CF417623
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417623 vs. ExPASy Swiss-Prot
Match: TPIC_SPIOL (Triosephosphate isomerase, chloroplastic OS=Spinacia oleracea GN=TPIP1 PE=1 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 1.120e-54 Identity = 102/132 (77.27%), Postives = 117/132 (88.64%), Query Frame = 3 Query: 3 FIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNSVSADVATKTRIIYGGSVNGSNCAELAKQEGY*WFSGWWCFLEGP 398 FIGKKAAYAL++G+GVIACIGE L+EREAGKTFDVC+QQLKA+ADA+PSWDNVV+AYEPVWAIGTGKVA+P+QAQEVH A+RDWLK +VS +VA+KTRIIYGGSVNG NCAELAKQE F L+GP Sbjct: 175 FIGKKAAYALNQGVGVIACIGELLEEREAGKTFDVCYQQLKAFADALPSWDNVVVAYEPVWAIGTGKVASPDQAQEVHVAVRDWLKKNVSEEVASKTRIIYGGSVNGGNCAELAKQEDIDGFLVGGASLKGP 306
BLAST of CF417623 vs. ExPASy Swiss-Prot
Match: TPIC_FRAAN (Triosephosphate isomerase, chloroplastic OS=Fragaria ananassa GN=TPI PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.618e-53 Identity = 99/132 (75.00%), Postives = 118/132 (89.39%), Query Frame = 3 Query: 3 FIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNSVSADVATKTRIIYGGSVNGSNCAELAKQEGY*WFSGWWCFLEGP 398 FIGKKAAYAL+EGLGVIACIGE+L+EREAGKTFDVC++QLKA+ADA+PSW+N+V+AYEPVWAIGTGKVA+P+QAQEVH A+R+WLK +VSA+VA+KTRIIYGGSVNG N AELAK+E F L+GP Sbjct: 167 FIGKKAAYALNEGLGVIACIGEKLEEREAGKTFDVCYEQLKAFADAVPSWENIVVAYEPVWAIGTGKVASPQQAQEVHVAVREWLKKNVSAEVASKTRIIYGGSVNGGNSAELAKEEDIDGFLVGGASLKGP 298
BLAST of CF417623 vs. ExPASy Swiss-Prot
Match: TPIC_ARATH (Triosephosphate isomerase, chloroplastic OS=Arabidopsis thaliana GN=TIM PE=1 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.113e-53 Identity = 101/132 (76.52%), Postives = 115/132 (87.12%), Query Frame = 3 Query: 3 FIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNSVSADVATKTRIIYGGSVNGSNCAELAKQEGY*WFSGWWCFLEGP 398 FIGKKAAYALSEGLGVIACIGE+L+EREAGKTFDVCF QLKA+ADA+PSWDN+V+AYEPVWAIGTGKVA+P+QAQEVH A+R WLK +VS +VA+KTRIIYGGSVNG N AELAK+E F L+GP Sbjct: 168 FIGKKAAYALSEGLGVIACIGEKLEEREAGKTFDVCFAQLKAFADAVPSWDNIVVAYEPVWAIGTGKVASPQQAQEVHVAVRGWLKKNVSEEVASKTRIIYGGSVNGGNSAELAKEEDIDGFLVGGASLKGP 299
BLAST of CF417623 vs. ExPASy Swiss-Prot
Match: TPIC_SECCE (Triosephosphate isomerase, chloroplastic OS=Secale cereale PE=1 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.729e-50 Identity = 99/138 (71.74%), Postives = 112/138 (81.16%), Query Frame = 3 Query: 3 FIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNSVSADVATKTRIIYGGSVNGSNCAELAKQEGY*WFSGWWCFLEGPRVCHHC 416 FIGKKAAYALS+ L V+ACIGE L+EREAGKTFDVCF+Q+KA+AD I W NVVIAYEPVWAIGTGKVA+PEQAQEVHAA+RDWLK +VSADVA+ RIIYGGSVN +NCAELAK+E F L+GP C Sbjct: 151 FIGKKAAYALSQNLKVMACIGELLEEREAGKTFDVCFKQMKAFADNITDWTNVVIAYEPVWAIGTGKVASPEQAQEVHAAVRDWLKTNVSADVASTVRIIYGGSVNAANCAELAKKEDIDGFLVGGASLKGPDFATIC 288
BLAST of CF417623 vs. ExPASy Swiss-Prot
Match: TPIS_STELP (Triosephosphate isomerase, cytosolic OS=Stellaria longipes GN=TPI PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 6.583e-47 Identity = 95/133 (71.43%), Postives = 107/133 (80.45%), Query Frame = 3 Query: 3 FIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYAD-AIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNSVSADVATKTRIIYGGSVNGSNCAELAKQEGY*WFSGWWCFLEGP 398 F+GKKAAYA SEGLGVIACIGE L+EREAGKTFDVCF+QLK++A WDNVV+AYEPVWAIGTGKVA+PEQAQEVH A+RDWLK +VS +VA+KTRIIYGGSVNG N LA QE F L+GP Sbjct: 109 FVGKKAAYAQSEGLGVIACIGELLEEREAGKTFDVCFKQLKSFARFPAKPWDNVVVAYEPVWAIGTGKVASPEQAQEVHVAVRDWLKTNVSEEVASKTRIIYGGSVNGGNSLALAAQEDVDGFLVGGASLKGP 241
BLAST of CF417623 vs. ExPASy Swiss-Prot
Match: TPIS_MAIZE (Triosephosphate isomerase, cytosolic OS=Zea mays PE=3 SV=3) HSP 1 Score: 166.777 bits (421), Expect = 4.246e-46 Identity = 80/116 (68.97%), Postives = 91/116 (78.45%), Query Frame = 3 Query: 3 FIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNSVSADVATKTRIIYGGSVNGSNCAELAKQ 350 F+G K AYALS+GL VIAC+GE L++REAG T DV Q KA A+ I W NVV+AYEPVWAIGTGKVATP QAQEVHA+LRDWLK + S +VA TRIIYGGSV +NC ELA Q Sbjct: 109 FVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIAEKIKDWSNVVVAYEPVWAIGTGKVATPAQAQEVHASLRDWLKTNASPEVAESTRIIYGGSVTAANCKELAAQ 224 HSP 2 Score: 39.2762 bits (90), Expect = 4.246e-46 Identity = 19/27 (70.37%), Postives = 22/27 (81.48%), Query Frame = 1 Query: 355 DIDGFLVGGASLKGPEFATIVNSVTSK 435 D+DGFLVGGASLK PEF I+N+ T K Sbjct: 226 DVDGFLVGGASLK-PEFIDIINAATVK 251
BLAST of CF417623 vs. ExPASy Swiss-Prot
Match: TPIS_SECCE (Triosephosphate isomerase, cytosolic OS=Secale cereale PE=2 SV=3) HSP 1 Score: 166.392 bits (420), Expect = 5.534e-46 Identity = 79/116 (68.10%), Postives = 94/116 (81.03%), Query Frame = 3 Query: 3 FIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNSVSADVATKTRIIYGGSVNGSNCAELAKQ 350 F+G+K AYAL++GL VIAC+GE L++REAG T +V +Q KA AD I W NVV+AYEPVWAIGTGKVA+P QAQEVHA LRDWLK +VS +VA TRIIYGGSV G++C ELA Q Sbjct: 109 FVGEKVAYALAQGLKVIACVGETLEQREAGSTMEVVAEQTKAIADKIKDWTNVVVAYEPVWAIGTGKVASPAQAQEVHANLRDWLKTNVSPEVAESTRIIYGGSVTGASCKELAAQ 224 HSP 2 Score: 39.2762 bits (90), Expect = 5.534e-46 Identity = 19/27 (70.37%), Postives = 22/27 (81.48%), Query Frame = 1 Query: 355 DIDGFLVGGASLKGPEFATIVNSVTSK 435 D+DGFLVGGASLK PEF I+N+ T K Sbjct: 226 DVDGFLVGGASLK-PEFIDIINAATVK 251
BLAST of CF417623 vs. ExPASy Swiss-Prot
Match: TPIS_ARATH (Triosephosphate isomerase, cytosolic OS=Arabidopsis thaliana GN=CTIMC PE=1 SV=2) HSP 1 Score: 166.392 bits (420), Expect = 1.225e-45 Identity = 81/116 (69.83%), Postives = 90/116 (77.59%), Query Frame = 3 Query: 3 FIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNSVSADVATKTRIIYGGSVNGSNCAELAKQ 350 F+G K AYAL++GL VIAC+GE L+EREAG T DV Q KA AD + +W NVVIAYEPVWAIGTGKVA+P QAQEVH LR WL +VSADVA TRIIYGGSVNG NC EL Q Sbjct: 109 FVGDKVAYALAQGLKVIACVGETLEEREAGSTMDVVAAQTKAIADRVTNWSNVVIAYEPVWAIGTGKVASPAQAQEVHDELRKWLAKNVSADVAATTRIIYGGSVNGGNCKELGGQ 224 HSP 2 Score: 38.1206 bits (87), Expect = 1.225e-45 Identity = 20/35 (57.14%), Postives = 24/35 (68.57%), Query Frame = 1 Query: 340 LQNKRDIDGFLVGGASLKGPEFATIVNSVTSKKVA 444 L + D+DGFLVGGASLK PEF I+ + KK A Sbjct: 221 LGGQADVDGFLVGGASLK-PEFIDIIKAAEVKKSA 254
BLAST of CF417623 vs. ExPASy Swiss-Prot
Match: TPIS_LACSA (Triosephosphate isomerase, cytosolic (Fragment) OS=Lactuca sativa PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.090e-45 Identity = 80/116 (68.97%), Postives = 93/116 (80.17%), Query Frame = 3 Query: 3 FIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNSVSADVATKTRIIYGGSVNGSNCAELAKQ 350 F+G K AYALS+GL VIAC+GE L++REAG T +V Q KA AD I SWDNVV+AYEPVWAIGTGKVA+P QAQEVHA LR W ++VSA+V+ TRIIYGGSV+GSNC EL Q Sbjct: 50 FVGDKVAYALSQGLKVIACVGETLEQREAGTTMEVVAAQTKAIADKISSWDNVVLAYEPVWAIGTGKVASPAQAQEVHAGLRKWFCDNVSAEVSASTRIIYGGSVSGSNCKELGGQ 165 HSP 2 Score: 38.1206 bits (87), Expect = 2.090e-45 Identity = 20/35 (57.14%), Postives = 24/35 (68.57%), Query Frame = 1 Query: 340 LQNKRDIDGFLVGGASLKGPEFATIVNSVTSKKVA 444 L + D+DGFLVGGASLK PEF I+ + KK A Sbjct: 162 LGGQTDVDGFLVGGASLK-PEFIDIIKAAEVKKSA 195
BLAST of CF417623 vs. ExPASy Swiss-Prot
Match: TPIS_ORYSJ (Triosephosphate isomerase, cytosolic OS=Oryza sativa subsp. japonica GN=TPI PE=1 SV=3) HSP 1 Score: 160.999 bits (406), Expect = 3.534e-45 Identity = 77/114 (67.54%), Postives = 90/114 (78.95%), Query Frame = 3 Query: 3 FIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNSVSADVATKTRIIYGGSVNGSNCAELA 344 F+G K AYALS+GL VIAC+GE L++RE+G T DV Q KA ++ I W NVV+AYEPVWAIGTGKVATP+QAQEVH LR WL +VSA+VA TRIIYGGSV G+NC ELA Sbjct: 109 FVGDKVAYALSQGLKVIACVGETLEQRESGSTMDVVAAQTKAISERIKDWTNVVVAYEPVWAIGTGKVATPDQAQEVHDGLRKWLAANVSAEVAESTRIIYGGSVTGANCKELA 222 HSP 2 Score: 41.9726 bits (97), Expect = 3.534e-45 Identity = 22/32 (68.75%), Postives = 24/32 (75.00%), Query Frame = 1 Query: 340 LQNKRDIDGFLVGGASLKGPEFATIVNSVTSK 435 L K D+DGFLVGGASLK PEF I+NS T K Sbjct: 221 LAAKPDVDGFLVGGASLK-PEFIDIINSATVK 251 The following BLAST results are available for this feature:
BLAST of CF417623 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417623 ID=CF417623; Name=CF417623; organism=Citrus sinensis; type=EST; length=665bpback to top |