CF417446
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417446 vs. ExPASy Swiss-Prot
Match: TRXH_RICCO (Thioredoxin H-type OS=Ricinus communis PE=3 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 5.432e-52 Identity = 96/109 (88.07%), Postives = 105/109 (96.33%), Query Frame = 2 Query: 2 IGCHTVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAKHLATAS 328 IGCHTVEAWNEQLQK N+TK L+VVDFTASWCGPCRFIAPFLAELAKKLPNV FLKVDVDELK+VA +WAVE+MPTFMFLKEGKI+DKVVG+KK+ELQQTIAKH+ATAS Sbjct: 9 IGCHTVEAWNEQLQKGNDTKGLIVVDFTASWCGPCRFIAPFLAELAKKLPNVTFLKVDVDELKTVAHEWAVESMPTFMFLKEGKIMDKVVGAKKDELQQTIAKHMATAS 117
BLAST of CF417446 vs. ExPASy Swiss-Prot
Match: TRXH1_ARATH (Thioredoxin H-type 1 OS=Arabidopsis thaliana GN=TRX1 PE=1 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 1.479e-49 Identity = 91/106 (85.85%), Postives = 100/106 (94.34%), Query Frame = 2 Query: 2 IGCHTVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAKHLA 319 I CHTVE WNEQLQK+NE+K LVVVDFTASWCGPCRFIAPF A+LAKKLPNVLFLKVD DELKSVA+DWA++AMPTFMFLKEGKI+DKVVG+KK+ELQ TIAKHLA Sbjct: 9 IACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA 114
BLAST of CF417446 vs. ExPASy Swiss-Prot
Match: TRXH2_TOBAC (Thioredoxin H-type 2 OS=Nicotiana tabacum PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 8.974e-47 Identity = 88/109 (80.73%), Postives = 99/109 (90.83%), Query Frame = 2 Query: 2 IGCHTVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAKHLATAS 328 IG HTV+AWNE LQK + K+L+VVDFTASWCGPC+FIA F AELAKK+P V FLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVG+KK+ELQQTIAKH+++ S Sbjct: 8 IGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMPTVTFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKDELQQTIAKHISSTS 116
BLAST of CF417446 vs. ExPASy Swiss-Prot
Match: TRXH1_TOBAC (Thioredoxin H-type 1 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 3.529e-43 Identity = 79/108 (73.15%), Postives = 96/108 (88.89%), Query Frame = 2 Query: 5 GCHTVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAKHLATAS 328 GCH VE WNE +K ETK+LVVVDFTASWCGPCRFIAP LA++AKK+P+V+FLKVDVDELK+V+ +W+VEAMPTF+F+K+GK VD+VVG+KKEELQQTI KH A A+ Sbjct: 16 GCHKVEEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMPHVIFLKVDVDELKTVSAEWSVEAMPTFVFIKDGKEVDRVVGAKKEELQQTIVKHAAPAT 123
BLAST of CF417446 vs. ExPASy Swiss-Prot
Match: TRXH5_ARATH (Thioredoxin H-type 5 OS=Arabidopsis thaliana GN=TRX5 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 7.127e-36 Identity = 63/104 (60.58%), Postives = 88/104 (84.62%), Query Frame = 2 Query: 2 IGCHTVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAKH 313 I CHT+E WNE+++ +NE+K+L+V+DFTASWC PCRFIAP AE+AKK NV+F K+DVDEL++VA ++ VEAMPTF+F+KEG I+D+VVG+ K+E+ + + KH Sbjct: 8 IACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111
BLAST of CF417446 vs. ExPASy Swiss-Prot
Match: TRXH_PICMA (Thioredoxin H-type OS=Picea mariana GN=SB09 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 2.994e-34 Identity = 63/107 (58.88%), Postives = 84/107 (78.50%), Query Frame = 2 Query: 8 CHTVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAKHLATAS 328 CH+ E W +LQ++ +TK+LV VDFTA+WCGPCR I P EL+KK P + FLKVDVDEL+ VA +W VEAMPTF+F+K+GK VDKVVG+KK++L++ +A A A+ Sbjct: 9 CHSTEGWRSKLQEAIDTKRLVAVDFTATWCGPCRVIGPVFVELSKKFPEIFFLKVDVDELRDVAQEWDVEAMPTFIFIKDGKAVDKVVGAKKDDLERKVAALAAAAT 115
BLAST of CF417446 vs. ExPASy Swiss-Prot
Match: TRXH_FAGES (Thioredoxin H-type OS=Fagopyrum esculentum PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 1.941e-33 Identity = 61/104 (58.65%), Postives = 85/104 (81.73%), Query Frame = 2 Query: 2 IGCHTVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAKH 313 I CHTV+ WNE+ QK+ ++ +L+V+DFTASWCGPCR I P+++ELAKK P+V F KVDVD+LK VA ++ VEAMP+F+ LKEG+ V+++VG++K+EL IA H Sbjct: 8 IACHTVQEWNEKFQKAKDSGKLIVIDFTASWCGPCRVITPYVSELAKKFPHVAFFKVDVDDLKDVAEEYKVEAMPSFVILKEGQEVERIVGARKDELLHKIAVH 111
BLAST of CF417446 vs. ExPASy Swiss-Prot
Match: TRXH_ORYSJ (Thioredoxin H-type OS=Oryza sativa subsp. japonica GN=TRXH PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 3.311e-33 Identity = 63/110 (57.27%), Postives = 83/110 (75.45%), Query Frame = 2 Query: 2 IGCHTVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAKHLATASA 331 I CH + ++ Q+ K+ E ++V++DFTASWCGPCRFIAP AE AKK P +FLKVDVDELK VA + VEAMPTF+F+K+G DKVVG++K++LQ TI KH+ +A Sbjct: 9 IACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKHVGATAA 118
BLAST of CF417446 vs. ExPASy Swiss-Prot
Match: TRXH_ORYSI (Thioredoxin H-type OS=Oryza sativa subsp. indica GN=TRXH PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 3.311e-33 Identity = 63/110 (57.27%), Postives = 83/110 (75.45%), Query Frame = 2 Query: 2 IGCHTVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAKHLATASA 331 I CH + ++ Q+ K+ E ++V++DFTASWCGPCRFIAP AE AKK P +FLKVDVDELK VA + VEAMPTF+F+K+G DKVVG++K++LQ TI KH+ +A Sbjct: 9 IACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKHVGATAA 118
BLAST of CF417446 vs. ExPASy Swiss-Prot
Match: TRXH3_ARATH (Thioredoxin H-type 3 OS=Arabidopsis thaliana GN=TRX3 PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.643e-32 Identity = 63/110 (57.27%), Postives = 86/110 (78.18%), Query Frame = 2 Query: 2 IGCHTVEAWNEQLQKSNETKQLVVVDFTASWCGPCRFIAPFLAELAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGSKKEELQQTIAKHLATASA 331 I CHTVE W E+L+ +NE+K+L+V+DFTA+WC PCRFIAP A+LAKK +V+F KVDVDEL +VA ++ V+AMPTF+F+KEG+I + VVG+ KEE+ + KH +A Sbjct: 8 IACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKTVVAA 117 The following BLAST results are available for this feature:
BLAST of CF417446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417446 ID=CF417446; Name=CF417446; organism=Citrus sinensis; type=EST; length=525bpback to top |