CF504011
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP323_ARATH (Pentatricopeptide repeat-containing protein At4g19191, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.989e-32 Identity = 70/189 (37.04%), Postives = 114/189 (60.32%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDK-RIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +FD M R VSWT +++ +++ + +EALA+F M + P+ T+ S++ C L+ G+ + + G D I +AL+DMY+KCG+I EA IF+ V+WT +I+GYA +G+ AL+LF +M L KPN +TFL VL AC+H G +E+G +F M++ + + P ++HY+C+ Sbjct: 313 LFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCM 501 HSP 2 Score: 100.523 bits (249), Expect = 6.002e-21 Identity = 55/160 (34.38%), Postives = 85/160 (53.12%), Query Frame = 1 Query: 16 GERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 G+R +VSW ++ A+S E +A ++ M EEF P+ T ++ SC L GR +HS G D D + + MY+K + A ++F+ +++ VSWT +ISGYA+ G + AL LF M + G KP+ VT L ++ C G +E G Sbjct: 217 GDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG 376 HSP 3 Score: 88.1965 bits (217), Expect = 3.082e-17 Identity = 43/130 (33.08%), Postives = 72/130 (55.38%), Query Frame = 1 Query: 82 EALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471 E+L +F +M+ F PN FT V +CA L + VH+ K+ +D + +A +DM+ KC ++ A +FER+ D +W A++SG+ Q G ++ A LFR M + P+SVT + ++ + S Sbjct: 35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSAS 164 HSP 4 Score: 86.2705 bits (212), Expect = 1.171e-16 Identity = 44/167 (26.35%), Postives = 87/167 (52.10%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPD--TVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 VF+RM ERD +W +++ Q ++A ++F +MR E +P+ T+ +++ S + L +H++ + G+D + + + Y KCG++ A ++FE I D VSW ++ Y+ G + +A L+ M + KP+ TF+ + +C + + +G Sbjct: 109 VFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQG 275
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP297_ARATH (Pentatricopeptide repeat-containing protein At4g01030, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=2 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 1.989e-32 Identity = 64/180 (35.56%), Postives = 105/180 (58.33%), Query Frame = 1 Query: 25 DMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 ++VSWT + + S+ + AL +F +M+EE PN T+S++L L L G++VH C + L D + +AL+DMY K G++ A+ IF I N SW ++ GYA G E + F M + G++P+++TF VL C + GLV+EG +F M+ ++G++P +EH +C+ Sbjct: 360 NVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCM 539 HSP 2 Score: 88.5817 bits (218), Expect = 2.360e-17 Identity = 51/180 (28.33%), Postives = 100/180 (55.56%), Query Frame = 1 Query: 25 DMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 D+V+W +L++ ++ ++A+A+ +M+ P+ +ISS+L + A L G+ +H + L D +E+ L+DMY K G + A M+F+ + + V+W +++SG + L ++A L RME+ G+KP+++T+ + + G E+ L +M+EK G+ P + + I Sbjct: 189 DIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEK-GVAPNVVSWTAI 367 HSP 3 Score: 88.1965 bits (217), Expect = 3.082e-17 Identity = 46/173 (26.59%), Postives = 94/173 (54.34%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQ 519 +FD M +RD ++W +V + + WE+A+ +F +M+ T+ +L C+ GRQ+H + GL+++ + ++L+ MY++ G + + +F + + + SW +I+S Y + G ++A+ L ME G+KP+ VT+ +L + GL ++ + ++MQ Sbjct: 45 LFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ 217
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP223_ARATH (Putative pentatricopeptide repeat-containing protein At3g11460 OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.989e-32 Identity = 67/188 (35.64%), Postives = 109/188 (57.98%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +FD M + +++W +++ +SQ + L ++ QM+ P+ FT+ SVL SCA L G +V L G + + +A + MYA+CGN+++A +F+ + VSWTA+I Y HG+ E L LF M + G++P+ F+ VL ACSH GL ++GL F+ M+ ++ L P EHY+C+ Sbjct: 213 LFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCL 400 HSP 2 Score: 103.219 bits (256), Expect = 9.259e-22 Identity = 52/170 (30.59%), Postives = 97/170 (57.06%), Query Frame = 1 Query: 31 VSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVP 540 V + L++ ++ S+ +A +F +M+E S + T+ ++ C +L GR +H C K GLD++ + ++ + MY KCG++ +F+ + ++W A+ISGY+Q+GL+ + L+L+ +M+ GV P+ T + VL +C+H G + G H ++ E G VP Sbjct: 122 VCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIG-HEVGKLVESNGFVP 290 HSP 3 Score: 84.7297 bits (208), Expect = 3.408e-16 Identity = 53/169 (31.36%), Postives = 88/169 (52.07%), Query Frame = 1 Query: 37 WTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPD----TVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS-----------HGGLVEEGL 498 W + + S + E+++++ M SP+ F+ +L SCA L G+Q+H K G +T+ + +AL+ MY KCG +++A +FE NP +V + A+ISGY + +A +FRRM++ GV +SVT L ++ C+ HG V+ GL Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFE--ENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGL 187
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP198_ARATH (Pentatricopeptide repeat-containing protein At2g41080 OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 1.989e-32 Identity = 69/189 (36.51%), Postives = 108/189 (57.14%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRM-EQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 V M R++V+W TL+ ++Q E L ++ M+ PN+ T +VL SC+ L G+Q+H+ K G + + S+L+ MY+KCG + +A F + D V W+++IS Y HG + A++LF M EQ ++ N V FL +L+ACSH GL ++GL F M EK+G P ++HY C+ Sbjct: 233 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCV 421 HSP 2 Score: 110.153 bits (274), Expect = 7.574e-24 Identity = 53/157 (33.76%), Postives = 88/157 (56.05%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471 VFD M +R + +W ++ Q EE L++F +M FSP+++T+ SV AGL + G+Q+H K GL+ D + S+L MY + G + + ++ + + V+W +I G AQ+G E L L++ M+ G +PN +TF+ VL +CS Sbjct: 132 VFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCS 288
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP197_ARATH (Pentatricopeptide repeat-containing protein At2g40720 OS=Arabidopsis thaliana GN=PCMP-E26 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.989e-32 Identity = 66/186 (35.48%), Postives = 113/186 (60.75%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYA 558 VF M +MV+W ++++ +S+ + E ++ +F+ M + P+ +I+SVLV+ + L G+ +H + G+ +D +++AL+DMY KCG A IF+++ + ++W +I GY HG AL LF M++ G P+ VTFL ++ AC+H G VEEG + F+ M++ +G+ P MEHYA Sbjct: 533 VFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYA 718 HSP 2 Score: 110.923 bits (276), Expect = 4.441e-24 Identity = 60/159 (37.74%), Postives = 99/159 (62.26%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFS--PNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471 VF M E+DMV+W +L++ + +++EAL +F M++++ S P+ ++SV +CAGL L FG QVH KTGL + + S+L+D+Y+KCG A+ +F +S + V+W ++IS Y+++ L E ++ LF M G+ P+SV+ VL A S Sbjct: 430 VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAIS 588 HSP 3 Score: 99.7525 bits (247), Expect = 1.024e-20 Identity = 55/179 (30.73%), Postives = 99/179 (55.31%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRM--EQLGVKPNSVTFLCVLFACS-----------HGGLVEEGL 498 VF + ++ + W +V A+++ AL +F MR++ P+ FT+S+V+ C+ L ++G+ VH+ FK + + IESALL +Y+KCG +A ++F+ + D V+W ++ISG ++G + AL++F M + +KP+S V AC+ HG +++ GL Sbjct: 329 VFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGL 507 HSP 4 Score: 78.5666 bits (192), Expect = 2.442e-14 Identity = 45/157 (28.66%), Postives = 74/157 (47.13%), Query Frame = 1 Query: 25 DMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 ++V W ++ E +L ++ + + + L +C+ FGRQ+H K GL D + ++LL MY+KCG + EA +F + + W A+++ YA++ +AL LF M Q V P+S T V+ CS GL G Sbjct: 236 NVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYG 392 HSP 5 Score: 77.0258 bits (188), Expect = 7.106e-14 Identity = 57/203 (28.08%), Postives = 98/203 (48.28%), Query Frame = 1 Query: 22 RDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVL-VSCA-GLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISN-PDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS-----------HGGLVEEGLHH-------FQQMQEKFGLVPVMEH-YACI 564 RD+ W +++ + + ++E + F +M P+ F++S V+ V C G + G+Q+H + LDTD +++AL+DMY K G +A +F I + + V W +I G+ G+ E++L L+ + VK S +F L ACS H +V+ GLH+ M K G+V E ++C+ Sbjct: 131 RDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCV 333 HSP 6 Score: 68.9366 bits (167), Expect = 1.935e-11 Identity = 45/157 (28.66%), Postives = 76/157 (48.41%), Query Frame = 1 Query: 49 VTAHSQCSEWEEALAIFSQMR-EEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFE-------RISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTF-LCVLFACSHGGLVEE 492 + A Q E+ +AL ++S+ F + FT S+L +C+ L L +G+ +H G D I ++L++MY KCG + AV +F+ +S D W ++I GY + + + FRRM GV+P++ + + V C G E Sbjct: 31 IRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRRE 187
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP441_ARATH (Pentatricopeptide repeat-containing protein At5g61800 OS=Arabidopsis thaliana GN=PCMP-E8 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 2.597e-32 Identity = 70/188 (37.23%), Postives = 106/188 (56.38%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +FD M RD+VSW +L++ ++Q + EA+ +F +M P+ I S L +CA G+ +H + L D + + L+D YAKCG I A+ IFE S+ +W A+I+G A HG E + FR+M G+KP+ VTF+ VL CSH GLV+E + F QM+ + + M+HY C+ Sbjct: 205 LFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCM 392
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP371_ARATH (Pentatricopeptide repeat-containing protein At5g08510 OS=Arabidopsis thaliana GN=PCMP-E20 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 2.597e-32 Identity = 71/190 (37.37%), Postives = 114/190 (60.00%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQM-REEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTV-SWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +FD M +++ SWTT+++ SQ + EAL +F M +++ PN T+ SVL +CA L L+ GR++ + G + + +A ++MY+KCG I A +FE + N + SW ++I A HG + AL LF +M + G KP++VTF+ +L AC HGG+V +G F+ M+E + P +EHY C+ Sbjct: 170 LFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCM 359
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP312_ARATH (Pentatricopeptide repeat-containing protein At4g14850 OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 2.597e-32 Identity = 72/190 (37.89%), Postives = 110/190 (57.89%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRM--EQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +F MG ++ VSW +LV A+ Q E E+A ++ + R++ + F ISSVL +CAG+ L+ GR +H+ K ++ + SAL+DMY KCG I ++ F+ + + V+ ++I GYA G + AL LF M G PN +TF+ +L ACS G VE G+ F M+ +G+ P EHY+CI Sbjct: 266 IFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCI 455 HSP 2 Score: 88.9669 bits (219), Expect = 1.807e-17 Identity = 45/157 (28.66%), Postives = 79/157 (50.32%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471 +FD + ER++ +W ++ EA+ F + R + PN T + L +C+ L+ G Q+H L ++G DTD + + L+D Y KC I + +IF + + VSW ++++ Y Q+ E A L+ R + V+ + VL AC+ Sbjct: 165 LFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACA 321 HSP 3 Score: 87.0409 bits (214), Expect = 6.867e-17 Identity = 49/150 (32.67%), Postives = 73/150 (48.67%), Query Frame = 1 Query: 22 RDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471 R++VSWT+L++ +Q + AL F +MR E PN FT + A L G+Q+H+L K G D + + DMY K +A +F+ I + +W A IS G A++ F ++ PNS+TF L ACS Sbjct: 71 RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACS 220
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP277_ARATH (Pentatricopeptide repeat-containing protein At3g50420 OS=Arabidopsis thaliana GN=PCMP-E85 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 2.597e-32 Identity = 71/188 (37.77%), Postives = 108/188 (57.45%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 VFD M ERD+V WT ++ HS+ E A+ F +M E+ + F++SSV+ +C+ + L G H L +TG D + AL+DMY K G A IF SNPD W +++ Y+QHG+ E AL F ++ + G P++VT+L +L ACSH G +G + QM+E+ G+ +HY+C+ Sbjct: 459 VFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQ-GIKAGFKHYSCM 645 HSP 2 Score: 107.457 bits (267), Expect = 4.910e-23 Identity = 54/156 (34.62%), Postives = 87/156 (55.77%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGV-KPNSVTFLCVLFA 465 +FD + RD V+W T++ + + E+ L F M P QFT S VL C+ L G+ +H+ + D +++ALLDMY CG++ EA +F RI NP+ VSW +IISG +++G E A+ ++RR+ ++ +P+ TF + A Sbjct: 256 IFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISA 411 HSP 3 Score: 91.2781 bits (225), Expect = 3.641e-18 Identity = 52/161 (32.30%), Postives = 87/161 (54.04%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEE-ALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGG 480 VFD+M R++VS+ L +A+S+ ++ A + + M E PN T +S++ CA L + G ++S K G + +++++L MY+ CG++ A IF+ ++N D V+W +I G ++ E+ L FR M GV P T+ VL CS G Sbjct: 154 VFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLG 314 HSP 4 Score: 69.3218 bits (168), Expect = 1.482e-11 Identity = 43/166 (25.90%), Postives = 84/166 (50.60%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQM-REEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 VF R+ ++VSW ++++ S+ E+A+ ++ ++ R P+++T S+ + + A G+ +H K G + + + LL MY K A +F+ + D V WT +I G+++ G SE A+Q F M + + + + V+ ACS ++ +G Sbjct: 357 VFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQG 522
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP167_ARATH (Pentatricopeptide repeat-containing protein At2g21090 OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.392e-32 Identity = 71/189 (37.57%), Postives = 107/189 (56.61%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNP-DTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +F M E++ VSWT L+ + + AL +F +M P QFT SS L + A + L G+++H +T + + + S+L+DMY+K G++ + +F + D V W +IS AQHGL AL++ M + V+PN T + +L ACSH GLVEEGL F+ M + G+VP EHYAC+ Sbjct: 267 LFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACL 455 HSP 2 Score: 99.7525 bits (247), Expect = 1.024e-20 Identity = 59/186 (31.72%), Postives = 84/186 (45.16%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPD-------------------------------TVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFA 465 VFD M ERD+VSW T+V ++Q EAL + + R N+F+ + +L +C L RQ H G ++ + +++D YAKCG + A F+ ++ D VSWTA+I+GY + G AL LFR+M LGVKP TF L A Sbjct: 135 VFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCA 320 The following BLAST results are available for this feature:
BLAST of CF504011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 212
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504011 ID=CF504011; Name=CF504011; organism=Citrus sinensis; type=EST; length=568bpback to top |