGATGGCTCCGATT
CCAAAAAGCCCCTTCTCATGGCCATCAAGAGCCAGATCTACGATGTCTCT
CAGAGCAGGATGTTTTATGGACCTGGTGGGCCATATGCGTTGTTTGCTGG
AAAGGATGCTAGCAGGGCCCTTGCCAAGATGTCTTTTGAGGAAAAAGATT
TAACTGGTGATATCTCTGGTCTTGGTCCATTTGAGTTGGAGGCATTGCAG
GACTGGGAGTATAAGTTCATGAGCAAGTATGTTAAGGNTGGATCTATCAA
GTCGACAGTTCCAGTAACAGATGGAGCCTCCTCTGGTGAATC
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