CF503982
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503982 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.111e-21 Identity = 49/99 (49.49%), Postives = 65/99 (65.66%), Query Frame = 3 Query: 69 CGSGV-VCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQLAMKLLG------DGP 344 CG+ CG + G++G++I+R MF D+L +RN+ CP +GFYTYDAFI AA+AFPGFG +G+ T RKREIAAF AQ + + G DGP Sbjct: 44 CGNTADYCGSGCQSQCSSTGDIGQLITRSMFNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFPGFGTTGDTTTRKREIAAFLAQTSHETTGGWASAPDGP 142
BLAST of CF503982 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 8.824e-20 Identity = 47/85 (55.29%), Postives = 57/85 (67.06%), Query Frame = 3 Query: 90 GERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQLAMKLLGDGP 344 G D G D G L II + F+ LL +RNDARCPA GFYTY+AFI AA+ FP FGN+G++ MRKREIAAF Q + + G P Sbjct: 76 GGDDGGGDGDDGYLSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWP 160
BLAST of CF503982 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.824e-20 Identity = 52/100 (52.00%), Postives = 65/100 (65.00%), Query Frame = 3 Query: 69 CGSGVVCGERDTGHGTD--GGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQLAMKLLG------DGP 344 CG G C + G T GG+LG IIS MF+ +L +RND C +GFY+Y+AFI AA++FPGFG SG+ T RKREIAAFFAQ + + G DGP Sbjct: 54 CGPGN-CQSQCPGGPTPPGGGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGP 152
BLAST of CF503982 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.824e-20 Identity = 46/80 (57.50%), Postives = 57/80 (71.25%), Query Frame = 3 Query: 123 GELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQLAMKLLG------DGP 344 G+L IISR F+D+L +RND CPARGFYTYDAFI AA++FPGFG +G+ RK+EIAAFF Q + + G DGP Sbjct: 69 GDLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGP 148
BLAST of CF503982 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 1.505e-19 Identity = 46/81 (56.79%), Postives = 58/81 (71.60%), Query Frame = 3 Query: 120 GGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQLAMKLLG------DGP 344 GG+LG IIS MF+ +L +RND C +GFY+Y+AFI AA++FPGFG SG+ T RKREIAAFFAQ + + G DGP Sbjct: 77 GGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGP 157
BLAST of CF503982 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.966e-19 Identity = 46/93 (49.46%), Postives = 61/93 (65.59%), Query Frame = 3 Query: 87 CGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQLAMKLLG-------DGP 344 C + +G G D G L +I+RE F+ +L +RND CPARGFYTYDAFI AA++FP F +G++ RKRE+AAF AQ + + G DGP Sbjct: 58 CQSQCSGSGGDTGGLDSLITRERFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFPAFATTGDDATRKREVAAFLAQTSHETTGGAGWAAPDGP 150
BLAST of CF503982 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.567e-19 Identity = 42/75 (56.00%), Postives = 56/75 (74.67%), Query Frame = 3 Query: 111 GTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQLAMKLLG 335 GT G I++RE+FE +L +RN+ CPA+GFYTYDAFI AA +FPGFG +G++T RK+EIAAFF Q + + G Sbjct: 21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETKG 95
BLAST of CF503982 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.353e-19 Identity = 42/75 (56.00%), Postives = 56/75 (74.67%), Query Frame = 3 Query: 111 GTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQLAMKLLG 335 GT G I++RE+FE +L +RN+ CPA+GFYTYDAFI AA +FPGFG +G++T RK+EIAAFF Q + + G Sbjct: 21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNG 95
BLAST of CF503982 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.379e-19 Identity = 43/83 (51.81%), Postives = 60/83 (72.29%), Query Frame = 3 Query: 111 GTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQLAMKLLG-----DGP 344 G+ ++G I++ ++F ++L RND RCPA+GFYTYDAFI AA +FPGFG +G++T RK+EIAAFF Q + + G DGP Sbjct: 13 GSFAQDVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSADGP 95
BLAST of CF503982 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 4.379e-19 Identity = 48/91 (52.75%), Postives = 58/91 (63.74%), Query Frame = 3 Query: 72 GSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQLAMKLLGDGP 344 G G G G G G L II MF+D+L YRND +CPA GFYTY+AFI AA+ FP FGN+G++ MRKREIAAF Q + + G P Sbjct: 66 GGGGGGGGGGGGGGGGDGYLSDIIPESMFDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETNGWWP 156 The following BLAST results are available for this feature:
BLAST of CF503982 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CF503982 ID=CF503982; Name=CF503982; organism=Citrus sinensis; type=EST; length=390bpback to top |