CF417464
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417464 vs. ExPASy Swiss-Prot
Match: EF1D2_ARATH (Elongation factor 1-delta 2 OS=Arabidopsis thaliana GN=At2g18110 PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 4.549e-54 Identity = 105/198 (53.03%), Postives = 118/198 (59.60%), Query Frame = 1 Query: 43 AFDNVNSATGLKKLDEYLLTRSYITGYQASKDDITVYSALSKAPSSEYVNVSRWYKHIDALLRIXXXXXXXXXXXXXXXAPV------ATXXXXXXXXXXXXXXXXXXXLFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDL 618 AF N+NS +GLKKLDE+LLTRSYITGYQASKDDITV++ALSK P+SE+VNVSRW+ HIDALLRI +P+ LFG VL+D+KPWDDETDMKKLEEAVRS+QMEGL WGASKL PVGYGIKKL IM TIVDDL Sbjct: 3 AFPNLNSGSGLKKLDEHLLTRSYITGYQASKDDITVFTALSKPPTSEFVNVSRWFNHIDALLRISGVSAEGSGVIVEGSSPITEEAVATPPAADSKDTAAEEEDDDDVDLFGEETEEEKKAAEERAASVKASTKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSIQMEGLFWGASKLVPVGYGIKKLHIMCTIVDDL 200 HSP 2 Score: 41.2022 bits (95), Expect = 4.549e-54 Identity = 18/23 (78.26%), Postives = 20/23 (86.96%), Query Frame = 2 Query: 620 VSVDTLIEEHLLEEPINEYVQSC 688 VS+DT+IEE L EPINEYVQSC Sbjct: 201 VSIDTMIEEQLTVEPINEYVQSC 223
BLAST of CF417464 vs. ExPASy Swiss-Prot
Match: EF1D1_ARATH (Elongation factor 1-delta 1 OS=Arabidopsis thaliana GN=At1g30230 PE=2 SV=2) HSP 1 Score: 189.119 bits (479), Expect = 1.008e-53 Identity = 104/198 (52.53%), Postives = 117/198 (59.09%), Query Frame = 1 Query: 43 AFDNVNSATGLKKLDEYLLTRSYITGYQASKDDITVYSALSKAPSSEYVNVSRWYKHIDALLRIXXXXXXXXXXXXXXXAPV------ATXXXXXXXXXXXXXXXXXXXLFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDL 618 AF N+NS GLKKLDE+LLTRSYITGYQASKDDITV++AL+K P+S+YVN SRWY HIDALLRI AP+ LFG VL+D+KPWDDETDMKKLEEAV+S+QMEGL WGASKL PVGYGIKKLQI+ TIVDDL Sbjct: 3 AFPNLNSDAGLKKLDEHLLTRSYITGYQASKDDITVFAALAKPPTSQYVNASRWYNHIDALLRISGVSAEGSGVIVEGSAPITEEAVATPPAADSKDAAADEEDDDDVDLFGEETEEEKKAAEERAASVKASTKKKESGKSSVLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVPVGYGIKKLQILCTIVDDL 200 HSP 2 Score: 41.2022 bits (95), Expect = 1.008e-53 Identity = 18/23 (78.26%), Postives = 20/23 (86.96%), Query Frame = 2 Query: 620 VSVDTLIEEHLLEEPINEYVQSC 688 VS+DT+IEE L EPINEYVQSC Sbjct: 201 VSIDTMIEEQLTVEPINEYVQSC 223
BLAST of CF417464 vs. ExPASy Swiss-Prot
Match: EF1D_PIMBR (Elongation factor 1-delta OS=Pimpinella brachycarpa PE=2 SV=3) HSP 1 Score: 182.57 bits (462), Expect = 1.294e-50 Identity = 100/195 (51.28%), Postives = 117/195 (60.00%), Query Frame = 1 Query: 34 MAVAFDNVNSATGLKKLDEYLLTRSYITGYQASKDDITVYSALSKAPSSEYVNVSRWYKHIDALLRIXXXXXXXXXXXXXXXAPVATXXXXXXXXXXXXXXXXXXXLFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDL 618 MAV F +++S GL+KLDEYLL+RSYI+GYQASKDD+ V++AL+K PSS+YVNVSRWY H++ALLRI + LFG VLLDVKPWDDETDM KLEEAVRS++M+GLLWGASKL VGYGIKKLQIMLTIVDDL Sbjct: 1 MAVTFYDLSSEAGLEKLDEYLLSRSYISGYQASKDDLAVHAALAKPPSSKYVNVSRWYNHVEALLRISGVSAEGCGVTVEGSSVATPPVADTKASAAEDDDDDDVDLFGEETEEEKKASEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRSIKMDGLLWGASKLVAVGYGIKKLQIMLTIVDDL 195 HSP 2 Score: 37.3502 bits (85), Expect = 1.294e-50 Identity = 15/23 (65.22%), Postives = 19/23 (82.61%), Query Frame = 2 Query: 620 VSVDTLIEEHLLEEPINEYVQSC 688 VSVD L+E++L EP NEY+QSC Sbjct: 196 VSVDDLVEDYLTAEPANEYIQSC 218
BLAST of CF417464 vs. ExPASy Swiss-Prot
Match: EF1D_BETVU (Elongation factor 1-delta OS=Beta vulgaris PE=2 SV=3) HSP 1 Score: 172.555 bits (436), Expect = 1.989e-48 Identity = 106/200 (53.00%), Postives = 115/200 (57.50%), Query Frame = 1 Query: 34 MAVAFDNVNSATGLKKLDEYLLTRSYITGYQASKDDITVYSALSKAPSSEYVNVSRWYKHIDALLRIXXXXXXXXXXXXXXXAP---VATXXXXXXXXXXXXXXXXXXX-LFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDL 618 MAV F +++S GL LD YLL+RSYITGYQASKDD+TV+SA+ KA + YVNVSRWYKHIDALLRI AP VAT LFG VLLDVKPWDDETDMKKLEEAVRSVQ EGL GASKL PVGYGIKKL IM+TIVDDL Sbjct: 1 MAVTFSDLSSPAGLDSLDAYLLSRSYITGYQASKDDLTVFSAVPKASLASYVNVSRWYKHIDALLRISGVSGEGSGVTVEGNAPASDVATPPAADSKASAADDDDDDDVDLFGEETEEEKKAAEERAAAAAAKPAKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQQEGLTLGASKLVPVGYGIKKLTIMMTIVDDL 200 HSP 2 Score: 40.0466 bits (92), Expect = 1.989e-48 Identity = 18/23 (78.26%), Postives = 20/23 (86.96%), Query Frame = 2 Query: 620 VSVDTLIEEHLLEEPINEYVQSC 688 VSVD LIE++L EPINEYVQSC Sbjct: 201 VSVDNLIEDYLTVEPINEYVQSC 223
BLAST of CF417464 vs. ExPASy Swiss-Prot
Match: EF1D1_ORYSJ (Elongation factor 1-delta 1 OS=Oryza sativa subsp. japonica GN=Os07g0614500 PE=2 SV=3) HSP 1 Score: 185.652 bits (470), Expect = 2.075e-46 Identity = 107/198 (54.04%), Postives = 118/198 (59.60%), Query Frame = 1 Query: 34 MAVAFDNVNSATGLKKLDEYLLTRSYITGYQASKDDITVYSALSKAPSSEYVNVSRWYKHIDALLRIXXXXXXXXXXXXXXXA-PVATXXXXXXXXXXXXXXXXXXX--LFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDL 618 MAV+F NV+S GLKKLDEYLLTRSYI+GYQAS DD+ VYSA S APSS Y NV+RW+ HIDALLR+ A P A+ LFG VLLDVKPWDDETDM KLEEAVR+V+MEGLLWGASKL PVGYGIKKLQIM+TIVDDL Sbjct: 1 MAVSFTNVSSEAGLKKLDEYLLTRSYISGYQASNDDLAVYSAFSTAPSSSYTNVARWFTHIDALLRLSGVTADGQGVKVESTAVPSASTPDVADAKAPAADDDDDDDVDLFGEETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRNVKMEGLLWGASKLVPVGYGIKKLQIMMTIVDDL 198
BLAST of CF417464 vs. ExPASy Swiss-Prot
Match: EF1D2_ORYSJ (Elongation factor 1-delta 2 OS=Oryza sativa subsp. japonica GN=Os03g0406200 PE=2 SV=3) HSP 1 Score: 184.111 bits (466), Expect = 6.037e-46 Identity = 101/195 (51.79%), Postives = 115/195 (58.97%), Query Frame = 1 Query: 34 MAVAFDNVNSATGLKKLDEYLLTRSYITGYQASKDDITVYSALSKAPSSEYVNVSRWYKHIDALLRIXXXXXXXXXXXXXXXAPVATXXXXXXXXXXXXXXXXXXXLFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDL 618 MA+ NVNS GL+KLDEYLLTRSYI+GYQASKDD+TV+++L AP++ YVNV+RWY HI ALLR A + LFG VLLDVKPWDDETDM KLEEAVR+V+MEGLLWGASKL PVGYGIKKLQIM+TIVDDL Sbjct: 1 MAITLSNVNSEAGLQKLDEYLLTRSYISGYQASKDDMTVFTSLPSAPAASYVNVTRWYDHISALLRSSGVTAEGEGVKVESTACSVSPTADQKAPAADEEDDDDVDLFGEETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMAKLEEAVRNVKMEGLLWGASKLVPVGYGIKKLQIMMTIVDDL 195
BLAST of CF417464 vs. ExPASy Swiss-Prot
Match: EF1B1_ARATH (Elongation factor 1-beta 1 OS=Arabidopsis thaliana GN=At5g12110 PE=2 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 6.748e-36 Identity = 81/197 (41.12%), Postives = 100/197 (50.76%), Query Frame = 1 Query: 34 MAVAFDNVNSATGLKKLDEYLLTRSYITGYQASKDDITVYSALSKAPSSEYVNVSRWYKHIDALLRIXXXXXXXXXXXXXXXAPV--ATXXXXXXXXXXXXXXXXXXXLFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDL 618 MAV F ++++ GLK L+E+L ++YI+G Q S DD+ VY+A+ + P + N S+WY + + L AP A LF VLL+VKPWDDETDMKKLEEAVRSVQM GL WGASKL PVGYGIKKL IM+TIVDDL Sbjct: 1 MAVTFSDLHTERGLKTLEEHLAGKTYISGDQLSVDDVKVYAAVLENPGDGFPNASKWYDSVASHLAKSFPGKADGVRVGGGVAPPSEAHPHTEEPAADGDGDDDDDIDLFADETEDEKKAAEEREAAKKDTKKTKESGKSSVLLEVKPWDDETDMKKLEEAVRSVQMPGLTWGASKLVPVGYGIKKLTIMMTIVDDL 197 HSP 2 Score: 36.5798 bits (83), Expect = 6.748e-36 Identity = 16/22 (72.73%), Postives = 18/22 (81.82%), Query Frame = 2 Query: 620 VSVDTLIEEHLLEEPINEYVQS 685 VSVD LIE+HL EP NEY+QS Sbjct: 198 VSVDNLIEDHLTSEPNNEYIQS 219
BLAST of CF417464 vs. ExPASy Swiss-Prot
Match: EF1B2_ARATH (Elongation factor 1-beta 2 OS=Arabidopsis thaliana GN=At5g19510 PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 3.297e-35 Identity = 76/195 (38.97%), Postives = 100/195 (51.28%), Query Frame = 1 Query: 34 MAVAFDNVNSATGLKKLDEYLLTRSYITGYQASKDDITVYSALSKAPSSEYVNVSRWYKHIDALLRIXXXXXXXXXXXXXXXAPVATXXXXXXXXXXXXXXXXXXXLFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDL 618 MAV F ++++ G+K ++E+L ++YI+G Q S DD+ VY+A+ PS + N S+WY+ + + ++ + A LFG VL+DVKPWDDETDMKKLEEAVR V+M GL WGASKL PVGYGIKKL IM TIVDDL Sbjct: 1 MAVTFSDLHTEEGVKSVEEHLAGKTYISGDQLSVDDVKVYAAVPVKPSDAFPNASKWYESVAS--QLAKSFPGKAVGVQFGGSAAAAPAVEAEAPAAAADDDDDMDLFGDETEEEKKAAEEREAAKKDTKKPKESGKSSVLMDVKPWDDETDMKKLEEAVRGVEMPGLFWGASKLVPVGYGIKKLTIMFTIVDDL 193 HSP 2 Score: 34.2686 bits (77), Expect = 3.297e-35 Identity = 15/23 (65.22%), Postives = 17/23 (73.91%), Query Frame = 2 Query: 620 VSVDTLIEEHLLEEPINEYVQSC 688 VS D LIE+ L EP NEY+QSC Sbjct: 194 VSPDNLIEDFLTSEPNNEYIQSC 216
BLAST of CF417464 vs. ExPASy Swiss-Prot
Match: EF1B_ORYSJ (Elongation factor 1-beta OS=Oryza sativa subsp. japonica GN=Os07g0662500 PE=1 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 1.550e-31 Identity = 54/56 (96.43%), Postives = 54/56 (96.43%), Query Frame = 1 Query: 451 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDL 618 VLLDVKPWDDETDMKKLEEAVRSVQMEGL WGASKL PVGYGIKKLQIMLTIVDDL Sbjct: 138 VLLDVKPWDDETDMKKLEEAVRSVQMEGLTWGASKLVPVGYGIKKLQIMLTIVDDL 193 HSP 2 Score: 45.0542 bits (105), Expect = 1.550e-31 Identity = 20/23 (86.96%), Postives = 22/23 (95.65%), Query Frame = 2 Query: 620 VSVDTLIEEHLLEEPINEYVQSC 688 VSVD+LIEEHL EEPINE+VQSC Sbjct: 194 VSVDSLIEEHLTEEPINEFVQSC 216
BLAST of CF417464 vs. ExPASy Swiss-Prot
Match: EF1B_WHEAT (Elongation factor 1-beta OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 2.468e-23 Identity = 51/56 (91.07%), Postives = 54/56 (96.43%), Query Frame = 1 Query: 451 VLLDVKPWDDETDMKKLEEAVRSVQMEGLLWGASKLAPVGYGIKKLQIMLTIVDDL 618 VL+D+KPWDDETDMKKLEEAVRSVQMEGL WGASKL PVGYGIKKLQIMLTI+DDL Sbjct: 132 VLMDIKPWDDETDMKKLEEAVRSVQMEGLTWGASKLMPVGYGIKKLQIMLTIIDDL 187 The following BLAST results are available for this feature:
BLAST of CF417464 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417464 ID=CF417464; Name=CF417464; organism=Citrus sinensis; type=EST; length=690bpback to top |