CF504011

Overview
NameCF504011
Unique NameCF504011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length568
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PPR15_ARATH (Pentatricopeptide repeat-containing protein At1g06145 OS=Arabidopsis thaliana GN=EMB1444 PE=2 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 3.384e-40
Identity = 74/185 (40.00%), Postives = 122/185 (65.95%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHY 555
            +F++M  +D++SWTT++  +SQ   + EA+A+F +M EE   P++ T+S+V+ +CA L  L+ G++VH    + G   D  I SAL+DMY+KCG++  A+++F  +   +   W +II G A HG ++ AL++F +ME   VKPN+VTF+ V  AC+H GLV+EG   ++ M + + +V  +EHY
Sbjct:  243 LFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHY 427          

HSP 2 Score: 78.1814 bits (191), Expect = 3.190e-14
Identity = 48/179 (26.82%), Postives = 85/179 (47.49%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLH-HFQQMQEKFGL 534
            VFD M ERD ++WTT+V+A+ +  + + A ++ +QM E+                                       ++   + L++ Y   GN+ +A  +F ++   D +SWT +I GY+Q+     A+ +F +M + G+ P+ VT   V+ AC+H G++E G   H   +Q  F L
Sbjct:  181 VFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEK---------------------------------------NEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVL 320          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP390_ARATH (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.384e-40
Identity = 78/193 (40.41%), Postives = 126/193 (65.28%), Query Frame = 1
Query:    1 VFDRMG--ERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFS--PNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKR-IESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +FD +   ERD+V+WT ++  +SQ  +  +AL + S+M EE+    PN FTIS  LV+CA L  L  G+Q+H+   +   +     + + L+DMYAKCG+IS+A ++F+ +   + V+WT++++GY  HG  E AL +F  M ++G K + VT L VL+ACSH G++++G+ +F +M+  FG+ P  EHYAC+
Sbjct:  429 MFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACL 621          

HSP 2 Score: 108.612 bits (270), Expect = 2.204e-23
Identity = 59/173 (34.10%), Postives = 101/173 (58.38%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREE-EFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQM 516
            VFD M   D+VSW +++ ++++  + + AL +FS+M  E    P+  T+ +VL  CA L     G+Q+H     + +  +  + + L+DMYAKCG + EA  +F  +S  D VSW A+++GY+Q G  E+A++LF +M++  +K + VT+   +   +  GL  E L   +QM
Sbjct:  184 VFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQM 356          

HSP 3 Score: 102.064 bits (253), Expect = 2.063e-21
Identity = 62/203 (30.54%), Postives = 95/203 (46.80%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFS-----------------------------------PNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKR-------IESALLDMYAKCGNISEAVMIFERIS--NPDTVSWTAIISGYAQHGLSENALQLFRRM--EQLGVKPNSVTFLCVLFACS 471
            VF  M  +D+VSW  +V  +SQ   +E+A+ +F +M+EE+                                     PN+ T+ SVL  CA +  L  G+++H    K  +D  K        + + L+DMYAKC  +  A  +F+ +S    D V+WT +I GY+QHG +  AL+L   M  E    +PN+ T  C L AC+
Sbjct:  286 VFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACA 488          

HSP 4 Score: 86.2705 bits (212), Expect = 1.171e-16
Identity = 49/165 (29.70%), Postives = 88/165 (53.33%), Query Frame = 1
Query:   37 WTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRM-EQLGVKPNSVTFLCVLFACSHGGLVEEG--LHHFQQMQE 522
            W +L+ ++       + L +F  M    ++P+ +T   V  +C  +  +  G   H+L   TG  ++  + +AL+ MY++C ++S+A  +F+ +S  D VSW +II  YA+ G  + AL++F RM  + G +P+++T + VL  C+  G    G  LH F    E
Sbjct:   95 WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSE 259          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP181_ARATH (Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana GN=PCMP-E19 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 4.420e-40
Identity = 78/187 (41.71%), Postives = 119/187 (63.64%), Query Frame = 1
Query:    4 FDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            FD + ERD+  WT+L++ + Q S+ EEAL ++ +M+     PN  T++SVL +C+ L  L+ G+QVH    K G   +  I SAL  MY+KCG++ +  ++F R  N D VSW A+ISG + +G  + AL+LF  M   G++P+ VTF+ ++ ACSH G VE G  +F  M ++ GL P ++HYAC+
Sbjct:  380 FDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACM 566          

HSP 2 Score: 134.035 bits (336), Expect = 4.898e-31
Identity = 71/183 (38.80%), Postives = 111/183 (60.66%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLH-HFQQMQEKFGL-VPV 543
            +FD  G+R+ ++W+ +VT +SQ  E  EA+ +FS+M      P+++TI  VL +C+ +C+L+ G+Q+HS   K G +      +AL+DMYAK G +++A   F+ +   D   WT++ISGY Q+  +E AL L+RRM+  G+ PN  T   VL ACS    +E G   H   ++  FGL VP+
Sbjct:  278 MFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPI 460          

HSP 3 Score: 117.087 bits (292), Expect = 6.196e-26
Identity = 62/173 (35.84%), Postives = 107/173 (61.85%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQM--REEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG--LHHF 507
            VF  M ER+  +W+T+V+ ++     EEA+ +F+     +EE S + +  ++VL S A   ++  GRQ+H +  K GL     + +AL+ MY+KC +++EA  +F+   + ++++W+A+++GY+Q+G S  A++LF RM   G+KP+  T + VL ACS    +EEG  LH F
Sbjct:  175 VFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSF 347          

HSP 4 Score: 82.8037 bits (203), Expect = 1.295e-15
Identity = 40/137 (29.20%), Postives = 78/137 (56.93%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQ---CSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLF 402
            +F+ +  +D+VSW +L+T +SQ    S     + +F +MR ++  PN +T++ +  + + L     GRQ H+L  K     D  ++++L+ MY K G + + + +F  +   +T +W+ ++SGYA  G  E A+++F
Sbjct:   71 IFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVF 207          

HSP 5 Score: 69.3218 bits (168), Expect = 1.482e-11
Identity = 40/114 (35.09%), Postives = 61/114 (53.51%), Query Frame = 1
Query:  112 EEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHG---LSENALQLFRRMEQLGVKPNSVT 444
            + E +P+  T+   L   +    L  GR VH    +TG  T  +  + L++ YAKCG +++A  IF  I   D VSW ++I+GY+Q+G    S   +QLFR M    + PN+ T
Sbjct:    7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYT 120          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 7.539e-40
Identity = 75/188 (39.89%), Postives = 125/188 (66.49%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +FD+M +R +VSW T+++ +S    +++A+ +F +M++ +  PN  T+ SVL + + L  L+ G  +H     +G+  D  + SAL+DMY+KCG I +A+ +FER+   + ++W+A+I+G+A HG + +A+  F +M Q GV+P+ V ++ +L ACSHGGLVEEG  +F QM    GL P +EHY C+
Sbjct:  230 LFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCM 417          

HSP 2 Score: 96.6709 bits (239), Expect = 8.666e-20
Identity = 65/213 (30.52%), Postives = 103/213 (48.36%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAI--FSQMREEEF-SPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCG-----------NISE----------------------------------AVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            +F++M +R+  SW T++   S+  E +  +AI  F +M  +EF  PN+FT  SVL +CA    +  G+Q+H L  K G   D+ + S L+ MY  CG           NI E                                  A M+F+++     VSW  +ISGY+ +G  ++A+++FR M++  ++PN VT + VL A S  G +E G
Sbjct:   81 IFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG 293          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP378_ARATH (Pentatricopeptide repeat-containing protein At5g13270, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 7.539e-40
Identity = 80/188 (42.55%), Postives = 119/188 (63.30%), Query Frame = 1
Query:    4 FDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSP-NQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            F  + E + VSW+ +++ + Q S++EEA+  F  +R +  S  N FT +S+  +C+ L   + G QVH+   K  L   +  ESAL+ MY+KCG + +A  +FE + NPD V+WTA ISG+A +G +  AL+LF +M   G+KPNSVTF+ VL ACSH GLVE+G H    M  K+ + P ++HY C+
Sbjct:  343 FQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCM 530          

HSP 2 Score: 100.138 bits (248), Expect = 7.838e-21
Identity = 54/158 (34.18%), Postives = 85/158 (53.80%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVK-PNSVTFLCVLFACS 471
            VFD+M  +  V+ T L+  ++Q     +AL +F  +  E    + F  S VL +CA L  L+ G+Q+H+   K GL+++  + + L+D Y KC +   A   F+ I  P+ VSW+AIISGY Q    E A++ F+ +        NS T+  +  ACS
Sbjct:  241 VFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACS 398          

HSP 3 Score: 93.5893 bits (231), Expect = 7.336e-19
Identity = 52/157 (33.12%), Postives = 92/157 (58.60%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471
            +FD M E + VS TT+++A+++    ++A+ +FS M      P     +++L S      LDFGRQ+H+   + GL ++  IE+ +++MY KCG +  A  +F++++    V+ T ++ GY Q G + +AL+LF  +   GV+ +S  F  VL AC+
Sbjct:  140 LFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACA 296          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP280_ARATH (Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 7.539e-40
Identity = 82/186 (44.09%), Postives = 113/186 (60.75%), Query Frame = 1
Query:    7 DRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            D     D VSW T++TA  Q  +  E L +F  M   E  P+  T+ ++L  C  +  L  G QVH    KTGL  ++ I++ L+DMYAKCG++ +A  IF+ + N D VSW+ +I GYAQ G  E AL LF+ M+  G++PN VTF+ VL ACSH GLVEEGL  +  MQ + G+ P  EH +C+
Sbjct:  431 DFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCV 616          

HSP 2 Score: 106.301 bits (264), Expect = 1.094e-22
Identity = 54/167 (32.34%), Postives = 95/167 (56.89%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMRE-EEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGL 498
            VF  +  +D++SW++++   SQ     EAL+   +M     F PN++   S L +C+ L   D+G Q+H LC K+ L  +     +L DMYA+CG ++ A  +F++I  PDT SW  II+G A +G ++ A+ +F +M   G  P++++   +L A +    + +G+
Sbjct:  225 VFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGM 391          

HSP 3 Score: 101.679 bits (252), Expect = 2.694e-21
Identity = 54/158 (34.18%), Postives = 91/158 (57.59%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGV-KPNSVTFLCVLFACS 471
            VFD M ER++VS+T+++T +SQ  +  EA+ ++ +M +E+  P+QF   S++ +CA    +  G+Q+H+   K    +    ++AL+ MY +   +S+A  +F  I   D +SW++II+G++Q G    AL   + M   GV  PN   F   L ACS
Sbjct:  124 VFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 281          

HSP 4 Score: 82.0333 bits (201), Expect = 2.209e-15
Identity = 48/157 (30.57%), Postives = 79/157 (50.32%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERI-SNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFAC 468
            VFD++   D  SW  ++   +     +EA+++FSQMR   F P+  ++ S+L +      L  G Q+HS   K G   D  + ++LL MY  C ++     +FE   +N D+VSW  I++   QH      L+LF+ M     +P+ +T   +L  C
Sbjct:  327 VFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGC 483          

HSP 5 Score: 74.7146 bits (182), Expect = 3.527e-13
Identity = 38/127 (29.92%), Postives = 69/127 (54.33%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVH-SLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERIS-NPDTVSWTAIISGYAQHG 375
            +FD M  RD+VSW+TL+  ++Q    EEAL +F +M+     PN  T   VL +C+ +  ++ G +++ ++  + G+   K   S ++D+ A+ G ++EA    + +   PD V W  ++S     G
Sbjct:  530 IFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQG 656          

HSP 6 Score: 70.0922 bits (170), Expect = 8.686e-12
Identity = 37/133 (27.82%), Postives = 71/133 (53.38%), Query Frame = 1
Query:   76 WEEALAIFS-QMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471
            + EAL  F    +   F     T  S++ +C+    L  GR++H     +    D  + + +L MY KCG++ +A  +F+ +   + VS+T++I+GY+Q+G    A++L+ +M Q  + P+   F  ++ AC+
Sbjct:   47 YREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACA 179          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP301_ARATH (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana GN=PCMP-H24 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.286e-39
Identity = 78/188 (41.49%), Postives = 119/188 (63.30%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +FD+M +RD VSW  ++  +SQ     EAL +F QM  E    N+ + SS L +CA +  L+ G+Q+H    K G +T   + +ALL MY KCG+I EA  +F+ ++  D VSW  +I+GY++HG  E AL+ F  M++ G+KP+  T + VL ACSH GLV++G  +F  M + +G++P  +HYAC+
Sbjct:  365 LFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACM 552          

HSP 2 Score: 77.411 bits (189), Expect = 5.441e-14
Identity = 59/198 (29.80%), Postives = 93/198 (46.97%), Query Frame = 1
Query:    4 FDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVL----VSCAGLCF--LDFGRQVHSLCFKTGLDTDKRIESA-----------------LLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS-----------HGGLVEEG 495
            FD M  RD+VSW T++T ++Q  + +EA  +F +   ++       +S  +    V  A   F  +    +V       G    +R+E A                 ++  YA+CG ISEA  +F+++   D VSW A+I+GY+Q G S  AL+LF +ME+ G + N  +F   L  C+           HG LV+ G
Sbjct:  242 FDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGG 439          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PPR14_ARATH (Pentatricopeptide repeat-containing protein At1g06140, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E61 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.680e-39
Identity = 75/188 (39.89%), Postives = 118/188 (62.77%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +F+   +R++V WTTL++  ++C    EA  +F QM  E   PNQ T++++LVSC+ L  L  G+ VH    + G++ D    ++ +DMYA+CGNI  A  +F+ +   + +SW+++I+ +  +GL E AL  F +M+   V PNSVTF+ +L ACSH G V+EG   F+ M   +G+VP  EHYAC+
Sbjct:  268 LFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACM 455          

HSP 2 Score: 86.6557 bits (213), Expect = 8.968e-17
Identity = 41/154 (26.62%), Postives = 83/154 (53.90%), Query Frame = 1
Query:   19 ERDMVSWTTLVTAHSQCSE--WEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSH 474
            +R+  SW T+++ +S+     + + L ++++MR      + F +   + +C GL  L+ G  +H L  K GLD D  +  +L++MYA+ G +  A  +F+ I   ++V W  ++ GY ++       +LF  M   G+  +++T +C++ AC +
Sbjct:   69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGN 222          

HSP 3 Score: 84.7297 bits (208), Expect = 3.408e-16
Identity = 46/166 (27.71%), Postives = 85/166 (51.20%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTG-LDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            VFD +  R+ V W  L+  + + S+  E   +F  MR+   + +  T+  ++ +C  +     G+ VH +  +   +D    ++++++DMY KC  +  A  +FE   + + V WT +ISG+A+   +  A  LFR+M +  + PN  T   +L +CS  G +  G
Sbjct:  166 VFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHG 331          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP347_ARATH (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana GN=PCMP-H53 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.194e-39
Identity = 77/187 (41.18%), Postives = 119/187 (63.64%), Query Frame = 1
Query:    4 FDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            FD +   D V+WTT+++   +  E E A  +FSQMR     P++FTI+++  + + L  L+ GRQ+H+   K     D  + ++L+DMYAKCG+I +A  +F+RI   +  +W A++ G AQHG  +  LQLF++M+ LG+KP+ VTF+ VL ACSH GLV E   H + M   +G+ P +EHY+C+
Sbjct:  575 FDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCL 761          

HSP 2 Score: 110.153 bits (274), Expect = 7.574e-24
Identity = 53/157 (33.76%), Postives = 91/157 (57.96%), Query Frame = 1
Query:   25 DMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            D+V+W  ++  ++Q  +  + L +F+ M ++    + FT+++V  +C  L  ++ G+QVH+   K+G D D  + S +LDMY KCG++S A   F+ I  PD V+WT +ISG  ++G  E A  +F +M  +GV P+  T   +  A S    +E+G
Sbjct:  481 DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQG 637          

HSP 3 Score: 92.8189 bits (229), Expect = 1.251e-18
Identity = 46/153 (30.07%), Postives = 81/153 (52.94%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEW-----EEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVT 444
            VFD+M +RD+VSW +++ A++Q SE      ++A  +F  +R++    ++ T+S +L  C    ++      H    K GLD D+ +  AL+++Y K G + E  ++FE +   D V W  ++  Y + G  E A+ L       G+ PN +T
Sbjct:   96 VFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT 248          

HSP 4 Score: 90.5077 bits (223), Expect = 6.211e-18
Identity = 53/166 (31.93%), Postives = 88/166 (53.01%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLC-FLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            VFD M ERD++SW +++   +Q     EA+ +F Q+      P+Q+T++SVL + + L   L   +QVH    K    +D  + +AL+D Y++   + EA ++FER  N D V+W A+++GY Q       L+LF  M + G + +  T   V   C     + +G
Sbjct:  372 VFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQG 536          

HSP 5 Score: 82.0333 bits (201), Expect = 2.209e-15
Identity = 47/148 (31.76%), Postives = 79/148 (53.38%), Query Frame = 1
Query:   73 EWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQM 516
            ++   L  F+ M E +   +Q T   +L +   +  L  G+QVH +  K GLD    + ++L++MY K      A  +F+ +S  D +SW ++I+G AQ+GL   A+ LF ++ + G+KP+  T   VL A S    + EGL   +Q+
Sbjct:  295 QYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS---LPEGLSLSKQV 439          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP330_ARATH (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 2.865e-39
Identity = 72/189 (38.10%), Postives = 128/189 (67.72%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQL-GVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            VFD+M E+D+V+W +++   ++  + EEALA++++M  +   P+ FTI S+L +CA +  L  G++VH    K GL  +    + LLD+YA+CG + EA  +F+ + + ++VSWT++I G A +G  + A++LF+ ME   G+ P  +TF+ +L+ACSH G+V+EG  +F++M+E++ + P +EH+ C+
Sbjct:  178 VFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCM 366          

HSP 2 Score: 91.6633 bits (226), Expect = 2.788e-18
Identity = 41/154 (26.62%), Postives = 86/154 (55.84%), Query Frame = 1
Query:   37 WTTLVTAHSQCSEWEEALAIFSQMREEEF-SPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            W TL+  +++      A +++ +MR      P+  T   ++ +   +  +  G  +HS+  ++G  +   ++++LL +YA CG+++ A  +F+++   D V+W ++I+G+A++G  E AL L+  M   G+KP+  T + +L AC+  G +  G
Sbjct:   88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 241          
The following BLAST results are available for this feature:
BLAST of CF504011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 212
Match NameE-valueIdentityDescription
PPR15_ARATH3.384e-4040.00Pentatricopeptide repeat-containing protein At1g06... [more]
PP390_ARATH3.384e-4040.41Pentatricopeptide repeat-containing protein At5g16... [more]
PP181_ARATH4.420e-4041.71Pentatricopeptide repeat-containing protein At2g33... [more]
PP425_ARATH7.539e-4039.89Pentatricopeptide repeat-containing protein At5g48... [more]
PP378_ARATH7.539e-4042.55Pentatricopeptide repeat-containing protein At5g13... [more]
PP280_ARATH7.539e-4044.09Pentatricopeptide repeat-containing protein At3g53... [more]
PP301_ARATH1.286e-3941.49Pentatricopeptide repeat-containing protein At4g02... [more]
PPR14_ARATH1.680e-3939.89Pentatricopeptide repeat-containing protein At1g06... [more]
PP347_ARATH2.194e-3941.18Pentatricopeptide repeat-containing protein At4g33... [more]
PP330_ARATH2.865e-3938.10Pentatricopeptide repeat-containing protein At4g21... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-499 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-12_C10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504011 ID=CF504011; Name=CF504011; organism=Citrus sinensis; type=EST; length=568bp
GTTTTTGACAGGATGGGGGAGAGAGATATGGTGTCTTGGACAACTCTTGT
GACTGCTCACTCTCAATGTTCTGAATGGGAGGAAGCACTTGCGATTTTTT
CCCAAATGAGGGAGGAAGAATTTAGTCCTAACCAGTTCACAATTTCCAGT
GTTCTTGTATCTTGTGCTGGCCTTTGTTTTCTAGATTTTGGTCGGCAAGT
TCATAGTCTTTGTTTCAAGACTGGGTTGGACACTGACAAGCGCATAGAAA
GTGCTTTGTTGGACATGTATGCCAAATGTGGCAATATAAGTGAGGCAGTG
ATGATATTTGAAAGGATTTCCAACCCTGATACTGTTTCATGGACAGCTAT
AATATCGGGTTATGCCCAGCACGGTCTCTCGGAAAATGCCCTTCAACTCT
TTAGAAGAATGGAACAGTTGGGTGTGAAGCCTAACTCTGTTACCTTTCTC
TGTGTTCTGTTTGCTTGCAGCCATGGAGGACTGGTAGAGGAAGGCCTGCA
CCATTTTCAACAAATGCAGGAAAAATTTGGTCTGGTGCCAGTGATGGAAC
ATTATGCTTGTATTGGTG
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