CF504011
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP320_ARATH (Pentatricopeptide repeat-containing protein At4g18750, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 8.055e-42 Identity = 77/189 (40.74%), Postives = 126/189 (66.67%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEE-FSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 VF M +D++SW T++ +S+ EAL++F+ + EE+ FSP++ T++ VL +CA L D GR++H + G +D+ + ++L+DMYAKCG + A M+F+ I++ D VSWT +I+GY HG + A+ LF +M Q G++ + ++F+ +L+ACSH GLV+EG F M+ + + P +EHYACI Sbjct: 454 VFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACI 642 HSP 2 Score: 121.324 bits (303), Expect = 3.286e-27 Identity = 62/174 (35.63%), Postives = 99/174 (56.90%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQE 522 VFD M ERD++SW +++ + E+ L++F QM + TI SV CA + GR VHS+ K + R + LLDMY+KCG++ A +F +S+ VS+T++I+GYA+ GL+ A++LF ME+ G+ P+ T VL C+ L++EG + ++E Sbjct: 252 VFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE 425 HSP 3 Score: 114.005 bits (284), Expect = 5.245e-25 Identity = 59/166 (35.54%), Postives = 98/166 (59.04%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFR-RMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 VF M +R +VS+T+++ +++ EA+ +F +M EE SP+ +T+++VL CA LD G++VH + L D + +AL+DMYAKCG++ EA ++F + D +SW II GY+++ + AL LF +E+ P+ T CVL AC+ ++G Sbjct: 353 VFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKG 518 HSP 4 Score: 80.4925 bits (197), Expect = 6.427e-15 Identity = 41/165 (24.85%), Postives = 80/165 (48.48%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 VFD + + W L+ ++ ++ ++ +F +M + +T S V S + L + G Q+H K+G + ++L+ Y K + A +F+ ++ D +SW +II+GY +GL+E L +F +M G++ + T + V C+ L+ G Sbjct: 151 VFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG 315
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 1.794e-41 Identity = 77/188 (40.96%), Postives = 120/188 (63.83%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +FD E+ + SW +++ ++Q E+A+++F +M++ EFSPN TI+ +L +CA L L G+ VH L T ++ + +AL+ MYAKCG+I+EA +F+ ++ + V+W +ISGY HG + AL +F M G+ P VTFLCVL+ACSH GLV+EG F M ++G P ++HYAC+ Sbjct: 376 LFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACM 563 HSP 2 Score: 90.1225 bits (222), Expect = 8.111e-18 Identity = 47/159 (29.56%), Postives = 84/159 (52.83%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSP-NQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSH 474 VFDRM E+D + W T+++ + + + E++ +F + E + + T+ +L + A L L G Q+HSL KTG + + + + +Y+KCG I +F PD V++ A+I GY +G +E +L LF+ + G + S T + ++ H Sbjct: 176 VFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGH 334 HSP 3 Score: 87.4261 bits (215), Expect = 5.258e-17 Identity = 49/165 (29.70%), Postives = 85/165 (51.52%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 +F + D+V++ ++ ++ E E +L++F ++ T+ S LV +G L + +H C K+ + + +AL +Y+K I A +F+ SW A+ISGY Q+GL+E+A+ LFR M++ PN VT C+L AC+ G + G Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVS-LVPVSGHLMLIYA--IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLG 439
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PPR75_ARATH (Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 5.221e-41 Identity = 76/188 (40.43%), Postives = 120/188 (63.83%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 VFD M R++V+WT L+ + Q +++ + +F +M + + +PN+ T+SSVL +CA + L GR+VH K ++ + + L+D+Y KCG + EA+++FER+ + +WTA+I+G+A HG + +A LF M V PN VTF+ VL AC+HGGLVEEG F M+ +F + P +HYAC+ Sbjct: 262 VFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACM 449 HSP 2 Score: 105.916 bits (263), Expect = 1.428e-22 Identity = 55/166 (33.13%), Postives = 92/166 (55.42%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTG-LDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 +FD ++D+V+WT ++ + EA+ F +M++ + N+ T+ SVL + + + FGR VH L +TG + D I S+L+DMY KC +A +F+ + + + V+WTA+I+GY Q + + +F M + V PN T VL AC+H G + G Sbjct: 160 LFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRG 325
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP398_ARATH (Pentatricopeptide repeat-containing protein At5g27110 OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 5.221e-41 Identity = 78/188 (41.49%), Postives = 116/188 (61.70%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 VF + + SW +++++ W +A+ ++ QM P+ T +SVL +C+ L L+ G+Q+H ++ L+TD+ + SALLDMY+KCGN EA IF I D VSWT +IS Y HG AL F M++ G+KP+ VT L VL AC H GL++EGL F QM+ K+G+ P++EHY+C+ Sbjct: 366 VFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCM 553 HSP 2 Score: 124.405 bits (311), Expect = 3.881e-28 Identity = 55/157 (35.03%), Postives = 93/157 (59.24%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471 VFD M ERD+ SW T+++ Q E E+AL +F +M F PN +++ + +C+ L +L+ G+++H C K G + D+ + SAL+DMY KC + A +F+++ V+W ++I GY G S++ +++ RM G +P+ T +L ACS Sbjct: 164 VFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACS 320 HSP 3 Score: 94.7449 bits (234), Expect = 3.293e-19 Identity = 48/165 (29.09%), Postives = 91/165 (55.15%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 VF +M + +V+W +++ + + + + I ++M E P+Q T++S+L++C+ L G+ +H ++ ++ D + +L+D+Y KCG + A +F + SW +IS Y G A++++ +M +GVKP+ VTF VL ACS +E+G Sbjct: 265 VFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKG 429 HSP 4 Score: 93.9745 bits (232), Expect = 5.617e-19 Identity = 54/167 (32.34%), Postives = 89/167 (53.29%), Query Frame = 1 Query: 1 VFDRMGER-DMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFS-PNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 VF+ R D+ W +L++ +S+ S + + L +F ++ P+ FT +V+ + L GR +H+L K+G D + S+L+ MYAK ++ +F+ + D SW +IS + Q G +E AL+LF RME G +PNSV+ + ACS +E G Sbjct: 61 VFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERG 227
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP147_ARATH (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 5.221e-41 Identity = 78/188 (41.49%), Postives = 121/188 (64.36%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 VFD M D + W +++ +Q S + AL +F +M+ F Q T++SVL +C GL L+ G Q H K D D + +AL+DMY KCG++ +A+ +F ++ D ++W+ +ISG AQ+G S+ AL+LF RM+ G KPN +T + VLFACSH GL+E+G ++F+ M++ +G+ PV EHY C+ Sbjct: 216 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCM 401 HSP 2 Score: 123.635 bits (309), Expect = 6.620e-28 Identity = 62/166 (37.35%), Postives = 104/166 (62.65%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGL 498 +FD+M +R+++SWTT+++A+S+C ++AL + M + PN +T SSVL SC G+ + R +H K GL++D + SAL+D++AK G +A+ +F+ + D + W +II G+AQ+ S+ AL+LF+RM++ G T VL AC+ L+E G+ Sbjct: 118 LFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGM 280
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PPR84_ARATH (Pentatricopeptide repeat-containing protein At1g56690, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 8.906e-41 Identity = 78/187 (41.71%), Postives = 117/187 (62.57%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYAC 561 VFD M +RD +W ++ A+ + EAL +F+QM+++ P+ ++ S+L CA L L +GRQVH+ + D D + S L+ MY KCG + +A ++F+R S+ D + W +IISGYA HGL E AL++F M G PN VT + +L ACS+ G +EEGL F+ M+ KF + P +EHY+C Sbjct: 287 VFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSC 473
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP449_ARATH (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.163e-40 Identity = 76/188 (40.43%), Postives = 118/188 (62.77%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +F +M E++ +SWTT+++ + Q +EAL +F +M+ + P+ ++++ L +CA L L+ G+ +HS KT + D + L+DMYAKCG + EA+ +F+ I +WTA+ISGYA HG A+ F M+++G+KPN +TF VL ACS+ GLVEEG F M+ + L P +EHY CI Sbjct: 203 LFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCI 390 HSP 2 Score: 92.4337 bits (228), Expect = 1.634e-18 Identity = 51/173 (29.48%), Postives = 87/173 (50.29%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQ 519 VFD D W ++ S E E +L ++ +M N +T S+L +C+ L + Q+H+ K G + D ++L++ YA GN A ++F+RI PD VSW ++I GY + G + AL LFR+M + N++++ ++ + +E L F +MQ Sbjct: 71 VFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKM----AEKNAISWTTMISGYVQADMNKEALQLFHEMQ 239
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP268_ARATH (Putative pentatricopeptide repeat-containing protein At3g47840 OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.163e-40 Identity = 77/188 (40.96%), Postives = 118/188 (62.77%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +F M RD++SW+T++ + Q EE FS MR+ P F ++S+L + ++ GRQVH+L GL+ + + S+L++MY+KCG+I EA MIF D VS TA+I+GYA+HG S+ A+ LF + ++G +P+SVTF+ VL AC+H G ++ G H+F MQE + + P EHY C+ Sbjct: 367 LFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCM 554 HSP 2 Score: 115.161 bits (287), Expect = 2.355e-25 Identity = 54/165 (32.73%), Postives = 91/165 (55.15%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 +F+ M ERD+VSWT+L+ A+ + + +A+ F +MR + PN+ T +S+ +CA L L +G Q+H GL+ + ++++ MY+ CGN+ A ++F+ + D +SW+ II GY Q G E + F M Q G KP +L + ++E G Sbjct: 266 LFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGG 430 HSP 3 Score: 102.064 bits (253), Expect = 2.063e-21 Identity = 50/157 (31.85%), Postives = 83/157 (52.87%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471 VF M R+ V+WT ++T ++E L FS+M E + +T + L +CAGL + +G+ +H+ G T + ++L MY +CG + + + +FE +S D VSWT++I Y + G A++ F +M V PN TF + AC+ Sbjct: 165 VFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACA 321 HSP 4 Score: 94.7449 bits (234), Expect = 3.293e-19 Identity = 52/159 (32.70%), Postives = 85/159 (53.46%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMR--EEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471 VFD+M D+VSWT+++ + + +EAL +FS MR + SP+ +S VL +C + +G +H+ KT L + + S+LLDMY + G I ++ +F + + V+WTAII+G G + L F M + ++ TF L AC+ Sbjct: 62 VFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACA 220
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.984e-40 Identity = 85/188 (45.21%), Postives = 115/188 (61.17%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 VF R+ RD +SW +LV + Q + EAL +F QM + P SSV+ +CA L L G+Q+H + G ++ I SAL+DMY+KCGNI A IF+R++ D VSWTAII G+A HG A+ LF M++ GVKPN V F+ VL ACSH GLV+E +F M + +GL +EHYA + Sbjct: 299 VFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAV 486 HSP 2 Score: 118.627 bits (296), Expect = 2.130e-26 Identity = 57/158 (36.08%), Postives = 97/158 (61.39%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSH 474 VF+ M +D+VS+ T++ ++Q +E+AL + +M + P+ FT+SSVL + + G+++H + G+D+D I S+L+DMYAK I ++ +F R+ D +SW ++++GY Q+G AL+LFR+M VKP +V F V+ AC+H Sbjct: 198 VFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAH 355
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP151_ARATH (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.984e-40 Identity = 76/194 (39.18%), Postives = 118/194 (60.82%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVH------SLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +F +M ER++VSW L+ ++Q E EEAL++F ++ E P ++ +++L +CA L L G Q H F++G + D + ++L+DMY KCG + E ++F ++ D VSW A+I G+AQ+G AL+LFR M + G KP+ +T + VL AC H G VEEG H+F M FG+ P+ +HY C+ Sbjct: 342 MFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCM 535 HSP 2 Score: 124.02 bits (310), Expect = 5.069e-28 Identity = 62/165 (37.58%), Postives = 105/165 (63.64%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 +F M ERD +W ++V+ +Q EEAL F+ M +E F N+++ +SVL +C+GL ++ G QVHSL K+ +D I SAL+DMY+KCGN+++A +F+ + + + VSW ++I+ + Q+G + AL +F+ M + V+P+ VT V+ AC+ ++ G Sbjct: 108 LFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVG 272 HSP 3 Score: 107.457 bits (267), Expect = 4.910e-23 Identity = 63/189 (33.33%), Postives = 96/189 (50.79%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTG-LDTDKRIESALLDMYAKCGNISEAVMIFE-------------------------------RISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471 VFD MG+R++VSW +L+T Q EAL +F M E P++ T++SV+ +CA L + G++VH K L D + +A +DMYAKC I EA IF+ +++ + VSW A+I+GY Q+G +E AL LF +++ V P +F +L AC+ Sbjct: 209 VFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACA 397 The following BLAST results are available for this feature:
BLAST of CF504011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 212
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504011 ID=CF504011; Name=CF504011; organism=Citrus sinensis; type=EST; length=568bpback to top |