CF417607
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PP417_ARATH (Pentatricopeptide repeat-containing protein At5g44230 OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.399e-31 Identity = 72/171 (42.11%), Postives = 102/171 (59.65%), Query Frame = 2 Query: 173 CSKKWKGRAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGN-RVHTFVAGDRCHVRTREIYQKLEELGEEMEKAGYVPDTSFVLRKVDGDEKNQTIRYHSERLAIA 682 C GR G+LQEA+ +I+ M + P VWGALL CRIH N E+A AA+ +FEL G +LLSN YA+AG W + RK+++++G+KK +SWV + N ++H F G+ H + +I KLEEL E + GY PD S V V + K + H+E+LA+A Sbjct: 426 CMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALA 596
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PP108_ARATH (Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.191e-30 Identity = 69/163 (42.33%), Postives = 98/163 (60.12%), Query Frame = 2 Query: 194 RAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLEELGEEMEKAGYVPDTSFVLRKVDGDEKNQTIRYHSERLAIA 682 R+G+L+EA+ I MP P W LL+ CR GN E+ +AA+ + EL P LLS+ YA+ G+W+ A+ R+ +R++ VKKE G SW++ ++H+F A D +IY KLEEL ++ GY PDTSFV V+ K + + YHSERLAIA Sbjct: 520 RSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIA 682
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PP145_ARATH (Pentatricopeptide repeat-containing protein At2g02980 OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 2.031e-30 Identity = 68/163 (41.72%), Postives = 101/163 (61.96%), Query Frame = 2 Query: 194 RAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLEELGEEMEKAGYVPDTSFVLR-KVDGDEKNQTIRYHSERLAI 679 RAG L++A I+K+PI+PT +W LL C H N +LA ++R+FEL G V+LSN YA +WE RK+++D+ K G S +E N VH F +GD T ++++ L+E+ +E++ +GYVPDTS V+ ++ EK T+RYHSE+LAI Sbjct: 379 RAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAI 541
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PPR45_ARATH (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.464e-30 Identity = 67/164 (40.85%), Postives = 95/164 (57.93%), Query Frame = 2 Query: 191 GRAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLEELGEEMEKAGYVPDTSFVLRKVDGDEKNQTIRYHSERLAIA 682 GRAG+LQEA I+KMP+ P +VWGALL CRIH +L +A +FEL S G +LL N YA G+W + AK R+M+++ G+ + G SWVE +VH F++ D+ H +T+EI LE E+M + G + +++ HSER AIA Sbjct: 644 GRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDETEISRDEIFCGHSERKAIA 807
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.464e-30 Identity = 65/164 (39.63%), Postives = 101/164 (61.59%), Query Frame = 2 Query: 191 GRAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLEELGEEMEKAGYVPDTSFVLRKVDGDEKNQTIRYHSERLAIA 682 GRAG L +A VI+ MP+ P +VWGALL+ C+ H + EL YAA ++F + + G V LSN YAAA W+ A+ R ++++G+ K+ G SWVE R+ F GD+ H R EI +++E + +++ G+V + L ++ +E +T+ HSER+AIA Sbjct: 470 GRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIA 633
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PP320_ARATH (Pentatricopeptide repeat-containing protein At4g18750, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.008e-29 Identity = 69/170 (40.59%), Postives = 97/170 (57.06%), Query Frame = 2 Query: 173 CSKKWKGRAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLEELGEEMEKAGYVPDTSFVLRKVDGDEKNQTIRYHSERLAIA 682 C R G L +A IE MPI P ++WGALL GCRIH + +LA A++VFEL + G VL++N YA A +WE + RK + +G++K G SW+E RV+ FVAGD + T I L ++ M + GY P T + L + EK + + HSE+LA+A Sbjct: 641 CIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMA 810
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PPR71_ARATH (Pentatricopeptide repeat-containing protein At1g34160 OS=Arabidopsis thaliana GN=PCMP-H68 PE=2 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 1.316e-29 Identity = 64/163 (39.26%), Postives = 99/163 (60.74%), Query Frame = 2 Query: 194 RAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLEELGEEMEKAGYVPDTSFVLRKVDGDEKNQTIRYHSERLAIA 682 RAG+L+EA +I M + P +W +LL I+ + E+A A+ + E+G+ + G VLLSN YAA GRW+D + R + + VKK GLS++E +H F D+ H + REIY+K++E+ ++ + GYV T VL + +EK + YHSE+LA+A Sbjct: 355 RAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVA 517
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PPR84_ARATH (Pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.719e-29 Identity = 71/171 (41.52%), Postives = 97/171 (56.73%), Query Frame = 2 Query: 173 CSKKWKGRAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGD-RCHVRTREIYQKLEELGEEMEKAGYVPDTSFVLRKVDGDEKNQTIRYHSERLAIA 682 C+ GRAG++ +A+ +IE M I P +VWGALL C+ H +LA AA ++FE + G VLLS+ A+ +W D A RK +R V K G SW+E G +VH F G + H I LE+ + +AGY PD S VL VD +EK ++ HSERLA+A Sbjct: 473 CTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVA 643
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PP265_ARATH (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 3.830e-29 Identity = 64/170 (37.65%), Postives = 104/170 (61.18%), Query Frame = 2 Query: 173 CSKKWKGRAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLEELGEEMEKAGYVPDTSFVLRKVDGDEKNQTIRYHSERLAIA 682 C GRA +L EA +++ M P VWG+LL CRIHGN ELA A+ R+F L + G VLL++ YA A W++ + +K+L +G++K G W+E ++++FV+ D + +I+ L +L E+M++ GY+P T VL +++ +EK + + HSE+LA+A Sbjct: 427 CMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALA 596
BLAST of CF417607 vs. ExPASy Swiss-Prot
Match: PP122_ARATH (Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.003e-29 Identity = 73/171 (42.69%), Postives = 100/171 (58.48%), Query Frame = 2 Query: 173 CSKKWKGRAGKLQEAISVIEKMPIAPTESVWGALLTGCRIHGNTELAAYAADRVFELGIVSPGMNVLLSNAYAAAGRWEDAAKARKMLRDQGVKKETGLSWVEEGNRVHTFVAGDRCHVRTREIYQKLEELGEEM-EKAGYVPDTSFVLRKVDGDEKNQTIRYHSERLAIA 682 C GR+GKLQ+A I +MPI PT VW LL C HGN ELA R+ EL + G VLLSNAYA AG+W+D A RK + Q +KK T S VE G ++ F AG++ E ++KL+E+ + ++AGY P+ + L V+ +EK + HSE+LA+A Sbjct: 412 CMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALA 582 The following BLAST results are available for this feature:
BLAST of CF417607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417607 ID=CF417607; Name=CF417607; organism=Citrus sinensis; type=EST; length=683bpback to top |