CF417607
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PP429_ARATH (Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 6.458e-69 Identity = 127/164 (77.44%), Postives = 146/164 (89.02%), Query Frame = 2 Query: 191 GRAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLEELGEEMEKAGYVPDTSFVLRKVDGDEKNQTIRYHSERLAIA 682 GRAG+LQEA+ VI MPI PTESVWGALLT C +H NTELAA+AAD+VFELG VS GM++ LSNAYAA GR+EDAAKARK+LRD+G KKETGLSWVEE N+VHTF AG+R H +++EIY+KL ELGEEMEKAGY+ DTS+VLR+VDGDEKNQTIRYHSERLAIA Sbjct: 364 GRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIA 527 HSP 2 Score: 68.9366 bits (167), Expect = 2.758e-11 Identity = 33/49 (67.35%), Postives = 38/49 (77.55%), Query Frame = 1 Query: 49 KCGVIEPAYRVFEEVRVRNLGMWNAMLIACAQHSHMNKVFDLFKEMERS 195 KCGV E AY+VF EV V+NLG+WNAML A AQHSH KV +LFK M+ S Sbjct: 264 KCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLS 312
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PP252_ARATH (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 9.391e-44 Identity = 85/164 (51.83%), Postives = 113/164 (68.90%), Query Frame = 2 Query: 191 GRAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLEELGEEMEKAGYVPDTSFVLRKVDGDEKNQTIRYHSERLAIA 682 GRAG L A+ IE+MPI PT ++W ALL CR+H NTEL AYAA+ VFEL PG +V+L N YA+ GRW DAA+ RK +++ GVKKE SWVE N +H FVA D H + EI +K EE+ ++++ GYVPDTS V+ VD E+ ++YHSE++A+A Sbjct: 409 GRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALA 572
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana GN=PCMP-H24 PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 7.950e-43 Identity = 86/170 (50.59%), Postives = 112/170 (65.88%), Query Frame = 2 Query: 173 CSKKWKGRAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLEELGEEMEKAGYVPDTSFVLRKVDGDEKNQTIRYHSERLAIA 682 C GRAG L++A ++++ MP P ++WG LL R+HGNTELA AAD++F + + GM VLLSN YA++GRW D K R +RD+GVKK G SW+E N+ HTF GD H EI+ LEEL M+KAGYV TS VL V+ +EK + +RYHSERLA+A Sbjct: 551 CMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVA 720
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PPR57_ARATH (Pentatricopeptide repeat-containing protein At1g25360 OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 8.790e-42 Identity = 81/164 (49.39%), Postives = 110/164 (67.07%), Query Frame = 2 Query: 194 RAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLEELGEEMEKAGYVPDTSFVLRKVDGD-EKNQTIRYHSERLAIA 682 R+GK +A SVIE +P PT +W ALL+GCR+HGN EL AAD++F L G +LLSN +AA G+WE+ A+ RK++RD+GVKKE SW+E +VHTF+ D H +Y L++LG+EM + GYVPDTSFVL V+ D K + HSE++A+A Sbjct: 566 RSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVA 729
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PP168_ARATH (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana GN=PCMP-H41 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.552e-38 Identity = 78/164 (47.56%), Postives = 108/164 (65.85%), Query Frame = 2 Query: 191 GRAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLEELGEEMEKAGYVPDTSFVLRKVDGDEKNQTIRYHSERLAIA 682 GRAG LQEA IEKMPI P WG+LL+ CR+H N +L AA+R+ L + G L+N Y+A G+WE+AAK RK ++D VKKE G SW+E ++VH F D H EIY ++++ +E++K GYVPDT+ VL ++ + K Q +R+HSE+LAIA Sbjct: 562 GRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIA 725
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PP271_ARATH (Putative pentatricopeptide repeat-containing protein At3g49140 OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.700e-38 Identity = 76/171 (44.44%), Postives = 110/171 (64.33%), Query Frame = 2 Query: 167 LICSKKWKGRAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLEELGEEMEKAGYVPDTSFVLRKVDGDEKNQTIRYHSERLAI 679 L C GRAGK++EA I+ M + P E VWGALL CR+H +T++ AAD++F+L G VLLSN YA AGRWE+ R +++ +G+KK G S VE +HTF+ GDR H ++ EIY++L+ L ++M++ GYVPD+ L V+ ++K + HSE+LAI Sbjct: 449 LACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAI 619
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PPR53_ARATH (Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2) HSP 1 Score: 155.606 bits (392), Expect = 2.240e-37 Identity = 74/169 (43.79%), Postives = 106/169 (62.72%), Query Frame = 2 Query: 173 CSKKWKGRAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLEELGEEMEKAGYVPDTSFVLRKVDGDEKNQTIRYHSERLAI 679 C GRAGKLQEA +I++MP P VWGALL CR+ N +LA AA+++F L +PG VLLSN YAA G W + R + G+KK G SW++ NRV+T +AGD+ H + +I +K++E+ +EM K+G+ P+ F L V+ E+ Q + HSE+LA+ Sbjct: 530 CMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAV 698
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PP390_ARATH (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.240e-37 Identity = 77/164 (46.95%), Postives = 103/164 (62.80%), Query Frame = 2 Query: 191 GRAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLEELGEEMEKAGYVPDTSFVLRKVDGDEKNQTIRYHSERLAIA 682 GRAG+L A+ +IE+MP+ P VW A L+ CRIHG EL YAA+++ EL G LLSN YA AGRW+D + R ++R +GVKK G SWVE TF GD+ H +EIYQ L + + ++ GYVP+T F L VD +EK+ + HSE+LA+A Sbjct: 626 GRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALA 789
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PP172_ARATH (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.240e-37 Identity = 73/170 (42.94%), Postives = 106/170 (62.35%), Query Frame = 2 Query: 173 CSKKWKGRAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLEELGEEMEKAGYVPDTSFVLRKVDGDEKNQTIRYHSERLAIA 682 C RAG+L++A+ VIE MP ++W +L CR+H TEL AA+++ + VLLSN YA +G W++ AK RK++ ++ VKKE G SW+E N+ ++F+AGDR H +IY KLE+L ++ GY PDTS+VL+ +D + K + HSERLAIA Sbjct: 637 CMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIA 806
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PP312_ARATH (Pentatricopeptide repeat-containing protein At4g14850 OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.822e-37 Identity = 78/170 (45.88%), Postives = 104/170 (61.18%), Query Frame = 2 Query: 173 CSKKWKGRAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLEELGEEMEKAGYVPDTSFVLRKVDGDEKNQTIRYHSERLAIA 682 C GRAG ++ A I+KMPI PT SVWGAL CR+HG +L AA+ +F+L G +VLLSN +AAAGRW +A R+ L+ G+KK G SW+ N+VH F A DR H+ +EI L +L EME AGY PD L ++ +EK + +HSE+LA+A Sbjct: 454 CIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALA 623 The following BLAST results are available for this feature:
BLAST of CF417607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417607 ID=CF417607; Name=CF417607; organism=Citrus sinensis; type=EST; length=683bpback to top |