CF417217
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417217 vs. ExPASy Swiss-Prot
Match: RL5_CUCSA (60S ribosomal protein L5 OS=Cucumis sativus GN=RPL5 PE=2 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.213e-62 Identity = 121/175 (69.14%), Postives = 131/175 (74.86%), Query Frame = 1 Query: 1 LEMDAEYEGHVEATGEDYSVEPTXNXRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFXKDSKQLDAEXHRXYIYCGHVAAYMRTLMEXXPXXYXSHFCEYIXRGIEADNLEXLYKKVHAAIRAXPNQXXXXXXPPAEHKRYNLKKLTYEERKARLVERLKAL 525 LEMDAEYEG+VEATGEDYSVEP RPFRALLDVGL++TTTGNRVF IPHS+KRFAG+ K+ +QLD E HR YI+ GHVAAYMRTLME P Y SHF EYI +GIEAD LE LYKKVHAAIRA P P HKRYNLKKLTY+ERKARLVERL AL Sbjct: 113 LEMDAEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGYAKNGQQLDVEVHRKYIFGGHVAAYMRTLMEDEPEKYQSHFSEYIKKGIEADELEGLYKKVHAAIRANPIAKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNAL 287
BLAST of CF417217 vs. ExPASy Swiss-Prot
Match: RL52_ARATH (60S ribosomal protein L5-2 OS=Arabidopsis thaliana GN=RPL5B PE=2 SV=3) HSP 1 Score: 228.794 bits (582), Expect = 1.639e-59 Identity = 112/175 (64.00%), Postives = 132/175 (75.43%), Query Frame = 1 Query: 1 LEMDAEYEGHVEATGEDYSVEPTXNXRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFXKDSKQLDAEXHRXYIYCGHVAAYMRTLMEXXPXXYXSHFCEYIXRGIEADNLEXLYKKVHAAIRAXPNQXXXXXXPPAEHKRYNLKKLTYEERKARLVERLKAL 525 LEMD EYEG+VEATGED+SVEPT + RPFRALLDVGL++TTTGNRVF IPHS+KRFAGF K++KQLDAE HR YIY GHV+ YM+ L E P +HF YI +G+EA+++E +YKKVHAAIRA PN P EHKRYNLKKLTYEERK +L+ER+KAL Sbjct: 113 LEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEEMYKKVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKAL 287
BLAST of CF417217 vs. ExPASy Swiss-Prot
Match: RL51_ARATH (60S ribosomal protein L5-1 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=2) HSP 1 Score: 228.024 bits (580), Expect = 2.796e-59 Identity = 112/175 (64.00%), Postives = 132/175 (75.43%), Query Frame = 1 Query: 1 LEMDAEYEGHVEATGEDYSVEPTXNXRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFXKDSKQLDAEXHRXYIYCGHVAAYMRTLMEXXPXXYXSHFCEYIXRGIEADNLEXLYKKVHAAIRAXPNQXXXXXXPPAEHKRYNLKKLTYEERKARLVERLKAL 525 LEMD EYEG+VEATGED+SVEPT + RPFRALLDVGL++TTTGNRVF IPHS+KRFAGF K++KQLDAE HR YIY GHV+ YM+ L E P +HF YI +G+EA+++E LYKKVHAAIRA PN P +HKRYNLKKLTYEERK +L+ER+KAL Sbjct: 113 LEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEELYKKVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKAL 287
BLAST of CF417217 vs. ExPASy Swiss-Prot
Match: RL52_ORYSJ (60S ribosomal protein L5-2 OS=Oryza sativa subsp. japonica GN=RPL5B PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 3.092e-58 Identity = 110/173 (63.58%), Postives = 126/173 (72.83%), Query Frame = 1 Query: 7 MDAEYEGHVEATGEDYSVEPTXNXRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFXKDSKQLDAEXHRXYIYCGHVAAYMRTLMEXXPXXYXSHFCEYIXRGIEADNLEXLYKKVHAAIRAXPNQXXXXXXPPAEHKRYNLKKLTYEERKARLVERLKAL 525 +D EYEG+VEATGEDY VEP RPFRALLDVGL++TTTGNRVF IPHS+KRFAGF KD KQLD++ HR YIY GHVA YMR++ E P + +HF EY+ +GI+AD +E LYKKVHAAIRA P PA HKRYNLKKLTYE+RKA LVERL AL Sbjct: 116 LDQEYEGNVEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMESLYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNAL 288
BLAST of CF417217 vs. ExPASy Swiss-Prot
Match: RL51_ORYSJ (60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica GN=RPL5A PE=2 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 4.038e-58 Identity = 109/173 (63.01%), Postives = 126/173 (72.83%), Query Frame = 1 Query: 7 MDAEYEGHVEATGEDYSVEPTXNXRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFXKDSKQLDAEXHRXYIYCGHVAAYMRTLMEXXPXXYXSHFCEYIXRGIEADNLEXLYKKVHAAIRAXPNQXXXXXXPPAEHKRYNLKKLTYEERKARLVERLKAL 525 +D EYEG++EATGEDY VEP RPFRALLDVGL++TTTGNRVF IPHS+KRFAGF KD KQLD++ HR YIY GHVA YMR++ E P + +HF EY+ +GI+AD +E LYKKVHAAIRA P PA HKRYNLKKLTYE+RKA LVERL AL Sbjct: 116 LDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNAL 288
BLAST of CF417217 vs. ExPASy Swiss-Prot
Match: RL51_ORYSI (60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica GN=RPL5A PE=2 SV=2) HSP 1 Score: 224.172 bits (570), Expect = 4.038e-58 Identity = 109/173 (63.01%), Postives = 126/173 (72.83%), Query Frame = 1 Query: 7 MDAEYEGHVEATGEDYSVEPTXNXRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFXKDSKQLDAEXHRXYIYCGHVAAYMRTLMEXXPXXYXSHFCEYIXRGIEADNLEXLYKKVHAAIRAXPNQXXXXXXPPAEHKRYNLKKLTYEERKARLVERLKAL 525 +D EYEG++EATGEDY VEP RPFRALLDVGL++TTTGNRVF IPHS+KRFAGF KD KQLD++ HR YIY GHVA YMR++ E P + +HF EY+ +GI+AD +E LYKKVHAAIRA P PA HKRYNLKKLTYE+RKA LVERL AL Sbjct: 116 LDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGFKKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMEALYKKVHAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNAL 288
BLAST of CF417217 vs. ExPASy Swiss-Prot
Match: RL5_CAEEL (60S ribosomal protein L5 OS=Caenorhabditis elegans GN=rpl-5 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.113e-34 Identity = 75/173 (43.35%), Postives = 106/173 (61.27%), Query Frame = 1 Query: 7 MDAEYEGHVEATGEDYSVEPTXNXRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFXKDSKQLDAEXHRXYIYCGHVAAYMRTLMEXXPXXYXSHFCEYIXRGIEADNLEXLYKKVHAAIRAXPNQXXXXXXPPAEHKRYNLKKLTYEERKARLVERLKAL 525 +D+ Y+GH E TGEDY+VE + PF+A+LD+GL +TTTG+++F +PHSE RF GF ++SK+ +AE HR I HVA YM L E Y F +++ G+ ADNL Y+KVH+AIRA + P+ KR+ K+LTY+ERK R+ ++ KAL Sbjct: 115 LDSTYKGHEELTGEDYNVEEEGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRFFGFDQESKEYNAEAHRDRILGKHVADYMTYLKEEDEDRYKRQFSKFLAAGLNADNLVATYQKVHSAIRADASPAAKKAAKPS--KRHTAKRLTYDERKQRVADK-KAL 284
BLAST of CF417217 vs. ExPASy Swiss-Prot
Match: RL5_CAEBR (60S ribosomal protein L5 OS=Caenorhabditis briggsae GN=rpl-5 PE=3 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 3.113e-34 Identity = 75/173 (43.35%), Postives = 104/173 (60.12%), Query Frame = 1 Query: 7 MDAEYEGHVEATGEDYSVEPTXNXRPFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFXKDSKQLDAEXHRXYIYCGHVAAYMRTLMEXXPXXYXSHFCEYIXRGIEADNLEXLYKKVHAAIRAXPNQXXXXXXPPAEHKRYNLKKLTYEERKARLVERLKAL 525 +D+ Y+GH E TGEDY+VE + PF+A+LD+GL +TTTG+++F +PHSE RF GF ++SK +AE HR I HVA YM L E Y F +++ G+ ADNL Y+K HA IRA P+ P+ KR+ K+LTY+ERK R+ ++ KAL Sbjct: 115 LDSTYKGHEELTGEDYNVEEEGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRFFGFDQESKDYNAEAHRDRILGKHVADYMSLLKEEDEDRYKRQFSKFLSNGMNADNLVATYQKAHANIRADPSPSAKKAAKPS--KRHTAKRLTYDERKQRVADK-KAL 284
BLAST of CF417217 vs. ExPASy Swiss-Prot
Match: RL5_SOLME (60S ribosomal protein L5 (Fragment) OS=Solanum melongena GN=RPL5 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.231e-32 Identity = 68/104 (65.38%), Postives = 74/104 (71.15%), Query Frame = 1 Query: 214 KDSKQLDAEXHRXYIYCGHVAAYMRTLMEXXPXXYXSHFCEYIXRGIEADNLEXLYKKVHAAIRAXPNQXXXXXXPPAEHKRYNLKKLTYEERKARLVERLKAL 525 KDSKQLDAE HR YIY GHVAAYM LME P Y SHF YI + DN+E +YKKVHAAIR P+ PP HKRYNLKKLTYEERKA+L+ERL AL Sbjct: 3 KDSKQLDAEVHRKYIYGGHVAAYMNILMEDEPEKYQSHFSSYIKADLAPDNIEEMYKKVHAAIRPDPSPKKSQKQPPKTHKRYNLKKLTYEERKAKLIERLNAL 106
BLAST of CF417217 vs. ExPASy Swiss-Prot
Match: RL5_LYSTE (60S ribosomal protein L5 OS=Lysiphlebus testaceipes GN=RpL5 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.107e-31 Identity = 73/175 (41.71%), Postives = 100/175 (57.14%), Query Frame = 1 Query: 1 LEMDAEYEGHVEATGEDYSVEPTXNXR-PFRALLDVGLVKTTTGNRVFXXXXXXXXXXXXIPHSEKRFAGFXKDSKQLDAEXHRXYIYCGHVAAYMRTLMEXXPXXYXSHFCEYIXRGIEADNLEXLYKKVHAAIRAXPNQXXXXXXPPAEHKRYNLKKLTYEERKARLVERLKA 522 L++D Y G E G++Y+VE + FR LD GL++TTTG R+F IPHS KRF G+ +SK +A+ HR +I+ H+A YM+TL E P + F +YI GI AD +E +YKK H AIRA P++ KR+N KLT ERK R V+++KA Sbjct: 113 LKLDTLYTGTTEVDGDEYNVEEHDDGPGAFRCYLDTGLMRTTTGARIFGAMKGAVDGGLNIPHSTKRFPGYDNESKSFNADVHRQHIFAHHIANYMKTLEENEPENFQRQFSQYIKNGITADGIEEMYKKAHEAIRADPDRAEIVKTKEPVKKRWNRAKLTLSERKDR-VKQIKA 286 The following BLAST results are available for this feature:
BLAST of CF417217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417217 ID=CF417217; Name=CF417217; organism=Citrus sinensis; type=EST; length=602bpback to top |