CF417446
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417446 vs. ExPASy Swiss-Prot
Match: TRXF2_ARATH (Thioredoxin F-type 2, chloroplastic OS=Arabidopsis thaliana GN=At5g16400 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.221e-12 Identity = 33/82 (40.24%), Postives = 54/82 (65.85%), Query Frame = 2 Query: 62 QLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVD-ELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTI 304 ++VV+D WCGPC+ IAP EL++K +++FLK+D + + K +A + + +PTF LK+ K+V +V G+K E+L I Sbjct: 98 KIVVLDMYTQWCGPCKVIAPKYKELSEKYQDMVFLKLDCNQDNKPLAKELGIRVVPTFKILKDNKVVKEVTGAKYEDLLAAI 179
BLAST of CF417446 vs. ExPASy Swiss-Prot
Match: TRXM_PEA (Thioredoxin M-type, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.207e-12 Identity = 39/100 (39.00%), Postives = 61/100 (61.00%), Query Frame = 2 Query: 23 AWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLP-NVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGS-KKEELQQTIAKHL 316 +W+E L +ET V+VDF A WCGPCR IAP + ELAK+ + K++ DE + AT + + ++PT +F K G+ D V+G+ K L + + K++ Sbjct: 76 SWDE-LVIGSETP--VLVDFWAPWCGPCRMIAPIIDELAKEYAGKIKCYKLNTDESPNTATKYGIRSIPTVLFFKNGERKDSVIGAVPKATLSEKVEKYI 172
BLAST of CF417446 vs. ExPASy Swiss-Prot
Match: TRXM_SPIOL (Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 5.495e-12 Identity = 34/91 (37.36%), Postives = 57/91 (62.64%), Query Frame = 2 Query: 53 ETKQLVVVDFTASWCGPCRFIAPFLAELAKKLP-NVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGS-KKEELQQTIAKHLA 319 E++ V+VDF A WCGPC+ IAP + ELAK+ + K++ DE +AT + + ++PT +F K G+ + ++G+ K L +I K+L+ Sbjct: 90 ESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYLS 180
BLAST of CF417446 vs. ExPASy Swiss-Prot
Match: THIO_GRIPA (Thioredoxin OS=Griffithsia pacifica GN=trxA PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 5.495e-12 Identity = 38/89 (42.70%), Postives = 56/89 (62.92%), Query Frame = 2 Query: 56 TKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVL-FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGS-KKEELQQTIAKHL 316 ++Q V+VDF A WCGPCR IA + E+A + L +KV+ D+ ++AT++ + ++PT M GK VD VVG+ K L T+ KHL Sbjct: 18 SRQPVLVDFWAPWCGPCRMIASTIDEIAHDYKDKLKVVKVNTDQNPTIATEYGIRSIPTVMIFINGKKVDTVVGAVPKLTLLNTLQKHL 106
BLAST of CF417446 vs. ExPASy Swiss-Prot
Match: TRXF1_ARATH (Thioredoxin F-type 1, chloroplastic OS=Arabidopsis thaliana GN=At3g02730 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 7.177e-12 Identity = 34/91 (37.36%), Postives = 57/91 (62.64%), Query Frame = 2 Query: 59 KQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVD-ELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAKHLATAS 328 ++LVV+D WCGPC+ IAP L++K +V+FLK+D + + + +A + + +PTF LK+ K+V +V G+K ++L I + AS Sbjct: 87 EKLVVLDMYTQWCGPCKVIAPKYKALSEKYDDVVFLKLDCNPDNRPLAKELGIRVVPTFKILKDNKVVKEVTGAKYDDLVAAIETARSAAS 177
BLAST of CF417446 vs. ExPASy Swiss-Prot
Match: TXND2_MOUSE (Thioredoxin domain-containing protein 2 OS=Mus musculus GN=Txndc2 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.224e-11 Identity = 34/97 (35.05%), Postives = 60/97 (61.86%), Query Frame = 2 Query: 20 EAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAK 310 E + E L+ + E +LV VDF+A+WCGPCR + P L+ K +V+FL+VD ++ + + D + +PTF F K + V + G+ +L+++I++ Sbjct: 419 EEFEEVLKDAGE--KLVAVDFSAAWCGPCRMMKPLFHSLSLKHEDVIFLEVDTEDCEQLVQDCEIFHLPTFQFYKNEEKVGEFSGALVGKLERSISE 513
BLAST of CF417446 vs. ExPASy Swiss-Prot
Match: TRXM_CHLRE (Thioredoxin M-type, chloroplastic OS=Chlamydomonas reinhardtii GN=TRXM PE=1 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 1.224e-11 Identity = 35/90 (38.89%), Postives = 58/90 (64.44%), Query Frame = 2 Query: 53 ETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVL-FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGS-KKEELQQTIAKHL 316 E+ V+VDF A WCGPCR IAP + E+A + + L +K++ DE +VA+++ + ++PT M K GK + ++G+ K + QT+ K+L Sbjct: 50 ESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYL 139
BLAST of CF417446 vs. ExPASy Swiss-Prot
Match: TR548_MIMIV (Thioredoxin-like protein R548 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R548 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.599e-11 Identity = 31/89 (34.83%), Postives = 54/89 (60.67%), Query Frame = 2 Query: 50 NETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDV--DELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAK 310 +E+K LV++DF +WCGPC+ IAP +A+K P V F K++ + L ++ + ++PTF F K GK + + V + L+++I + Sbjct: 46 DESKGLVIIDFFTTWCGPCKRIAPDYIRMAEKYPTVSFYKINAENENLANIVAACEIVSLPTFCFFKAGKYIGRFVNADPVGLEKSIVE 134
BLAST of CF417446 vs. ExPASy Swiss-Prot
Match: GLRX3_XENTR (Glutaredoxin-3 OS=Xenopus tropicalis GN=glrx3 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 1.599e-11 Identity = 31/93 (33.33%), Postives = 55/93 (59.14%), Query Frame = 2 Query: 50 NETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAKHLATAS 328 N K L VV F A W C + +AELAK+ P V+F+K++ + + V+ + V ++PTF+F K + +D++ G+ EL + + +H ++ S Sbjct: 19 NSAKSLTVVHFWAPWAPQCTQMNEVMAELAKEQPQVMFVKLEAEAVPEVSEKYEVTSVPTFLFFKNSQKIDRLDGAHAPELTKRVQRHASSTS 111
BLAST of CF417446 vs. ExPASy Swiss-Prot
Match: THIO_PORYE (Thioredoxin OS=Porphyra yezoensis GN=trxA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.088e-11 Identity = 30/86 (34.88%), Postives = 57/86 (66.28%), Query Frame = 2 Query: 68 VVVDFTASWCGPCRFIAPFLAELAKKL-PNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGS-KKEELQQTIAKHLA 319 V+VDF A WCGPCR ++P + E+A++ ++ +K++ D+ ++A ++ + ++PT M K G+ VD V+G+ K L T+ K+++ Sbjct: 22 VLVDFWAPWCGPCRMVSPVVDEIAEEYESSIKVVKINTDDNPTIAAEYGIRSIPTLMIFKAGERVDTVIGAVPKSTLASTLNKYIS 107 The following BLAST results are available for this feature:
BLAST of CF417446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417446 ID=CF417446; Name=CF417446; organism=Citrus sinensis; type=EST; length=525bpback to top |