CF417127
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417127 vs. ExPASy Swiss-Prot
Match: MSBP2_ARATH (Membrane steroid-binding protein 2 OS=Arabidopsis thaliana GN=MSBP2 PE=1 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 2.275e-72 Identity = 136/165 (82.42%), Postives = 148/165 (89.70%), Query Frame = 1 Query: 7 QLWETLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMFGSSDNHHQQRSREYEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKXGSIK 501 Q+WETLKE ITAYTGLSPAAFFTV+AL +A+Y V+SG F S + H + RS E + Q EPLPPPVQLGEITEEELK YDGSDSKKPLLMAIK QIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFE++DLTGDISGLG FELEALQDWEYKFMSKYVK G+I+ Sbjct: 4 QIWETLKETITAYTGLSPAAFFTVLALAFAVYQVVSGFFVSPEVH-RPRSLEVQPQSEPLPPPVQLGEITEEELKLYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEDQDLTGDISGLGAFELEALQDWEYKFMSKYVKVGTIQ 167
BLAST of CF417127 vs. ExPASy Swiss-Prot
Match: MSBP1_ARATH (Membrane steroid-binding protein 1 OS=Arabidopsis thaliana GN=MSBP1 PE=1 SV=2) HSP 1 Score: 257.299 bits (656), Expect = 3.399e-68 Identity = 130/183 (71.04%), Postives = 147/183 (80.33%), Query Frame = 1 Query: 1 ALQLWETLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMFGS---SDNHHQQRSREYEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKXGSIKSTVPVTDGASSGE 540 AL+LW+TLKEAI AYTGLSP FFT +AL +AIY V+SG F S N HQ+ +E+ P+P PVQ+GEITEEELKQYDGSD +KPLLMAIK QIYDV+QSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLT D+SGLGPFEL+ALQDWEYKFMSKY K G++K + AS E Sbjct: 2 ALELWQTLKEAIHAYTGLSPVVFFTALALAFAIYQVISGWFASPFDDVNRHQRARSLAQEEEPPIPQPVQVGEITEEELKQYDGSDPQKPLLMAIKHQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTWDVSGLGPFELDALQDWEYKFMSKYAKVGTVKVAGSEPETASVSE 184
BLAST of CF417127 vs. ExPASy Swiss-Prot
Match: SBP3_ARATH (Probable steroid-binding protein 3 OS=Arabidopsis thaliana GN=MP3 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 7.420e-23 Identity = 49/99 (49.49%), Postives = 68/99 (68.69%), Query Frame = 1 Query: 208 EITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYKFMSKYVKXGSIKS 504 E T E+L QY+G+D KP+ +AIK +++DV+ + FYG GG Y++FAGKDASRAL KMS E+D++ + GL E+ L DWE KF +KY G + S Sbjct: 2 EFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMSKNEEDVSPSLEGLTEKEINTLNDWETKFEAKYPVVGRVVS 100
BLAST of CF417127 vs. ExPASy Swiss-Prot
Match: NENF_RAT (Neudesin OS=Rattus norvegicus GN=Nenf PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 4.977e-19 Identity = 51/114 (44.74%), Postives = 70/114 (61.40%), Query Frame = 1 Query: 190 PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQD-WEYKFMSKYVKXGSIKSTVPVTDGA 528 PPV+L TEEEL +Y G + +P+ +A+K ++DV+ + FYG G PY AGKD+SR +AKMS + DLT DISGL ELEAL D + + +KY G + DG+ Sbjct: 41 PPVRL--FTEEELARYSGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRGVAKMSLDPADLTHDISGLTAKELEALDDIFSKVYKAKYPIVGYTARRILNEDGS 152
BLAST of CF417127 vs. ExPASy Swiss-Prot
Match: NENF_MOUSE (Neudesin OS=Mus musculus GN=Nenf PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.503e-18 Identity = 49/114 (42.98%), Postives = 69/114 (60.53%), Query Frame = 1 Query: 190 PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQD-WEYKFMSKYVKXGSIKSTVPVTDGA 528 PPV+L TEEEL +Y G + +P+ +A+K ++DV+ + FYG G PY AGKD+SR +AKMS + DLT D +GL ELEAL D + + +KY G + DG+ Sbjct: 41 PPVRL--FTEEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRGVAKMSLDPADLTHDTTGLTAKELEALDDVFSKVYKAKYPIVGYTARRILNEDGS 152
BLAST of CF417127 vs. ExPASy Swiss-Prot
Match: PGRC1_RAT (Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus GN=Pgrmc1 PE=1 SV=3) HSP 1 Score: 87.8113 bits (216), Expect = 3.567e-17 Identity = 47/111 (42.34%), Postives = 68/111 (61.26%), Query Frame = 1 Query: 178 EPLP-PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEE---KDLTGDISGLGPFELEALQDWEYKFMSKYVKXGSI 498 EP P P ++ + T EL++YDG + +LMAI +++DV++ R FYGP GPY +FAG+DASR LA ++ KD D+S L P + E L DW+ +F KY G + Sbjct: 61 EPPPLPRLKPRDFTPAELRRYDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLNDWDSQFTFKYHHVGKL 170
BLAST of CF417127 vs. ExPASy Swiss-Prot
Match: PGRC1_PIG (Membrane-associated progesterone receptor component 1 OS=Sus scrofa GN=PGRMC1 PE=1 SV=3) HSP 1 Score: 87.4261 bits (215), Expect = 4.659e-17 Identity = 49/151 (32.45%), Postives = 81/151 (53.64%), Query Frame = 1 Query: 55 SPAAFFTVVALLWAIYYVLSGMFGSSDNHHQQRSREYEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEE---KDLTGDISGLGPFELEALQDWEYKFMSKYVKXGSI 498 SP + ++ +Y ++ G Q + + ++ P P ++ + T EL+++DG + +LMAI +++DV++ R FYGP GPY +FAG+DASR LA ++ KD D+S L P + E L DW+ +F KY G + Sbjct: 28 SPLNLLLLGLCIFLLYKIVRG--------DQPAASDSDDDEPPPLPRLKRRDFTPAELRRFDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLNDWDSQFTFKYHHVGKL 169
BLAST of CF417127 vs. ExPASy Swiss-Prot
Match: PGRC1_BOVIN (Membrane-associated progesterone receptor component 1 OS=Bos taurus GN=PGRMC1 PE=2 SV=3) HSP 1 Score: 87.4261 bits (215), Expect = 4.659e-17 Identity = 49/151 (32.45%), Postives = 81/151 (53.64%), Query Frame = 1 Query: 55 SPAAFFTVVALLWAIYYVLSGMFGSSDNHHQQRSREYEEQMEPLPPPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEE---KDLTGDISGLGPFELEALQDWEYKFMSKYVKXGSI 498 SP + ++ +Y ++ G Q + + ++ P P ++ + T EL+++DG + +LMAI +++DV++ R FYGP GPY +FAG+DASR LA ++ KD D+S L P + E L DW+ +F KY G + Sbjct: 28 SPLNLLLLGLCIFLLYKIVRG--------DQPAASDSDDDEPPPLPRLKRRDFTPAELRRFDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLSDWDSQFTFKYHHVGKL 169
BLAST of CF417127 vs. ExPASy Swiss-Prot
Match: NENF_BOVIN (Neudesin OS=Bos taurus GN=NENF PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.659e-17 Identity = 47/114 (41.23%), Postives = 68/114 (59.65%), Query Frame = 1 Query: 190 PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQD-WEYKFMSKYVKXGSIKSTVPVTDGA 528 PPV+L TEEEL +Y G + +P+ MA+K ++DV+ + FYG G PY GKD++R +AKMS + DLT D +GL ELE+L D + + +KY G + DG+ Sbjct: 39 PPVRL--FTEEELARYGGEEEDQPIYMAVKGVVFDVTSGKEFYGRGAPYNALTGKDSTRGVAKMSLDPADLTHDTTGLTAEELESLDDVFTRVYKAKYPIVGYTARRILNEDGS 150
BLAST of CF417127 vs. ExPASy Swiss-Prot
Match: PGRC1_MOUSE (Membrane-associated progesterone receptor component 1 OS=Mus musculus GN=Pgrmc1 PE=1 SV=4) HSP 1 Score: 86.6557 bits (213), Expect = 7.947e-17 Identity = 46/111 (41.44%), Postives = 68/111 (61.26%), Query Frame = 1 Query: 178 EPLP-PPVQLGEITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEE---KDLTGDISGLGPFELEALQDWEYKFMSKYVKXGSI 498 EP P P ++ + T EL+++DG + +LMAI +++DV++ R FYGP GPY +FAG+DASR LA ++ KD D+S L P + E L DW+ +F KY G + Sbjct: 61 EPPPLPRLKRRDFTPAELRRFDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLSDWDSQFTFKYHHVGKL 170 The following BLAST results are available for this feature:
BLAST of CF417127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417127 ID=CF417127; Name=CF417127; organism=Citrus sinensis; type=EST; length=542bpback to top |