CF504011

Overview
NameCF504011
Unique NameCF504011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length568
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP189_ARATH (Pentatricopeptide repeat-containing protein At2g36980, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E73 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.349e-33
Identity = 67/188 (35.64%), Postives = 111/188 (59.04%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            VF    E+++V+WTT++T + +  + E+AL  F +M +     + F   +VL +C+GL  L  G+ +H      G      + +AL+++YAKCG+I EA   F  I+N D VSW  ++  +  HGL++ AL+L+  M   G+KP++VTF+ +L  CSH GLVEEG   F+ M + + +   ++H  C+
Sbjct:  293 VFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCM 480          

HSP 2 Score: 98.2117 bits (243), Expect = 2.979e-20
Identity = 56/190 (29.47%), Postives = 96/190 (50.53%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFER-------------------------------ISNPDTV--SWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471
            VFD M E D V+W T++T++S+    +EA+A+F+Q+R  +  P+ ++ +++L +CA L  + FGR++ SL  ++G      + ++L+DMY KC +   A  +F                                 +  P  V  +W  +ISG+A  G  E+ L LF+ M +   KP+  TF  ++ ACS
Sbjct:   26 VFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACS 215          

HSP 3 Score: 88.5817 bits (218), Expect = 2.360e-17
Identity = 56/206 (27.18%), Postives = 95/206 (46.12%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSC-AGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERIS-------------------------------NPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS------HGGLVEEGLHH 504
            VF  M +R   +W  +++ H+ C + E  L++F +M E EF P+ +T SS++ +C A    + +GR VH++  K G  +    ++++L  Y K G+  +A+   E I                                  + V+WT +I+GY ++G  E AL+ F  M + GV  +   +  VL ACS      HG ++   L H
Sbjct:  160 VFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIH 365          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP114_ARATH (Pentatricopeptide repeat-containing protein At1g71420 OS=Arabidopsis thaliana GN=PCMP-H70 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.349e-33
Identity = 68/181 (37.57%), Postives = 112/181 (61.88%), Query Frame = 1
Query:   22 RDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            RD+V+W  ++TA +     E A+ +F Q+R+E+ SP+ +T SSVL +CAGL        +H+   K G   D  + ++L+  YAKCG++   + +F+ + + D VSW +++  Y+ HG  ++ L +F++M+   + P+S TF+ +L ACSH G VEEGL  F+ M EK   +P + HYAC+
Sbjct:  333 RDIVAWNGIITAFAVYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD---INPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACV 509          

HSP 2 Score: 97.0561 bits (240), Expect = 6.636e-20
Identity = 57/153 (37.25%), Postives = 84/153 (54.90%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGN---ISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFL 450
            VFD M ER++VSWT L+T + Q    +E   +FS M    F PN+FT+SSVL SC      + G+QVH L  K GL     + +A++ MY +C +     EA  +FE I   + V+W ++I+ +    L + A+ +F RM   GV  +  T L
Sbjct:  118 VFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSCR----YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLL 265          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PPR8_ARATH (Pentatricopeptide repeat-containing protein At1g03540 OS=Arabidopsis thaliana GN=PCMP-E4 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 5.233e-33
Identity = 65/188 (34.57%), Postives = 116/188 (61.70%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            VF+ M +++ VSW+ L+  + Q  E E+A+ IF +M E++     +   +VL +CAGL  +  G+++H    + G   +  +ESAL+D+Y K G I  A  ++ ++S  + ++W A++S  AQ+G  E A+  F  M + G+KP+ ++F+ +L AC H G+V+EG ++F  M + +G+ P  EHY+C+
Sbjct:  322 VFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCM 505          

HSP 2 Score: 114.775 bits (286), Expect = 3.075e-25
Identity = 60/158 (37.97%), Postives = 96/158 (60.76%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQM-REEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471
            VFD M E D++ WT +++A S+   +EEAL +F  M R +   P+  T  +VL +C  L  L  G+++H      G+ ++  +ES+LLDMY KCG++ EA  +F  +S  ++VSW+A++ GY Q+G  E A+++FR ME+     +   F  VL AC+
Sbjct:  220 VFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEE----KDLYCFGTVLKACA 373          

HSP 3 Score: 89.7373 bits (221), Expect = 1.059e-17
Identity = 54/178 (30.34%), Postives = 90/178 (50.56%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQ-LGVKPNSVTFLCVLFACS-----------HGGLVEEGL 498
            VFD    +D +SWT++++ +    E  +AL +F +M       N+FT+SS + +C+ L  +  GR  H +    G + +  I S L  +Y       +A  +F+ +  PD + WTA++S ++++ L E AL LF  M +  G+ P+  TF  VL AC            HG L+  G+
Sbjct:  119 VFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGI 296          

HSP 4 Score: 68.1662 bits (165), Expect = 3.301e-11
Identity = 42/139 (30.22%), Postives = 67/139 (48.20%), Query Frame = 1
Query:   82 EALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCG-NISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            EA+ I +     E        +S+L +C  +     G Q H+   K+GL+TD+ + ++LL +Y K G  + E   +F+     D +SWT+++SGY        AL++F  M   G+  N  T    + ACS  G V  G
Sbjct:   44 EAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLG 182          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP417_ARATH (Pentatricopeptide repeat-containing protein At5g44230 OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 5.233e-33
Identity = 70/191 (36.65%), Postives = 115/191 (60.21%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKR--IESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRM-EQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +F+ +  +DMV+WT +VT  +Q ++ +EAL  F +M +     ++ T++  + +CA L    +  +   +  K+G        I SAL+DMY+KCGN+ EAV +F  ++N +  +++++I G A HG ++ AL LF  M  Q  +KPN+VTF+  L ACSH GLV++G   F  M + FG+ P  +HY C+
Sbjct:  237 LFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCM 427          

HSP 2 Score: 93.2041 bits (230), Expect = 9.582e-19
Identity = 52/184 (28.26%), Postives = 93/184 (50.54%), Query Frame = 1
Query:   22 RDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKC-------------------------------GNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGG 480
            R+   WT ++  ++   +++EA+A++  MR+EE +P  FT S++L +C  +  L+ GRQ H+  F+        + + ++DMY KC                               GN+  A  +FE +   D V+WTA+++G+AQ+   + AL+ F RME+ G++ + VT    + AC+  G
Sbjct:  112 RNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLG 295          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP188_ARATH (Pentatricopeptide repeat-containing protein At2g36730 OS=Arabidopsis thaliana GN=PCMP-E44 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 6.835e-33
Identity = 75/189 (39.68%), Postives = 119/189 (62.96%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLF-RRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            VFD M ER++VSW +++TA  +  +       F +M  + F P++ T+  +L +C G   L  G+ VHS      L+ + R+ +AL+DMYAK G +  A ++FER+ + +  +W+A+I G AQ+G +E ALQLF + M++  V+PN VTFL VL ACSH GLV++G  +F +M++   + P+M HY  +
Sbjct:  170 VFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGN--LSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAM 356          

HSP 2 Score: 75.8702 bits (185), Expect = 1.583e-13
Identity = 45/167 (26.95%), Postives = 77/167 (46.11%), Query Frame = 1
Query:   34 SWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGL 534
            +W  L   +S      E++ ++S+M+     PN+ T   +L +CA    L  GRQ+     K G D D  + + L+ +Y  C   S+A  +F+ ++  + VSW +I++   ++G      + F  M      P+  T + +L AC  G L    L H Q M  +  L
Sbjct:   80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG-GNLSLGKLVHSQVMVRELEL 245          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP237_ARATH (Pentatricopeptide repeat-containing protein At3g16610 OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 8.927e-33
Identity = 69/188 (36.70%), Postives = 104/188 (55.32%), Query Frame = 1
Query:    4 FDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQE-KFGLVPVMEHYACI 564
            F  +G +D++S+ +L+T        EE+  +F +MR     P+  T+  VL +C+ L  L  G   H  C   G   +  I +AL+DMY KCG +  A  +F+ +   D VSW  ++ G+  HGL + AL LF  M++ GV P+ VT L +L ACSH GLV+EG   F  M    F ++P ++HY C+
Sbjct:  366 FSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCM 553          

HSP 2 Score: 93.9745 bits (232), Expect = 5.617e-19
Identity = 49/156 (31.41%), Postives = 86/156 (55.13%), Query Frame = 1
Query:   31 VSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQL-GVKPNSVTFLCVLFACSHGGLVEEG 495
            ++W  ++ A++     E+AL ++ +M      P ++T   VL +CAGL  +D G+ +HS    +   TD  + +AL+D YAKCG +  A+ +F+ +   D V+W A+ISG++ H    + + LF  M ++ G+ PN  T + +  A    G + EG
Sbjct:   69 IAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREG 224          

HSP 3 Score: 82.0333 bits (201), Expect = 2.209e-15
Identity = 47/160 (29.38%), Postives = 80/160 (50.00%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQM--REEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSH 474
            VFD   +++ V+W+ ++  + +    +EA  +F QM   +         I  +L+ CA    L  GR VH    K G   D  +++ ++  YAK G++ +A   F  I   D +S+ ++I+G   +   E + +LF  M   G++P+  T L VL ACSH
Sbjct:  262 VFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSH 421          

HSP 4 Score: 75.0998 bits (183), Expect = 2.700e-13
Identity = 42/138 (30.43%), Postives = 73/138 (52.90%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMRE-EEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRM 411
            VFD M +RDMV+W  +++  S      + + +F  MR  +  SPN  TI  +  +      L  G+ VH  C + G   D  +++ +LD+YAK   I  A  +F+     + V+W+A+I GY ++ + + A ++F +M
Sbjct:  160 VFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQM 297          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP428_ARATH (Pentatricopeptide repeat-containing protein At5g50990 OS=Arabidopsis thaliana GN=PCMP-H59 PE=2 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 1.523e-32
Identity = 67/189 (35.45%), Postives = 115/189 (60.85%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEAL-AIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            V     ++++++W  ++  + +  ++EEAL A+ + +   +  PN+F+ +S L +CA L  L   + VHSL   +G++ +  + SAL+D+YAKCG+I  +  +F  +   D   W A+I+G+A HGL+  A+++F  ME   V P+S+TFL +L  CSH GL+EEG  +F  M  +F + P +EHY  +
Sbjct:  120 VLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAM 308          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.523e-32
Identity = 66/188 (35.11%), Postives = 115/188 (61.17%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +FD+M   +++ W  +++ +++     EA+ +F +M  ++  P+  +I+S + +CA +  L+  R ++    ++    D  I SAL+DM+AKCG++  A ++F+R  + D V W+A+I GY  HG +  A+ L+R ME+ GV PN VTFL +L AC+H G+V EG   F +M +   + P  +HYAC+
Sbjct:  279 LFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACV 465          

HSP 2 Score: 118.242 bits (295), Expect = 2.781e-26
Identity = 58/158 (36.71%), Postives = 99/158 (62.66%), Query Frame = 1
Query:   19 ERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEE 492
            ER +VSWT +V+A++Q  E  EAL IFSQMR+ +  P+   + SVL +   L  L  GR +H+   K GL+ +  +  +L  MYAKCG ++ A ++F+++ +P+ + W A+ISGYA++G +  A+ +F  M    V+P++++    + AC+  G +E+
Sbjct:  184 ERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQ 341          

HSP 3 Score: 115.546 bits (288), Expect = 1.803e-25
Identity = 58/160 (36.25%), Postives = 95/160 (59.38%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPD--TVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVL--FAC 468
            VFD +    +  W  ++  +S+ + +++AL ++S M+    SP+ FT   +L +C+GL  L  GR VH+  F+ G D D  +++ L+ +YAKC  +  A  +FE +  P+   VSWTAI+S YAQ+G    AL++F +M ++ VKP+ V  + VL  F C
Sbjct:   75 VFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTC 234          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PPR57_ARATH (Pentatricopeptide repeat-containing protein At1g25360 OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.989e-32
Identity = 67/186 (36.02%), Postives = 107/186 (57.53%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYA 558
            +F  M E++++SW  +++  ++    EE L +FS M+ E F P  +  S  + SCA L     G+Q H+   K G D+     +AL+ MYAKCG + EA  +F  +   D+VSW A+I+   QHG    A+ ++  M + G++P+ +T L VL ACSH GLV++G  +F  M+  + + P  +HYA
Sbjct:  373 IFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYA 558          

HSP 2 Score: 78.5666 bits (192), Expect = 2.442e-14
Identity = 57/211 (27.01%), Postives = 95/211 (45.02%), Query Frame = 1
Query:   22 RDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGR----QVHSLCFKTGLDTDKRIESALLDMYAKCGN----ISEAVMIFERISNPDTVSWT--------------------------------AIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG--LHHFQQMQEKF 528
            RD V +  ++T  S  ++   A+ +F +M+ E F P+ FT +SVL   AGL  +        Q H+   K+G      + +AL+ +Y+KC +    +  A  +F+ I   D  SWT                                A+ISGY   G  + AL++ RRM   G++ +  T+  V+ AC+  GL++ G  +H +   +E F
Sbjct:  111 RDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL---AGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDF 318          

HSP 3 Score: 73.1738 bits (178), Expect = 1.026e-12
Identity = 49/194 (25.26%), Postives = 86/194 (44.33%), Query Frame = 1
Query:   28 MVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAI-------------------------------ISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQM 516
            +V++  +++ +     ++EAL +  +M       ++FT  SV+ +CA    L  G+QVH+   +   D     +++L+ +Y KCG   EA  IFE++   D VSW A+                               ISG A++G  E  L+LF  M++ G +P    F   + +C+  G    G  +  Q+
Sbjct:  251 LVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQL 443          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP373_ARATH (Putative pentatricopeptide repeat-containing protein At5g09950 OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.989e-32
Identity = 72/190 (37.89%), Postives = 116/190 (61.05%), Query Frame = 1
Query:    1 VFDRMGER-DMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLG-VKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +F RM ER D V+W ++++ +       +AL +   M +     + F  ++VL + A +  L+ G +VH+   +  L++D  + SAL+DMY+KCG +  A+  F  +   ++ SW ++ISGYA+HG  E AL+LF  M+  G   P+ VTF+ VL ACSH GL+EEG  HF+ M + +GL P +EH++C+
Sbjct:  574 IFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCM 763          

HSP 2 Score: 100.138 bits (248), Expect = 7.838e-21
Identity = 67/186 (36.02%), Postives = 98/186 (52.69%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSC--AGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKC-GNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTF-LCVLFACSHGGLVEEGLHHFQQMQ---EKFGLV 537
            VFD M  R+ VSW  +V+ +S+  E +EAL     M +E    NQ+   SVL +C   G   + FGRQ+H L FK     D  + + L+ MY KC G++  A+  F  I   ++VSW +IIS Y+Q G   +A ++F  M+  G +P   TF   V  ACS   L E  +   +Q+    +K GL+
Sbjct:   58 VFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS---LTEPDVRLLEQIMCTIQKSGLL 240          

HSP 3 Score: 95.9005 bits (237), Expect = 1.478e-19
Identity = 55/158 (34.81%), Postives = 84/158 (53.16%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLS-ENALQLFRRMEQLGVKPNSVTFLCVLFACS 471
            VF  M ++D VSW +++T   Q   + EA+  +  MR  +  P  FT+ S L SCA L +   G+Q+H    K G+D +  + +AL+ +YA+ G ++E   IF  +   D VSW +II   A+   S   A+  F   ++ G K N +TF  VL A S
Sbjct:  371 VFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVS 528          

HSP 4 Score: 89.3521 bits (220), Expect = 1.384e-17
Identity = 54/168 (32.14%), Postives = 85/168 (50.60%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSE-WEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERIS-NPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGL 498
            +F  M E D VSW +++ A ++      EA+  F   +      N+ T SSVL + + L F + G+Q+H L  K  +  +   E+AL+  Y KCG +     IF R++   D V+W ++ISGY  + L   AL L   M Q G + +S  +  VL A +    +E G+
Sbjct:  472 IFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGM 639          

HSP 5 Score: 74.7146 bits (182), Expect = 3.527e-13
Identity = 52/162 (32.10%), Postives = 86/162 (53.09%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREE-EFSPNQFTI---SSVLVSCAGLCFLDFGRQVHSLCFKTGL-DTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471
            VF++M  R+ V+   L+    +    EEA  +F  M    + SP  + I   S    S A    L  GR+VH     TGL D    I + L++MYAKCG+I++A  +F  +++ D+VSW ++I+G  Q+G    A++ ++ M +  + P S T +  L +C+
Sbjct:  265 VFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCA 426          

HSP 6 Score: 67.3958 bits (163), Expect = 5.630e-11
Identity = 41/150 (27.33%), Postives = 73/150 (48.67%), Query Frame = 1
Query:   22 RDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCF--KTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRM-EQLGVKPNSVTFLCVLF 462
            ++ VSW ++++ +SQ  +   A  IFS M+ +   P ++T  S++ +   L   D       +C   K+GL TD  + S L+  +AK G++S A  +F ++   + V+   ++ G  +    E A +LF  M   + V P S   L   F
Sbjct:  169 KNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSF 318          
The following BLAST results are available for this feature:
BLAST of CF504011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 212
Match NameE-valueIdentityDescription
PP189_ARATH2.349e-3335.64Pentatricopeptide repeat-containing protein At2g36... [more]
PP114_ARATH2.349e-3337.57Pentatricopeptide repeat-containing protein At1g71... [more]
PPR8_ARATH5.233e-3334.57Pentatricopeptide repeat-containing protein At1g03... [more]
PP417_ARATH5.233e-3336.65Pentatricopeptide repeat-containing protein At5g44... [more]
PP188_ARATH6.835e-3339.68Pentatricopeptide repeat-containing protein At2g36... [more]
PP237_ARATH8.927e-3336.70Pentatricopeptide repeat-containing protein At3g16... [more]
PP428_ARATH1.523e-3235.45Pentatricopeptide repeat-containing protein At5g50... [more]
PP224_ARATH1.523e-3235.11Pentatricopeptide repeat-containing protein At3g12... [more]
PPR57_ARATH1.989e-3236.02Pentatricopeptide repeat-containing protein At1g25... [more]
PP373_ARATH1.989e-3237.89Putative pentatricopeptide repeat-containing prote... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-499 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-12_C10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504011 ID=CF504011; Name=CF504011; organism=Citrus sinensis; type=EST; length=568bp
GTTTTTGACAGGATGGGGGAGAGAGATATGGTGTCTTGGACAACTCTTGT
GACTGCTCACTCTCAATGTTCTGAATGGGAGGAAGCACTTGCGATTTTTT
CCCAAATGAGGGAGGAAGAATTTAGTCCTAACCAGTTCACAATTTCCAGT
GTTCTTGTATCTTGTGCTGGCCTTTGTTTTCTAGATTTTGGTCGGCAAGT
TCATAGTCTTTGTTTCAAGACTGGGTTGGACACTGACAAGCGCATAGAAA
GTGCTTTGTTGGACATGTATGCCAAATGTGGCAATATAAGTGAGGCAGTG
ATGATATTTGAAAGGATTTCCAACCCTGATACTGTTTCATGGACAGCTAT
AATATCGGGTTATGCCCAGCACGGTCTCTCGGAAAATGCCCTTCAACTCT
TTAGAAGAATGGAACAGTTGGGTGTGAAGCCTAACTCTGTTACCTTTCTC
TGTGTTCTGTTTGCTTGCAGCCATGGAGGACTGGTAGAGGAAGGCCTGCA
CCATTTTCAACAAATGCAGGAAAAATTTGGTCTGGTGCCAGTGATGGAAC
ATTATGCTTGTATTGGTG
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