CF417249
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417249 vs. ExPASy Swiss-Prot
Match: MDH_ALTMD (Malate dehydrogenase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=mdh PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 2.904e-48 Identity = 101/172 (58.72%), Postives = 118/172 (68.60%), Query Frame = 1 Query: 115 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFRGGSFGT*SLGDVDV 624 KVA+LGAAGGIGQ L++L+K P S L LYDV PGV D+SH+ T V G G+ L +ALTG D+V+IPAG+PRKPGM R DLFNINAGIV+ L EG+A CPNA V +I+NPVN+TV IAAE K G YD KL GVT LDV+RA TF L DVDV Sbjct: 2 KVAVLGAAGGIGQALSLLLKTQLPAGSDLALYDVAPVVPGVAVDLSHIPTAVKVTGH-GKDDLADALTGADVVLIPAGMPRKPGMDRSDLFNINAGIVKNLIEGVADNCPNACVGIITNPVNTTVAIAAETLKAKGVYDKNKLFGVTTLDVIRAETFVA------ELKDVDV 166 HSP 2 Score: 33.8834 bits (76), Expect = 2.904e-48 Identity = 14/18 (77.78%), Postives = 17/18 (94.44%), Query Frame = 2 Query: 629 VVGGHAGVTILPLLSQVK 682 V+GGH+G TILPLLSQV+ Sbjct: 173 VIGGHSGTTILPLLSQVE 190
BLAST of CF417249 vs. ExPASy Swiss-Prot
Match: MDH_SALDC (Malate dehydrogenase OS=Salmonella dublin (strain CT_02021853) GN=mdh PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 2.904e-48 Identity = 93/157 (59.24%), Postives = 114/157 (72.61%), Query Frame = 1 Query: 115 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTF 579 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH+ T ++GF G+ AL G D+V+I AGV R+PGM R DLFN+NAGIV+ L + IAK CP A V +I+NPVN+TV IAAEV KKAG YD KL GVT LD++R+NTF Sbjct: 2 KVAVLGAAGGIGQALALLLKNQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP-ALEGADVVLISAGVARRPGMDRSDLFNVNAGIVKNLVQQIAKTCPKACVGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTF 157 HSP 2 Score: 37.3502 bits (85), Expect = 2.904e-48 Identity = 18/24 (75.00%), Postives = 21/24 (87.50%), Query Frame = 2 Query: 629 VVGGHAGVTILPLLSQVKPPCSFT 700 V+GGH+GVTILPLLSQ+ P SFT Sbjct: 173 VIGGHSGVTILPLLSQI-PGVSFT 195
BLAST of CF417249 vs. ExPASy Swiss-Prot
Match: MDH_EDWI9 (Malate dehydrogenase OS=Edwardsiella ictaluri (strain 93-146) GN=mdh PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.904e-48 Identity = 93/159 (58.49%), Postives = 114/159 (71.70%), Query Frame = 1 Query: 115 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFRG 585 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH+ T V GF G+ AL G D+V+I AGV RKPGM R DLFN+NAGI+R L +A+ PNA + +I+NPVN+ VPIAAEV KKAG Y+P KL GVT LD++R+NTF G Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKVCGFGGE-DASPALVGADIVLISAGVARKPGMDRSDLFNVNAGIIRNLIGQVARTSPNACIGIITNPVNTMVPIAAEVLKKAGVYNPNKLFGVTTLDIIRSNTFVG 159 HSP 2 Score: 37.7354 bits (86), Expect = 2.904e-48 Identity = 20/33 (60.61%), Postives = 24/33 (72.73%), Query Frame = 2 Query: 581 VAEVLGLDP*GMLMFLVVGGHAGVTILPLLSQV 679 V E+ LDP L V+GGH+GVTILPLLSQ+ Sbjct: 158 VGELKHLDP-ATLDIPVIGGHSGVTILPLLSQI 189
BLAST of CF417249 vs. ExPASy Swiss-Prot
Match: MDH_ENTS8 (Malate dehydrogenase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=mdh PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.904e-48 Identity = 91/157 (57.96%), Postives = 114/157 (72.61%), Query Frame = 1 Query: 115 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTF 579 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH+ T ++GF G+ + AL G D+V+I AGV RKPGM R DLFN+NAGIV+ L + +A CP A + +I+NPVN+TV IAAEV KKAG YD KL GVT LD++R+NTF Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTDVKIKGFSGE-DAKPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLIQQVATTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTF 157 HSP 2 Score: 38.1206 bits (87), Expect = 2.904e-48 Identity = 23/40 (57.50%), Postives = 28/40 (70.00%), Query Frame = 2 Query: 581 VAEVLGLDP*GMLMFLVVGGHAGVTILPLLSQVKPPCSFT 700 VAE+ G P L V+GGH+GVTILPLLSQ+ P +FT Sbjct: 158 VAELKGKKP-AELDVPVIGGHSGVTILPLLSQI-PGVNFT 195
BLAST of CF417249 vs. ExPASy Swiss-Prot
Match: MDHM_YEAST (Malate dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae GN=MDH1 PE=1 SV=2) HSP 1 Score: 181.415 bits (459), Expect = 3.782e-48 Identity = 92/158 (58.23%), Postives = 113/158 (71.52%), Query Frame = 1 Query: 112 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ--LENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTF 579 +KV +LGA GGIGQPL++L+K+N V+ L LYD+ GV D+SH+ T +VV+GF + L NAL D+V+IPAGVPRKPGMTRDDLF INA IVR L A+ PNA + +ISNPVNSTVPI A+V K G Y+PKKL GVT LD +RA F Sbjct: 18 YKVTVLGAGGGIGQPLSLLLKLNHKVTDLRLYDLKGAKGVATDLSHIPTNSVVKGFTPEEPDGLNNALKDTDMVLIPAGVPRKPGMTRDDLFAINASIVRDLAAATAESAPNAAILVISNPVNSTVPIVAQVLKNKGVYNPKKLFGVTTLDSIRAARF 175 HSP 2 Score: 31.5722 bits (70), Expect = 3.782e-48 Identity = 11/16 (68.75%), Postives = 16/16 (100.00%), Query Frame = 2 Query: 629 VVGGHAGVTILPLLSQ 676 V+GGH+G+TI+PL+SQ Sbjct: 191 VIGGHSGITIIPLISQ 206
BLAST of CF417249 vs. ExPASy Swiss-Prot
Match: MDH_ERWCT (Malate dehydrogenase OS=Erwinia carotovora subsp. atroseptica GN=mdh PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 3.785e-48 Identity = 93/157 (59.24%), Postives = 114/157 (72.61%), Query Frame = 1 Query: 115 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTF 579 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH+ T ++G+ G+ + AL G D+V+I AGV RKPGM R DLFN+NAGIVR L E IA CP A + +I+NPVN+TV IAAEV KKAG YD KL GVT LD++R+NTF Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGYSGE-DAKPALAGADIVLISAGVARKPGMDRSDLFNVNAGIVRNLVEQIAITCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTF 157 HSP 2 Score: 35.8094 bits (81), Expect = 3.785e-48 Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 2 Query: 581 VAEVLGLDP*GMLMFLVVGGHAGVTILPLLSQV 679 VAE+ G P + + V+GGH+GVTILPLLSQV Sbjct: 158 VAELKGKQPQDINV-PVIGGHSGVTILPLLSQV 189
BLAST of CF417249 vs. ExPASy Swiss-Prot
Match: MDH_CITK8 (Malate dehydrogenase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=mdh PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 3.785e-48 Identity = 93/157 (59.24%), Postives = 113/157 (71.97%), Query Frame = 1 Query: 115 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTF 579 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH+ T ++GF G+ AL G D+V+I AGV RKPGM R DLFN+NAGIV+ L + IA CP A V +I+NPVN+TV IAAEV KKAG YD KL GVT LD++R+NTF Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP-ALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQIATTCPKACVGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTF 157 HSP 2 Score: 37.3502 bits (85), Expect = 3.785e-48 Identity = 18/24 (75.00%), Postives = 21/24 (87.50%), Query Frame = 2 Query: 629 VVGGHAGVTILPLLSQVKPPCSFT 700 V+GGH+GVTILPLLSQ+ P SFT Sbjct: 173 VIGGHSGVTILPLLSQI-PGVSFT 195
BLAST of CF417249 vs. ExPASy Swiss-Prot
Match: MDH_PHOLL (Malate dehydrogenase OS=Photorhabdus luminescens subsp. laumondii GN=mdh PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 4.933e-48 Identity = 93/157 (59.24%), Postives = 114/157 (72.61%), Query Frame = 1 Query: 115 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTF 579 KVA+LGAAGGIGQ LA+L+K P S L LYD+ TPGV D+SH+ T ++GF G+ AL G ++V+I AGV RKPGM R DLFNINAGIVR L E +AK CP + + +I+NPVN+TV IAAEV KKAG YD +L GVT LDV+R+NTF Sbjct: 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTEVKIKGFAGEDATP-ALEGANVVLISAGVARKPGMDRSDLFNINAGIVRNLVEQVAKTCPKSLIGIITNPVNTTVAIAAEVLKKAGVYDKNRLFGVTTLDVIRSNTF 157 HSP 2 Score: 36.965 bits (84), Expect = 4.933e-48 Identity = 22/40 (55.00%), Postives = 28/40 (70.00%), Query Frame = 2 Query: 581 VAEVLGLDP*GMLMFLVVGGHAGVTILPLLSQVKPPCSFT 700 VAE+ G P + V+GGH+GVTILPLLSQ+ P +FT Sbjct: 158 VAELKGKKP-QEIEVPVIGGHSGVTILPLLSQI-PGVNFT 195
BLAST of CF417249 vs. ExPASy Swiss-Prot
Match: MDH_VIBFM (Malate dehydrogenase OS=Vibrio fischeri (strain MJ11) GN=mdh PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 4.933e-48 Identity = 93/157 (59.24%), Postives = 114/157 (72.61%), Query Frame = 1 Query: 115 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTF 579 KVA++GAAGGIGQ LA+L+K P S L LYD+ TPGV AD+SH+ T ++G+ G+ AL G D+V+I AGV RKPGM R DLFNINAGIV++L E IA CP A + +I+NPVN+TV IAAEV KKAG YD KL GVT LDV+R+ TF Sbjct: 2 KVAVIGAAGGIGQALALLLKNRLPAGSDLALYDIAPVTPGVAADLSHIPTPVSIKGYCGEDPTP-ALEGADVVLISAGVARKPGMDRSDLFNINAGIVKSLTEKIAVTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDVIRSETF 157 HSP 2 Score: 39.6614 bits (91), Expect = 4.933e-48 Identity = 21/34 (61.76%), Postives = 26/34 (76.47%), Query Frame = 2 Query: 581 VAEVLGLDP*GMLMFLVVGGHAGVTILPLLSQVK 682 VAE+ DP G + V+GGH+GVTILPLLSQV+ Sbjct: 158 VAELKDKDP-GEIRVPVIGGHSGVTILPLLSQVE 190
BLAST of CF417249 vs. ExPASy Swiss-Prot
Match: MDH_VIBF1 (Malate dehydrogenase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=mdh PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 4.933e-48 Identity = 93/157 (59.24%), Postives = 114/157 (72.61%), Query Frame = 1 Query: 115 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGVDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTF 579 KVA++GAAGGIGQ LA+L+K P S L LYD+ TPGV AD+SH+ T ++G+ G+ AL G D+V+I AGV RKPGM R DLFNINAGIV++L E IA CP A + +I+NPVN+TV IAAEV KKAG YD KL GVT LDV+R+ TF Sbjct: 2 KVAVIGAAGGIGQALALLLKNRLPAGSDLALYDIAPVTPGVAADLSHIPTPVSIKGYCGEDPTP-ALEGADVVLISAGVARKPGMDRSDLFNINAGIVKSLTEKIAVTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDVIRSETF 157 HSP 2 Score: 39.6614 bits (91), Expect = 4.933e-48 Identity = 21/34 (61.76%), Postives = 26/34 (76.47%), Query Frame = 2 Query: 581 VAEVLGLDP*GMLMFLVVGGHAGVTILPLLSQVK 682 VAE+ DP G + V+GGH+GVTILPLLSQV+ Sbjct: 158 VAELKDKDP-GEIRVPVIGGHSGVTILPLLSQVQ 190 The following BLAST results are available for this feature:
BLAST of CF417249 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 293
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417249 ID=CF417249; Name=CF417249; organism=Citrus sinensis; type=EST; length=700bpback to top |