CF417607
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PP359_ARATH (Pentatricopeptide repeat-containing protein At4g39952, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E98 PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 8.284e-16 Identity = 39/95 (41.05%), Postives = 58/95 (61.05%), Query Frame = 2 Query: 194 RAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWV 478 R+G L+EA S + MP +P +WG LL+ C HG E+ A+R + G ++L+N Y+AAG+WE+A +AR+M+R+ GV K G S V Sbjct: 681 RSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PPR80_ARATH (Pentatricopeptide repeat-containing protein At1g53600, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E63 PE=2 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.082e-15 Identity = 46/136 (33.82%), Postives = 71/136 (52.21%), Query Frame = 2 Query: 173 CSKKWKGRAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLEELGEEME 580 C GR+G L +A ++I MP P VWG+LL+ + H +LA AA ++ EL S V+LS Y+ G+ D + + + + +KK+ G SW+ VH F+AGD + EI L+ + +EME Sbjct: 580 CMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEIGFTLKMIRKEME 715
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PP253_ARATH (Putative pentatricopeptide repeat-containing protein At3g25060, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E96 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.082e-15 Identity = 44/139 (31.65%), Postives = 74/139 (53.24%), Query Frame = 2 Query: 161 KCLICSKKWKGRAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLEELGEEM 577 K +C RAG+++EA+ +I + +W ALL+GC H N + AA+++ +L S G+ L+SN +A A +W++ AK RK++R+ ++K G S +E + TF+ D H + Q L L E+ Sbjct: 455 KHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLKTEI 593
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PP268_ARATH (Putative pentatricopeptide repeat-containing protein At3g47840 OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.413e-15 Identity = 46/122 (37.70%), Postives = 69/122 (56.56%), Query Frame = 2 Query: 194 RAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLE 559 RAG+L +A +I +M + VW LL C+ G+ E AA+R+ EL V L+N Y++ G E+AA RK ++ +GV KE G S ++ + V FV+GDR H ++ +IY LE Sbjct: 560 RAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILE 681
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PP197_ARATH (Pentatricopeptide repeat-containing protein At2g40720 OS=Arabidopsis thaliana GN=PCMP-E26 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.413e-15 Identity = 45/129 (34.88%), Postives = 67/129 (51.94%), Query Frame = 2 Query: 191 GRAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLEELGEEM 577 GRAG L+EA S I+ MPI S+W LL+ R H N EL +A+++ + V L N Y AG +AAK +++++G+ K+ G SW+E +R + F +G EI+ L L M Sbjct: 725 GRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNM 853
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PP369_ARATH (Pentatricopeptide repeat-containing protein At5g08305 OS=Arabidopsis thaliana GN=PCMP-E105 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.846e-15 Identity = 49/128 (38.28%), Postives = 70/128 (54.69%), Query Frame = 2 Query: 194 RAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLEELGEEM 577 RAG +++A I +MPI PT S+ GALL GC HGN ELA ++ EL + G V L+N YA ++ A R+ + +GVKK G S ++ H F+A D+ H + +IY L+ G M Sbjct: 391 RAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVLQLTGAWM 518
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PPR14_ARATH (Pentatricopeptide repeat-containing protein At1g06140, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E61 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.148e-15 Identity = 43/105 (40.95%), Postives = 58/105 (55.24%), Query Frame = 2 Query: 173 CSKKWKGRAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEG 487 C GRAG++ EA S I+ MP+ P S WGALL+ CRIH +LA A+++ + + VLLSN YA AG WE R+ + +G +K G S E G Sbjct: 454 CMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEVG 558
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PP394_ARATH (Pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.148e-15 Identity = 42/102 (41.18%), Postives = 58/102 (56.86%), Query Frame = 2 Query: 173 CSKKWKGRAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWV 478 C G+AG+L+EA +I+KMP+ +WG LL+ R HGN E+A AA + + G V+LSN YA AGRWED A R+ +R + V+ S V Sbjct: 583 CMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVEWSRAFSGV 684
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PP119_ARATH (Putative pentatricopeptide repeat-containing protein At1g74400 OS=Arabidopsis thaliana GN=PCMP-E68 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.148e-15 Identity = 42/107 (39.25%), Postives = 61/107 (57.01%), Query Frame = 2 Query: 194 RAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAG 514 R+G L++A I +MPI P +W LL C +HGN EL R+FEL G V LSN YA+ G W++ +K R +R ++ G SW+E G+ ++ FV+G Sbjct: 324 RSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRK---RRMPGKSWIELGSIINEFVSG 427
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PPR88_ARATH (Pentatricopeptide repeat-containing protein At1g62260, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E10 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.013e-15 Identity = 40/94 (42.55%), Postives = 57/94 (60.64%), Query Frame = 2 Query: 200 GKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVE 481 G+ +EA+ +I MP P ++VWGALL CRI+ N LA AA+ + L S VLL N YA G W++A++ R + + +KKE G SWV+ Sbjct: 560 GQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653 The following BLAST results are available for this feature:
BLAST of CF417607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417607 ID=CF417607; Name=CF417607; organism=Citrus sinensis; type=EST; length=683bpback to top |