CF504011

Overview
NameCF504011
Unique NameCF504011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length568
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP323_ARATH (Pentatricopeptide repeat-containing protein At4g19191, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.989e-32
Identity = 70/189 (37.04%), Postives = 114/189 (60.32%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDK-RIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +FD M  R  VSWT +++ +++  + +EALA+F  M +    P+  T+ S++  C     L+ G+ + +     G   D   I +AL+DMY+KCG+I EA  IF+       V+WT +I+GYA +G+   AL+LF +M  L  KPN +TFL VL AC+H G +E+G  +F  M++ + + P ++HY+C+
Sbjct:  313 LFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCM 501          

HSP 2 Score: 100.523 bits (249), Expect = 6.002e-21
Identity = 55/160 (34.38%), Postives = 85/160 (53.12%), Query Frame = 1
Query:   16 GERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            G+R +VSW ++  A+S   E  +A  ++  M  EEF P+  T  ++  SC     L  GR +HS     G D D    +  + MY+K  +   A ++F+ +++   VSWT +ISGYA+ G  + AL LF  M + G KP+ VT L ++  C   G +E G
Sbjct:  217 GDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETG 376          

HSP 3 Score: 88.1965 bits (217), Expect = 3.082e-17
Identity = 43/130 (33.08%), Postives = 72/130 (55.38%), Query Frame = 1
Query:   82 EALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471
            E+L +F +M+   F PN FT   V  +CA L  +     VH+   K+   +D  + +A +DM+ KC ++  A  +FER+   D  +W A++SG+ Q G ++ A  LFR M    + P+SVT + ++ + S
Sbjct:   35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSAS 164          

HSP 4 Score: 86.2705 bits (212), Expect = 1.171e-16
Identity = 44/167 (26.35%), Postives = 87/167 (52.10%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPD--TVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            VF+RM ERD  +W  +++   Q    ++A ++F +MR  E +P+  T+ +++ S +    L     +H++  + G+D    + +  +  Y KCG++  A ++FE I   D   VSW ++   Y+  G + +A  L+  M +   KP+  TF+ +  +C +   + +G
Sbjct:  109 VFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQG 275          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP297_ARATH (Pentatricopeptide repeat-containing protein At4g01030, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 1.989e-32
Identity = 64/180 (35.56%), Postives = 105/180 (58.33%), Query Frame = 1
Query:   25 DMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            ++VSWT + +  S+   +  AL +F +M+EE   PN  T+S++L     L  L  G++VH  C +  L  D  + +AL+DMY K G++  A+ IF  I N    SW  ++ GYA  G  E  +  F  M + G++P+++TF  VL  C + GLV+EG  +F  M+ ++G++P +EH +C+
Sbjct:  360 NVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCM 539          

HSP 2 Score: 88.5817 bits (218), Expect = 2.360e-17
Identity = 51/180 (28.33%), Postives = 100/180 (55.56%), Query Frame = 1
Query:   25 DMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            D+V+W +L++ ++     ++A+A+  +M+     P+  +ISS+L + A    L  G+ +H    +  L  D  +E+ L+DMY K G +  A M+F+ +   + V+W +++SG +   L ++A  L  RME+ G+KP+++T+  +    +  G  E+ L    +M+EK G+ P +  +  I
Sbjct:  189 DIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEK-GVAPNVVSWTAI 367          

HSP 3 Score: 88.1965 bits (217), Expect = 3.082e-17
Identity = 46/173 (26.59%), Postives = 94/173 (54.34%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQ 519
            +FD M +RD ++W  +V  + +   WE+A+ +F +M+         T+  +L  C+       GRQ+H    + GL+++  + ++L+ MY++ G +  +  +F  + + +  SW +I+S Y + G  ++A+ L   ME  G+KP+ VT+  +L   +  GL ++ +   ++MQ
Sbjct:   45 LFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ 217          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP223_ARATH (Putative pentatricopeptide repeat-containing protein At3g11460 OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.989e-32
Identity = 67/188 (35.64%), Postives = 109/188 (57.98%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +FD M  + +++W  +++ +SQ     + L ++ QM+     P+ FT+ SVL SCA L     G +V  L    G   +  + +A + MYA+CGN+++A  +F+ +     VSWTA+I  Y  HG+ E  L LF  M + G++P+   F+ VL ACSH GL ++GL  F+ M+ ++ L P  EHY+C+
Sbjct:  213 LFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCL 400          

HSP 2 Score: 103.219 bits (256), Expect = 9.259e-22
Identity = 52/170 (30.59%), Postives = 97/170 (57.06%), Query Frame = 1
Query:   31 VSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVP 540
            V +  L++ ++  S+  +A  +F +M+E   S +  T+  ++  C    +L  GR +H  C K GLD++  + ++ + MY KCG++     +F+ +     ++W A+ISGY+Q+GL+ + L+L+ +M+  GV P+  T + VL +C+H G  + G H   ++ E  G VP
Sbjct:  122 VCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIG-HEVGKLVESNGFVP 290          

HSP 3 Score: 84.7297 bits (208), Expect = 3.408e-16
Identity = 53/169 (31.36%), Postives = 88/169 (52.07%), Query Frame = 1
Query:   37 WTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPD----TVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS-----------HGGLVEEGL 498
            W   +   +  S + E+++++  M     SP+ F+   +L SCA L     G+Q+H    K G +T+  + +AL+ MY KCG +++A  +FE   NP     +V + A+ISGY  +    +A  +FRRM++ GV  +SVT L ++  C+           HG  V+ GL
Sbjct:   21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFE--ENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGL 187          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP198_ARATH (Pentatricopeptide repeat-containing protein At2g41080 OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 1.989e-32
Identity = 69/189 (36.51%), Postives = 108/189 (57.14%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRM-EQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            V   M  R++V+W TL+  ++Q    E  L ++  M+     PN+ T  +VL SC+ L     G+Q+H+   K G  +   + S+L+ MY+KCG + +A   F    + D V W+++IS Y  HG  + A++LF  M EQ  ++ N V FL +L+ACSH GL ++GL  F  M EK+G  P ++HY C+
Sbjct:  233 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCV 421          

HSP 2 Score: 110.153 bits (274), Expect = 7.574e-24
Identity = 53/157 (33.76%), Postives = 88/157 (56.05%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471
            VFD M +R + +W  ++    Q    EE L++F +M    FSP+++T+ SV    AGL  +  G+Q+H    K GL+ D  + S+L  MY + G + +  ++   +   + V+W  +I G AQ+G  E  L L++ M+  G +PN +TF+ VL +CS
Sbjct:  132 VFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCS 288          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP197_ARATH (Pentatricopeptide repeat-containing protein At2g40720 OS=Arabidopsis thaliana GN=PCMP-E26 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 1.989e-32
Identity = 66/186 (35.48%), Postives = 113/186 (60.75%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYA 558
            VF  M   +MV+W ++++ +S+ +  E ++ +F+ M  +   P+  +I+SVLV+ +    L  G+ +H    + G+ +D  +++AL+DMY KCG    A  IF+++ +   ++W  +I GY  HG    AL LF  M++ G  P+ VTFL ++ AC+H G VEEG + F+ M++ +G+ P MEHYA
Sbjct:  533 VFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYA 718          

HSP 2 Score: 110.923 bits (276), Expect = 4.441e-24
Identity = 60/159 (37.74%), Postives = 99/159 (62.26%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFS--PNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471
            VF  M E+DMV+W +L++   +  +++EAL +F  M++++ S  P+   ++SV  +CAGL  L FG QVH    KTGL  +  + S+L+D+Y+KCG    A+ +F  +S  + V+W ++IS Y+++ L E ++ LF  M   G+ P+SV+   VL A S
Sbjct:  430 VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAIS 588          

HSP 3 Score: 99.7525 bits (247), Expect = 1.024e-20
Identity = 55/179 (30.73%), Postives = 99/179 (55.31%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRM--EQLGVKPNSVTFLCVLFACS-----------HGGLVEEGL 498
            VF  + ++ +  W  +V A+++      AL +F  MR++   P+ FT+S+V+  C+ L   ++G+ VH+  FK  + +   IESALL +Y+KCG   +A ++F+ +   D V+W ++ISG  ++G  + AL++F  M  +   +KP+S     V  AC+           HG +++ GL
Sbjct:  329 VFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGL 507          

HSP 4 Score: 78.5666 bits (192), Expect = 2.442e-14
Identity = 45/157 (28.66%), Postives = 74/157 (47.13%), Query Frame = 1
Query:   25 DMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            ++V W  ++         E +L ++   +         + +  L +C+      FGRQ+H    K GL  D  + ++LL MY+KCG + EA  +F  + +     W A+++ YA++    +AL LF  M Q  V P+S T   V+  CS  GL   G
Sbjct:  236 NVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYG 392          

HSP 5 Score: 77.0258 bits (188), Expect = 7.106e-14
Identity = 57/203 (28.08%), Postives = 98/203 (48.28%), Query Frame = 1
Query:   22 RDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVL-VSCA-GLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISN-PDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS-----------HGGLVEEGLHH-------FQQMQEKFGLVPVMEH-YACI 564
            RD+  W +++  + +   ++E +  F +M      P+ F++S V+ V C  G    + G+Q+H    +  LDTD  +++AL+DMY K G   +A  +F  I +  + V W  +I G+   G+ E++L L+   +   VK  S +F   L ACS           H  +V+ GLH+          M  K G+V   E  ++C+
Sbjct:  131 RDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCV 333          

HSP 6 Score: 68.9366 bits (167), Expect = 1.935e-11
Identity = 45/157 (28.66%), Postives = 76/157 (48.41%), Query Frame = 1
Query:   49 VTAHSQCSEWEEALAIFSQMR-EEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFE-------RISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTF-LCVLFACSHGGLVEE 492
            + A  Q  E+ +AL ++S+      F  + FT  S+L +C+ L  L +G+ +H      G   D  I ++L++MY KCG +  AV +F+        +S  D   W ++I GY +    +  +  FRRM   GV+P++ +  + V   C  G    E
Sbjct:   31 IRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRRE 187          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP441_ARATH (Pentatricopeptide repeat-containing protein At5g61800 OS=Arabidopsis thaliana GN=PCMP-E8 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.597e-32
Identity = 70/188 (37.23%), Postives = 106/188 (56.38%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +FD M  RD+VSW +L++ ++Q +   EA+ +F +M      P+   I S L +CA       G+ +H    +  L  D  + + L+D YAKCG I  A+ IFE  S+    +W A+I+G A HG  E  +  FR+M   G+KP+ VTF+ VL  CSH GLV+E  + F QM+  + +   M+HY C+
Sbjct:  205 LFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCM 392          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP371_ARATH (Pentatricopeptide repeat-containing protein At5g08510 OS=Arabidopsis thaliana GN=PCMP-E20 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.597e-32
Identity = 71/190 (37.37%), Postives = 114/190 (60.00%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQM-REEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTV-SWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +FD M  +++ SWTT+++  SQ   + EAL +F  M +++   PN  T+ SVL +CA L  L+ GR++     + G   +  + +A ++MY+KCG I  A  +FE + N   + SW ++I   A HG  + AL LF +M + G KP++VTF+ +L AC HGG+V +G   F+ M+E   + P +EHY C+
Sbjct:  170 LFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCM 359          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP312_ARATH (Pentatricopeptide repeat-containing protein At4g14850 OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.597e-32
Identity = 72/190 (37.89%), Postives = 110/190 (57.89%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRM--EQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +F  MG ++ VSW +LV A+ Q  E E+A  ++ + R++    + F ISSVL +CAG+  L+ GR +H+   K  ++    + SAL+DMY KCG I ++   F+ +   + V+  ++I GYA  G  + AL LF  M     G  PN +TF+ +L ACS  G VE G+  F  M+  +G+ P  EHY+CI
Sbjct:  266 IFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCI 455          

HSP 2 Score: 88.9669 bits (219), Expect = 1.807e-17
Identity = 45/157 (28.66%), Postives = 79/157 (50.32%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471
            +FD + ER++ +W   ++         EA+  F + R  +  PN  T  + L +C+    L+ G Q+H L  ++G DTD  + + L+D Y KC  I  + +IF  +   + VSW ++++ Y Q+   E A  L+ R  +  V+ +      VL AC+
Sbjct:  165 LFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACA 321          

HSP 3 Score: 87.0409 bits (214), Expect = 6.867e-17
Identity = 49/150 (32.67%), Postives = 73/150 (48.67%), Query Frame = 1
Query:   22 RDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471
            R++VSWT+L++  +Q   +  AL  F +MR E   PN FT      + A L     G+Q+H+L  K G   D  +  +  DMY K     +A  +F+ I   +  +W A IS     G    A++ F    ++   PNS+TF   L ACS
Sbjct:   71 RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACS 220          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP277_ARATH (Pentatricopeptide repeat-containing protein At3g50420 OS=Arabidopsis thaliana GN=PCMP-E85 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.597e-32
Identity = 71/188 (37.77%), Postives = 108/188 (57.45%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            VFD M ERD+V WT ++  HS+    E A+  F +M  E+   + F++SSV+ +C+ +  L  G   H L  +TG D    +  AL+DMY K G    A  IF   SNPD   W +++  Y+QHG+ E AL  F ++ + G  P++VT+L +L ACSH G   +G   + QM+E+ G+    +HY+C+
Sbjct:  459 VFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQ-GIKAGFKHYSCM 645          

HSP 2 Score: 107.457 bits (267), Expect = 4.910e-23
Identity = 54/156 (34.62%), Postives = 87/156 (55.77%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGV-KPNSVTFLCVLFA 465
            +FD +  RD V+W T++    +  + E+ L  F  M      P QFT S VL  C+ L     G+ +H+    +    D  +++ALLDMY  CG++ EA  +F RI NP+ VSW +IISG +++G  E A+ ++RR+ ++   +P+  TF   + A
Sbjct:  256 IFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISA 411          

HSP 3 Score: 91.2781 bits (225), Expect = 3.641e-18
Identity = 52/161 (32.30%), Postives = 87/161 (54.04%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEE-ALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGG 480
            VFD+M  R++VS+  L +A+S+  ++   A  + + M  E   PN  T +S++  CA L  +  G  ++S   K G   +  +++++L MY+ CG++  A  IF+ ++N D V+W  +I G  ++   E+ L  FR M   GV P   T+  VL  CS  G
Sbjct:  154 VFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLG 314          

HSP 4 Score: 69.3218 bits (168), Expect = 1.482e-11
Identity = 43/166 (25.90%), Postives = 84/166 (50.60%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQM-REEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            VF R+   ++VSW ++++  S+    E+A+ ++ ++ R     P+++T S+ + + A       G+ +H    K G +    + + LL MY K      A  +F+ +   D V WT +I G+++ G SE A+Q F  M +   + +  +   V+ ACS   ++ +G
Sbjct:  357 VFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQG 522          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP167_ARATH (Pentatricopeptide repeat-containing protein At2g21090 OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.392e-32
Identity = 71/189 (37.57%), Postives = 107/189 (56.61%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNP-DTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +F  M E++ VSWT L+  + +      AL +F +M      P QFT SS L + A +  L  G+++H    +T +  +  + S+L+DMY+K G++  +  +F    +  D V W  +IS  AQHGL   AL++   M +  V+PN  T + +L ACSH GLVEEGL  F+ M  + G+VP  EHYAC+
Sbjct:  267 LFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACL 455          

HSP 2 Score: 99.7525 bits (247), Expect = 1.024e-20
Identity = 59/186 (31.72%), Postives = 84/186 (45.16%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPD-------------------------------TVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFA 465
            VFD M ERD+VSW T+V  ++Q     EAL  + + R      N+F+ + +L +C     L   RQ H      G  ++  +  +++D YAKCG +  A   F+ ++  D                                VSWTA+I+GY + G    AL LFR+M  LGVKP   TF   L A
Sbjct:  135 VFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCA 320          
The following BLAST results are available for this feature:
BLAST of CF504011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 212
Match NameE-valueIdentityDescription
PP323_ARATH1.989e-3237.04Pentatricopeptide repeat-containing protein At4g19... [more]
PP297_ARATH1.989e-3235.56Pentatricopeptide repeat-containing protein At4g01... [more]
PP223_ARATH1.989e-3235.64Putative pentatricopeptide repeat-containing prote... [more]
PP198_ARATH1.989e-3236.51Pentatricopeptide repeat-containing protein At2g41... [more]
PP197_ARATH1.989e-3235.48Pentatricopeptide repeat-containing protein At2g40... [more]
PP441_ARATH2.597e-3237.23Pentatricopeptide repeat-containing protein At5g61... [more]
PP371_ARATH2.597e-3237.37Pentatricopeptide repeat-containing protein At5g08... [more]
PP312_ARATH2.597e-3237.89Pentatricopeptide repeat-containing protein At4g14... [more]
PP277_ARATH2.597e-3237.77Pentatricopeptide repeat-containing protein At3g50... [more]
PP167_ARATH3.392e-3237.57Pentatricopeptide repeat-containing protein At2g21... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-499 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-12_C10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504011 ID=CF504011; Name=CF504011; organism=Citrus sinensis; type=EST; length=568bp
GTTTTTGACAGGATGGGGGAGAGAGATATGGTGTCTTGGACAACTCTTGT
GACTGCTCACTCTCAATGTTCTGAATGGGAGGAAGCACTTGCGATTTTTT
CCCAAATGAGGGAGGAAGAATTTAGTCCTAACCAGTTCACAATTTCCAGT
GTTCTTGTATCTTGTGCTGGCCTTTGTTTTCTAGATTTTGGTCGGCAAGT
TCATAGTCTTTGTTTCAAGACTGGGTTGGACACTGACAAGCGCATAGAAA
GTGCTTTGTTGGACATGTATGCCAAATGTGGCAATATAAGTGAGGCAGTG
ATGATATTTGAAAGGATTTCCAACCCTGATACTGTTTCATGGACAGCTAT
AATATCGGGTTATGCCCAGCACGGTCTCTCGGAAAATGCCCTTCAACTCT
TTAGAAGAATGGAACAGTTGGGTGTGAAGCCTAACTCTGTTACCTTTCTC
TGTGTTCTGTTTGCTTGCAGCCATGGAGGACTGGTAGAGGAAGGCCTGCA
CCATTTTCAACAAATGCAGGAAAAATTTGGTCTGGTGCCAGTGATGGAAC
ATTATGCTTGTATTGGTG
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