CF503982
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503982 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.904e-14 Identity = 33/64 (51.56%), Postives = 46/64 (71.88%), Query Frame = 3 Query: 144 SREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQLAMKLLG 335 + MFE +LP RN+ CP +GFYTYDA+ A + +PGFG +G++ RKRE+AAFFAQ + + G Sbjct: 68 TESMFEQMLPNRNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSG 131
BLAST of CF503982 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.612e-13 Identity = 39/78 (50.00%), Postives = 50/78 (64.10%), Query Frame = 3 Query: 129 LGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQLAMKLLG------DGP 344 +G II+R MFE +L +R D C FYTYDAFI+AA FP FG +GN+ R+RE+AAFF Q + + G DGP Sbjct: 27 VGSIITRAMFESMLSHRGDQGCQG-AFYTYDAFIKAAGDFPRFGTTGNDETRRRELAAFFGQTSHETTGGWATAPDGP 103
BLAST of CF503982 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.125e-13 Identity = 35/78 (44.87%), Postives = 49/78 (62.82%), Query Frame = 3 Query: 129 LGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQLAMKLLG------DGP 344 + +IS+ +FE +L +RND C A+GFYTY+AFI A + F FG +G+ R +EIAAF AQ + + G DGP Sbjct: 5 ISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFAAFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGP 82
BLAST of CF503982 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.125e-13 Identity = 35/86 (40.70%), Postives = 51/86 (59.30%), Query Frame = 3 Query: 105 GHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQLAMKLLG------DGP 344 G+ + I+S +++ L +++DA CPARGFYTY +F+ AA FP F +G RKRE+AAF AQ++ + G DGP Sbjct: 41 GYSPSPSPVSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGP 126 The following BLAST results are available for this feature:
BLAST of CF503982 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503982 ID=CF503982; Name=CF503982; organism=Citrus sinensis; type=EST; length=390bpback to top |