CF417623

Overview
NameCF417623
Unique NameCF417623
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length665
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417623 vs. ExPASy Swiss-Prot
Match: TPIS_ASPOR (Triosephosphate isomerase OS=Aspergillus oryzae GN=tpiA PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.473e-36
Identity = 68/118 (57.63%), Postives = 85/118 (72.03%), Query Frame = 3
Query:    3 FIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNSVSADVATKTRIIYGGSVNGSNCAELAKQ 350
            FI +K   A+  G+ VI CIGE L+EREA KT +V  +QL A A  +    W  VVIAYEPVWAIGTGKVAT +QAQEVHAA+R WL +++S + +  TRIIYGGSV+  NC ELA++
Sbjct:  109 FIARKVKAAIDGGISVIFCIGETLEEREADKTIEVVTKQLNAAAKELTKEQWSKVVIAYEPVWAIGTGKVATTQQAQEVHAAIRKWLADAISPEASENTRIIYGGSVSEKNCRELAQE 226          

HSP 2 Score: 37.7354 bits (86), Expect = 1.473e-36
Identity = 18/28 (64.29%), Postives = 22/28 (78.57%), Query Frame = 1
Query:  340 LQNKRDIDGFLVGGASLKGPEFATIVNS 423
            L  +RD+DGFLVGGASLK P F  I+N+
Sbjct:  223 LAQERDVDGFLVGGASLK-PAFVDIINA 249          
BLAST of CF417623 vs. ExPASy Swiss-Prot
Match: TPIS_ENTHI (Triosephosphate isomerase OS=Entamoeba histolytica GN=TPI PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 4.240e-36
Identity = 64/117 (54.70%), Postives = 83/117 (70.94%), Query Frame = 3
Query:    6 IGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIP--SWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNSVSADVATKTRIIYGGSVNGSNCAELAKQ 350
            + +K   A+  GL VIACIGE   +R A +T +V   QLKA  +AI   +W N+++AYEPVWAIGTGK ATP+QAQEVH  +R W+  ++S +VA  TRI YGGSVN +NC ELAK+
Sbjct:  116 VAEKVKVAIDAGLKVIACIGETEAQRIANQTEEVVAAQLKAINNAISKEAWKNIILAYEPVWAIGTGKTATPDQAQEVHQYIRKWMTENISKEVAEATRIQYGGSVNPANCNELAKK 232          

HSP 2 Score: 44.2838 bits (103), Expect = 4.240e-36
Identity = 21/32 (65.62%), Postives = 24/32 (75.00%), Query Frame = 1
Query:  340 LQNKRDIDGFLVGGASLKGPEFATIVNSVTSK 435
            L  K DIDGFLVGGASL   +F TI+NSV+ K
Sbjct:  229 LAKKADIDGFLVGGASLDAAKFKTIINSVSEK 260          
BLAST of CF417623 vs. ExPASy Swiss-Prot
Match: TPIS_YEAST (Triosephosphate isomerase OS=Saccharomyces cerevisiae GN=TPI1 PE=1 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 5.528e-36
Identity = 60/109 (55.05%), Postives = 80/109 (73.39%), Query Frame = 3
Query:    3 FIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNSVSADVATKTRIIYGGSVNGSN 329
            FI  K  +AL +G+GVI CIGE L+E++AGKT DV  +QL A  + +  W NVV+AYEPVWAIGTG  ATPE AQ++HA++R +L + +    A++ RI+YGGS NGSN
Sbjct:  108 FIADKTKFALGQGVGVILCIGETLEEKKAGKTLDVVERQLNAVLEEVKDWTNVVVAYEPVWAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSANGSN 216          

HSP 2 Score: 40.4318 bits (93), Expect = 5.528e-36
Identity = 19/30 (63.33%), Postives = 24/30 (80.00%), Query Frame = 1
Query:  334 LNLQNKRDIDGFLVGGASLKGPEFATIVNS 423
            +  ++K D+DGFLVGGASLK PEF  I+NS
Sbjct:  218 VTFKDKADVDGFLVGGASLK-PEFVDIINS 246          
BLAST of CF417623 vs. ExPASy Swiss-Prot
Match: TPIS_DICDI (Triosephosphate isomerase OS=Dictyostelium discoideum GN=tpiA PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.591e-35
Identity = 63/116 (54.31%), Postives = 79/116 (68.10%), Query Frame = 3
Query:    6 IGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPS-WDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNSVSADVATKTRIIYGGSVNGSNCAELAKQ 350
            I KK  YA+S GL VI C+GE L +R++  T  +  +QLK +A   P  W  +VIAYEPVWAIGTG VATP++AQ+ H  +R W+   VS DVA KT I+YGGSVN  NC  L+KQ
Sbjct:  112 ITKKTKYAISLGLTVILCLGELLADRKSNNTEHILSEQLKDFASFTPEEWSKIVIAYEPVWAIGTGAVATPQEAQDTHVFIRKWISEKVSEDVAKKTSIMYGGSVNADNCHNLSKQ 227          

HSP 2 Score: 40.817 bits (94), Expect = 1.591e-35
Identity = 19/34 (55.88%), Postives = 22/34 (64.71%), Query Frame = 1
Query:  337 NLQNKRDIDGFLVGGASLKGPEFATIVNSVTSKK 438
            NL  + DIDGFLVGGASL   +F  I+ S   KK
Sbjct:  223 NLSKQSDIDGFLVGGASLVASDFIAIIKSAVPKK 256          
BLAST of CF417623 vs. ExPASy Swiss-Prot
Match: TPIS_ZYGBA (Triosephosphate isomerase OS=Zygosaccharomyces bailii GN=TPI1 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.701e-35
Identity = 60/108 (55.56%), Postives = 78/108 (72.22%), Query Frame = 3
Query:    6 IGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNSVSADVATKTRIIYGGSVNGSN 329
            I +K A+ALS+G+GVI CIGE L +++AG T  V  +QL+A  D +  W NVVIAYEPVWAIGTG  ATPE AQE+H ++R++L   +    A +TRI+YGGS NG N
Sbjct:  109 IAEKTAFALSQGVGVILCIGETLDQKKAGTTLQVVERQLQAVIDKVKDWSNVVIAYEPVWAIGTGLAATPEDAQEIHHSIREFLAKKLGEKTAQETRILYGGSANGKN 216          

HSP 2 Score: 40.0466 bits (92), Expect = 2.701e-35
Identity = 19/30 (63.33%), Postives = 24/30 (80.00%), Query Frame = 1
Query:  334 LNLQNKRDIDGFLVGGASLKGPEFATIVNS 423
            +  ++K D+DGFLVGGASLK PEF  I+NS
Sbjct:  218 VTFKDKPDVDGFLVGGASLK-PEFVDIINS 246          
BLAST of CF417623 vs. ExPASy Swiss-Prot
Match: TPIS_CANAL (Triosephosphate isomerase OS=Candida albicans GN=TPI1 PE=1 SV=3)

HSP 1 Score: 131.724 bits (330), Expect = 1.013e-34
Identity = 61/112 (54.46%), Postives = 77/112 (68.75%), Query Frame = 3
Query:    3 FIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNSVSADVATKTRIIYGGSVNGSNCAE 338
            FI +K  +AL  G+ VI CIGE L+ER+ G T DVC +QL A +  +  W N+V+AYEPVWAIGTG  ATPE A+E H  +R  L  S+ A+ A KTRI+YGGSVNG N  +
Sbjct:  108 FIAEKTKFALDTGVKVILCIGETLEERKGGVTLDVCARQLDAVSKIVSDWSNIVVAYEPVWAIGTGLAATPEDAEETHKGIRAHLAKSIGAEQAEKTRILYGGSVNGKNAKD 219          

HSP 2 Score: 36.1946 bits (82), Expect = 1.013e-34
Identity = 17/29 (58.62%), Postives = 23/29 (79.31%), Query Frame = 1
Query:  337 NLQNKRDIDGFLVGGASLKGPEFATIVNS 423
            + ++K ++DGFLVGGASLK PEF  I+ S
Sbjct:  219 DFKDKANVDGFLVGGASLK-PEFVDIIKS 246          
BLAST of CF417623 vs. ExPASy Swiss-Prot
Match: TPIS_TRYBB (Triosephosphate isomerase, glycosomal OS=Trypanosoma brucei brucei PE=1 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 1.718e-34
Identity = 66/117 (56.41%), Postives = 81/117 (69.23%), Query Frame = 3
Query:    6 IGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNSVSADVATKTRIIYGGSVNGSNCAELAKQ 350
            +  K A A++ G  VIACIGE LQERE+G+T  V   Q+ A A  +    W  VVIAYEPVWAIGTGKVATP+QAQE HA +R W+ + + ADVA + RI+YGGSVNG N   L +Q
Sbjct:  109 VADKVAAAVASGFMVIACIGETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAHALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQ 225          

HSP 2 Score: 35.8094 bits (81), Expect = 1.718e-34
Identity = 17/28 (60.71%), Postives = 22/28 (78.57%), Query Frame = 1
Query:  340 LQNKRDIDGFLVGGASLKGPEFATIVNS 423
            L  +RD++GFLVGGASLK PEF  I+ +
Sbjct:  222 LYQQRDVNGFLVGGASLK-PEFVDIIKA 248          
BLAST of CF417623 vs. ExPASy Swiss-Prot
Match: TPIS_COPC7 (Triosephosphate isomerase OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=TPI PE=3 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 1.718e-34
Identity = 65/118 (55.08%), Postives = 80/118 (67.80%), Query Frame = 3
Query:    6 IGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNSVSADVATKTRIIYGGSVNGSNCAELAKQE 353
            +  K   AL  GL VI CIGE L+ERE G+T  VC +QL A    +    W N+VIAYEPVWAIGTGKVAT  QAQE H  +R +L  +VS  VA++TR+IYGGSVN +N  +LA Q+
Sbjct:  109 VALKTRAALDNGLKVILCIGETLKEREEGRTAAVCEEQLSAVVKQLKEEDWSNIVIAYEPVWAIGTGKVATTSQAQETHVDVRKYLATAVSPKVASETRVIYGGSVNAANSKDLASQQ 226          

HSP 2 Score: 39.6614 bits (91), Expect = 1.718e-34
Identity = 19/29 (65.52%), Postives = 25/29 (86.21%), Query Frame = 1
Query:  337 NLQNKRDIDGFLVGGASLKGPEFATIVNS 423
            +L +++DIDGFLVGGASLK PEF  I+N+
Sbjct:  221 DLASQQDIDGFLVGGASLK-PEFVDIINA 248          
BLAST of CF417623 vs. ExPASy Swiss-Prot
Match: TPIS_ASHGO (Triosephosphate isomerase OS=Ashbya gossypii GN=TPI1 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.718e-34
Identity = 60/110 (54.55%), Postives = 76/110 (69.09%), Query Frame = 3
Query:    6 IGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNSVSADVATKTRIIYGGSVNGSNCA 335
            + +K A+AL  G+ VI CIGE L E++AG T DV  +QL    + +  W NVVIAYEPVWAIGTG  AT E AQ++HAA+RD+L    S DVA   RI++GGS NG+N A
Sbjct:  109 VAEKTAFALERGVSVILCIGETLDEKKAGVTLDVVKRQLTPVLEKVKDWTNVVIAYEPVWAIGTGLAATAEDAQDIHAAIRDFLAERTSRDVADAVRILFGGSANGANAA 218          

HSP 2 Score: 40.4318 bits (93), Expect = 1.718e-34
Identity = 19/29 (65.52%), Postives = 24/29 (82.76%), Query Frame = 1
Query:  337 NLQNKRDIDGFLVGGASLKGPEFATIVNS 423
            + ++K D+DGFLVGGASLK PEF  I+NS
Sbjct:  219 SFRDKADVDGFLVGGASLK-PEFVDIINS 246          
BLAST of CF417623 vs. ExPASy Swiss-Prot
Match: TPIS_CANGA (Triosephosphate isomerase OS=Candida glabrata GN=TPI1 PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.423e-33
Identity = 58/108 (53.70%), Postives = 75/108 (69.44%), Query Frame = 3
Query:    6 IGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNSVSADVATKTRIIYGGSVNGSN 329
            + +K  +AL +GLGVI CIGE L+E++AG T  V  +QL A    +  W NVVIAYEPVWAIGTG  AT E AQ++H ++R +L   +  D A KTRI+YGGS NG+N
Sbjct:  109 VAEKTKFALDQGLGVILCIGETLEEKKAGVTLKVVERQLDAVIAEVKDWTNVVIAYEPVWAIGTGLAATAEDAQDIHHSIRSYLAEKLGKDTAEKTRILYGGSANGAN 216          

HSP 2 Score: 40.0466 bits (92), Expect = 1.423e-33
Identity = 19/27 (70.37%), Postives = 23/27 (85.19%), Query Frame = 1
Query:  343 QNKRDIDGFLVGGASLKGPEFATIVNS 423
            ++K D+DGFLVGGASLK PEF  I+NS
Sbjct:  221 KDKADVDGFLVGGASLK-PEFVDIINS 246          
The following BLAST results are available for this feature:
BLAST of CF417623 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_ASPOR1.473e-3657.63Triosephosphate isomerase OS=Aspergillus oryzae GN... [more]
TPIS_ENTHI4.240e-3654.70Triosephosphate isomerase OS=Entamoeba histolytica... [more]
TPIS_YEAST5.528e-3655.05Triosephosphate isomerase OS=Saccharomyces cerevis... [more]
TPIS_DICDI1.591e-3554.31Triosephosphate isomerase OS=Dictyostelium discoid... [more]
TPIS_ZYGBA2.701e-3555.56Triosephosphate isomerase OS=Zygosaccharomyces bai... [more]
TPIS_CANAL1.013e-3454.46Triosephosphate isomerase OS=Candida albicans GN=T... [more]
TPIS_TRYBB1.718e-3456.41Triosephosphate isomerase, glycosomal OS=Trypanoso... [more]
TPIS_COPC71.718e-3455.08Triosephosphate isomerase OS=Coprinopsis cinerea (... [more]
TPIS_ASHGO1.718e-3454.55Triosephosphate isomerase OS=Ashbya gossypii GN=TP... [more]
TPIS_CANGA1.423e-3353.70Triosephosphate isomerase OS=Candida glabrata GN=T... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-553 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-007_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417623 ID=CF417623; Name=CF417623; organism=Citrus sinensis; type=EST; length=665bp
AGTTTATAGGGAAGAAAGCTGCCTATGCCTTGAGCGAGGGACTTGGTGTC
ATAGCTTGTATCGGGGAACAGTTGCAAGAAAGAGAAGCAGGGAAAACTTT
TGATGTCTGTTTTCAGCAACTTAAAGCCTATGCAGATGCTATACCCAGTT
GGGATAATGTAGTCATTGCATATGAGCCCGTTTGGGCTATTGGAACTGGT
AAAGTGGCCACCCCTGAGCAGGCTCAGGAAGTACATGCTGCTCTTCGTGA
TTGGCTTAAAAACAGTGTCTCAGCAGACGTTGCCACTAAAACACGTATTA
TCTATGGAGGGTCAGTAAATGGAAGCAATTGTGCTGAACTTGCAAAACAA
GAGGGATATTGATGGTTTTCTGGTTGGTGGTGCTTCCTTGAAGGGCCCAG
AGTTTGCCACCATTGTCAATTCCGTAACATCCAAGAAAGTAGCTGCGTGA
TGTATAAACCTGTTTTGTCAAGATCAACCAATAATGGGCTAAGAGAATCT
ATATCAGTTTAAAGCTAATTATCGTAACCAGCCTATGCCCTTGCTATGTT
CAACGAAGTTTTGATAGTTTATTTATTTGTTTCTCCTTCCCCNAACAATC
GGAGGTTCCTTCTGTTTCTCTATTGTGGGCTGAACTTGTTTGATACCGGA
CAGGAGAACAATATA
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