CF417623
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417623 vs. ExPASy Swiss-Prot
Match: TPIS_PSYIN (Triosephosphate isomerase OS=Psychromonas ingrahamii (strain 37) GN=tpiA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.154e-25 Identity = 61/108 (56.48%), Postives = 73/108 (67.59%), Query Frame = 3 Query: 33 SEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADA--IPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNSVSADVATKTRIIYGGSVNGSNCAELAKQ 350 + GL + CIGE L+ERE KTF+V QLKA D I + +N VIAYEPVWAIGTGKVA+ EQAQ+VHA +R WL S VA K +I+YGGSV S+ EL Q Sbjct: 118 ANGLVPVLCIGETLEERETDKTFNVVETQLKAVIDVSGIDALENAVIAYEPVWAIGTGKVASSEQAQDVHAHIRTWLAEQ-SKVVAAKVQILYGGSVKASSAKELFAQ 224 HSP 2 Score: 26.9498 bits (58), Expect = 1.154e-25 Identity = 13/21 (61.90%), Postives = 15/21 (71.43%), Query Frame = 1 Query: 355 DIDGFLVGGASLKGPEFATIV 417 DIDG LVGGA+L EF I+ Sbjct: 226 DIDGGLVGGAALLVEEFVGII 246
BLAST of CF417623 vs. ExPASy Swiss-Prot
Match: TPIS_CHLPD (Triosephosphate isomerase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=tpiA PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.155e-25 Identity = 57/112 (50.89%), Postives = 72/112 (64.29%), Query Frame = 3 Query: 6 IGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNSVSADVATKTRIIYGGSVNGSNCAEL 341 + +K +ALSEGL VI C GE L++RE G T DV Q++ I N+VIAYEPVWAIGTGK AT EQA+EVH +R+ + + + A + RI YGGSV SN EL Sbjct: 109 VNRKVKHALSEGLQVIMCAGETLEQREGGVTGDVVTAQVREGLLGIDDISNIVIAYEPVWAIGTGKTATSEQAEEVHLLIRNTVSDLFGEEAAGRLRIQYGGSVKPSNAKEL 220 HSP 2 Score: 28.1054 bits (61), Expect = 1.155e-25 Identity = 12/23 (52.17%), Postives = 16/23 (69.57%), Query Frame = 1 Query: 355 DIDGFLVGGASLKGPEFATIVNS 423 +IDG L+GGASL +F IV + Sbjct: 225 NIDGGLIGGASLNAADFVAIVKA 247
BLAST of CF417623 vs. ExPASy Swiss-Prot
Match: TPIS_HERAR (Triosephosphate isomerase OS=Herminiimonas arsenicoxydans GN=tpiA PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.503e-25 Identity = 58/114 (50.88%), Postives = 76/114 (66.67%), Query Frame = 3 Query: 6 IGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWD--NVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNSVSADVATKTRIIYGGSVNGSNCAEL 341 + +K ALS GL I C+GE L++REAG+T +V +Q+ A +I D +V+AYEPVWAIGTGK ATPE AQEVH LR L ++ +A AT+ RI+YGGS+ N EL Sbjct: 108 VAQKTVRALSAGLMPIVCVGETLEQREAGQTDEVVGRQIDAVLSSIAENDLAKIVVAYEPVWAIGTGKTATPEMAQEVHVMLRRRL-HAKNAQAATEVRILYGGSMKPDNAKEL 220 HSP 2 Score: 30.0314 bits (66), Expect = 1.503e-25 Identity = 12/23 (52.17%), Postives = 17/23 (73.91%), Query Frame = 1 Query: 355 DIDGFLVGGASLKGPEFATIVNS 423 DIDG L+GGA+LK +F I+ + Sbjct: 225 DIDGGLIGGAALKAADFLAIIRA 247
BLAST of CF417623 vs. ExPASy Swiss-Prot
Match: TPIS_THEP3 (Triosephosphate isomerase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=tpiA PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.503e-25 Identity = 56/114 (49.12%), Postives = 69/114 (60.53%), Query Frame = 3 Query: 6 IGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWD--NVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNSVSADVATKTRIIYGGSVNGSNCAEL 341 + KK ALS GL I C+GE L +RE GKTF+V Q K + D NVVIAYEP+WAIGTGK AT + A EV ALR+ + + + A+ RI YGGSV N +EL Sbjct: 108 VNKKVLSALSHGLSPIVCVGESLSQREEGKTFEVVLNQTKEALKGVSHDDIVNVVIAYEPIWAIGTGKTATAKDANEVIKALRNTIASLYGKEKASLVRIQYGGSVKPENISEL 221 HSP 2 Score: 34.2686 bits (77), Expect = 1.503e-25 Identity = 17/30 (56.67%), Postives = 20/30 (66.67%), Query Frame = 1 Query: 331 VLNLQNKRDIDGFLVGGASLKGPEFATIVN 420 + L + DIDG LVGGASL +FA IVN Sbjct: 218 ISELMAESDIDGALVGGASLVASDFAKIVN 247
BLAST of CF417623 vs. ExPASy Swiss-Prot
Match: TPIS_ERWT9 (Triosephosphate isomerase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=tpiA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.955e-25 Identity = 60/117 (51.28%), Postives = 70/117 (59.83%), Query Frame = 3 Query: 6 IGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADA--IPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNSVSADVATKTRIIYGGSVNGSNCAELAKQ 350 I KK A GL + CIGE E EAGKT +VC +Q+ A + ++ VVIAYEPVWAIGTGK ATP QAQ VH +RD + A VA + I YGGSVN N AEL Q Sbjct: 109 IAKKFAVLKQTGLIPVLCIGETEAENEAGKTEEVCARQIDAVLNTQGADAFKGVVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKK-DATVAAQVIIQYGGSVNDKNAAELFAQ 224 HSP 2 Score: 35.8094 bits (81), Expect = 1.955e-25 Identity = 18/30 (60.00%), Postives = 20/30 (66.67%), Query Frame = 1 Query: 355 DIDGFLVGGASLKGPEFATIVNSVTSKKVA 444 DIDG LVGGASLK FA IV + + K A Sbjct: 226 DIDGALVGGASLKADAFAAIVKAAAAAKKA 255
BLAST of CF417623 vs. ExPASy Swiss-Prot
Match: TPIS_FLAJ1 (Triosephosphate isomerase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=tpiA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 2.545e-25 Identity = 49/114 (42.98%), Postives = 74/114 (64.91%), Query Frame = 3 Query: 6 IGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLK--AYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNSVSADVATKTRIIYGGSVNGSNCAEL 341 I K AL + VI C GE+L++R++G F++ QL+ + A SW +V+AYEPVWAIGTG+ A+PEQAQE+H +R+ ++ + A++A + I+YGGSV N E+ Sbjct: 109 IANKVDTALKHDMTVIFCFGEELKDRQSGNHFNIVENQLRDGVFHIAKESWSKIVLAYEPVWAIGTGETASPEQAQEMHEFIRETIRKAFGAEIADEVSILYGGSVKPENAKEI 222 HSP 2 Score: 32.7278 bits (73), Expect = 2.545e-25 Identity = 13/27 (48.15%), Postives = 20/27 (74.07%), Query Frame = 1 Query: 346 NKRDIDGFLVGGASLKGPEFATIVNSV 426 +K D+DG L+GGA+LK +F IV ++ Sbjct: 224 SKPDVDGGLIGGAALKADDFLAIVTAI 250
BLAST of CF417623 vs. ExPASy Swiss-Prot
Match: TPIS_HAEDU (Triosephosphate isomerase OS=Haemophilus ducreyi GN=tpiA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.311e-25 Identity = 58/118 (49.15%), Postives = 74/118 (62.71%), Query Frame = 3 Query: 3 FIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADA--IPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNSVSADVATKTRIIYGGSVNGSNCAELAKQ 350 FI KK A + GL + CIGE E EAG+T VC +Q+ A ++ + +++ VIAYEP+WAIGTGK ATP QAQ VHA +R + A VA + I YGGSVN +N AEL Q Sbjct: 110 FIAKKFAALKTAGLTPVLCIGETEAENEAGQTQQVCARQIDAIINSLGVEAFNQAVIAYEPIWAIGTGKSATPAQAQAVHAFIRQHIAEKSQA-VADQLIIQYGGSVNDTNAAELFSQ 226 HSP 2 Score: 34.2686 bits (77), Expect = 3.311e-25 Identity = 18/33 (54.55%), Postives = 21/33 (63.64%), Query Frame = 1 Query: 340 LQNKRDIDGFLVGGASLKGPEFATIVNSVTSKK 438 L ++ DIDG LVGGASLK FA IV + K Sbjct: 223 LFSQPDIDGALVGGASLKATAFAEIVKAAEKAK 255
BLAST of CF417623 vs. ExPASy Swiss-Prot
Match: TPIS_GEOBB (Triosephosphate isomerase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=tpiA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 3.313e-25 Identity = 53/110 (48.18%), Postives = 66/110 (60.00%), Query Frame = 3 Query: 6 IGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNSVSADVATKTRIIYGGSVNGSN 329 + KK AL L I CIGE L+ REAG TF V +QLK + + + V++AYEPVWAIGTGKVA+ +QAQE HA +R + A K RI+YGGSV N Sbjct: 109 VNKKVKAALKGALVPIVCIGETLEAREAGDTFKVLERQLKGGLEGLTGTQFAPVIVAYEPVWAIGTGKVASDDQAQEAHAFIRGVIAGLFGKSAADKVRILYGGSVKPDN 218 HSP 2 Score: 38.5058 bits (88), Expect = 3.313e-25 Identity = 19/29 (65.52%), Postives = 22/29 (75.86%), Query Frame = 1 Query: 331 VLNLQNKRDIDGFLVGGASLKGPEFATIV 417 V L ++ DIDG LVGGASLKG FA+IV Sbjct: 219 VKGLMSRPDIDGALVGGASLKGASFASIV 247
BLAST of CF417623 vs. ExPASy Swiss-Prot
Match: TPIS_MAGSM (Triosephosphate isomerase OS=Magnetococcus sp. (strain MC-1) GN=tpiA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 4.311e-25 Identity = 56/119 (47.06%), Postives = 73/119 (61.34%), Query Frame = 3 Query: 6 IGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPS----WDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNSVSADVATKTRIIYGGSVNGSNCAELAKQ 350 + +K A A +GL I C+GE L++REA +T V QQL A +P+ +V+AYEPVWAIGTGKVA+ QAQE HA +R L + A+VA RI+YGGS+ N EL Q Sbjct: 110 VAQKVASAYRDGLTPILCVGETLEQREAEQTMQVLEQQLLACLPVLPADAAKQQQLVVAYEPVWAIGTGKVASTAQAQEAHAFIRGLLAKELGANVADAVRILYGGSMKPDNAKELLGQ 228 HSP 2 Score: 31.9574 bits (71), Expect = 4.311e-25 Identity = 13/31 (41.94%), Postives = 22/31 (70.97%), Query Frame = 1 Query: 340 LQNKRDIDGFLVGGASLKGPEFATIVNSVTS 432 L + D+DG L+GGA+LK +F I++ +T+ Sbjct: 225 LLGQADVDGGLIGGAALKANDFLAIMDGLTA 255
BLAST of CF417623 vs. ExPASy Swiss-Prot
Match: TPIS_PELCD (Triosephosphate isomerase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=tpiA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.312e-25 Identity = 53/118 (44.92%), Postives = 74/118 (62.71%), Query Frame = 3 Query: 3 FIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNSVSADVATKTRIIYGGSVNGSNCAELAKQ 350 FI +K + GL I CIGE L+EREA KTFDV +Q++ + + + + +V+AYEPVWAIGTGK AT QAQ+ H+ +R + + + VA + RI+YGGSV N L +Q Sbjct: 108 FINRKVKAVIDAGLSAILCIGETLEEREADKTFDVLERQVRCGLEGLDAAAMEQIVVAYEPVWAIGTGKTATDSQAQQAHSFIRSLVNDIFGSKVAQQVRIVYGGSVKPGNVDGLLQQ 225 HSP 2 Score: 30.0314 bits (66), Expect = 4.312e-25 Identity = 15/26 (57.69%), Postives = 17/26 (65.38%), Query Frame = 1 Query: 340 LQNKRDIDGFLVGGASLKGPEFATIV 417 L + DIDG LVGGASL +F IV Sbjct: 222 LLQQPDIDGALVGGASLNAEDFIRIV 247 The following BLAST results are available for this feature:
BLAST of CF417623 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417623 ID=CF417623; Name=CF417623; organism=Citrus sinensis; type=EST; length=665bpback to top |