CF504011
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP253_ARATH (Putative pentatricopeptide repeat-containing protein At3g25060, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E96 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 4.585e-29 Identity = 68/188 (36.17%), Postives = 103/188 (54.79%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 VF RM + VSW +L++ +Q +A +M+ F P+ T+ VLV+C+ + L GR VH K + D+ +AL+DMY+KCG +S + IFE + D V W +IS Y HG + + LF +M + ++P+ TF +L A SH GLVE+G H F M K+ + P +HY C+ Sbjct: 274 VFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCL 460 HSP 2 Score: 117.087 bits (292), Expect = 6.196e-26 Identity = 59/165 (35.76%), Postives = 98/165 (59.39%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 +F +M +RD++ WTT+VT +Q + +A+ + +M+ E F ++ + +L + L GR VH ++TGL + +E++L+DMYAK G I A +F R+ VSW ++ISG+AQ+GL+ A + M+ LG +P+ VT + VL ACS G ++ G Sbjct: 173 LFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTG 337 HSP 3 Score: 86.6557 bits (213), Expect = 8.968e-17 Identity = 45/165 (27.27%), Postives = 86/165 (52.12%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 VFD + +R + + +++ +S+ +E L ++ QM E+ P+ T + + +C L+ G V G D + S++L++Y KCG + EA ++F +++ D + WT +++G+AQ G S A++ +R M+ G + V L +L A G + G Sbjct: 72 VFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMG 236
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP116_ARATH (Pentatricopeptide repeat-containing protein At1g71490 OS=Arabidopsis thaliana GN=PCMP-E67 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 4.585e-29 Identity = 64/189 (33.86%), Postives = 110/189 (58.20%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTD-KRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 VF + E + +W ++++ ++Q ++ EEA + +M F PN T++S+L CA + L G++ H + D + ++L+D+YAK G I A + + +S D V++T++I GY G AL LF+ M + G+KP+ VT + VL ACSH LV EG F +MQ ++G+ P ++H++C+ Sbjct: 337 VFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCM 525 HSP 2 Score: 89.3521 bits (220), Expect = 1.384e-17 Identity = 52/200 (26.00%), Postives = 89/200 (44.50%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQM---------------------------------REEEFSPNQFTISSV--LVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 +FDRM ERD VSW ++ ++ W EA +F +M R F + ++ + L +C+ + + G+++H L + D + + L+ MY+KC ++ A+++F + +W +IISGYAQ SE A L R M G +PNS+T +L C+ ++ G Sbjct: 201 LFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHG 400 HSP 3 Score: 81.6481 bits (200), Expect = 2.885e-15 Identity = 44/148 (29.73%), Postives = 77/148 (52.03%), Query Frame = 1 Query: 37 WTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGG 480 W L+ ++++ +EE +A + +M + P+ FT SVL +C + FGR VH + + + +AL+ MY + N+ A +F+R+ D VSW A+I+ YA G+ A +LF +M GV+ + +T+ + C G Sbjct: 112 WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTG 259
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PPR45_ARATH (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.069e-28 Identity = 60/188 (31.91%), Postives = 109/188 (57.98%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +F + ++++SWT+++ + EAL QM+ PN T+++ L +CA + L G+++H+ +TG+ D + +ALLDMY +CG ++ A F D SW +++GY++ G ++LF RM + V+P+ +TF+ +L CS +V +GL +F +M E +G+ P ++HYAC+ Sbjct: 455 IFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACV 639 HSP 2 Score: 111.694 bits (278), Expect = 2.603e-24 Identity = 57/166 (34.34%), Postives = 91/166 (54.82%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGL 498 +FDRM RD++SW +++ + + E L +F MR P+ T++SV+ +C L GR +H+ TG D + ++L MY G+ EA +F R+ D VSWT +ISGY + L + A+ +R M+Q VKP+ +T VL AC+ G ++ G+ Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGV 418 HSP 3 Score: 108.612 bits (270), Expect = 2.204e-23 Identity = 54/157 (34.39%), Postives = 92/157 (58.60%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMR-EEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFAC 468 VF +M ER++ SW LV +++ ++EA+ ++ +M P+ +T VL +C G+ L G++VH + G + D + +AL+ MY KCG++ A ++F+R+ D +SW A+ISGY ++G+ L+LF M L V P+ +T V+ AC Sbjct: 151 VFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307 HSP 4 Score: 100.138 bits (248), Expect = 7.838e-21 Identity = 52/160 (32.50%), Postives = 94/160 (58.75%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGG 480 +F RM +D+VSWTT+++ + ++A+ + M ++ P++ T+++VL +CA L LD G ++H L K L + + + L++MY+KC I +A+ IF I + +SWT+II+G + AL +F R ++ ++PN++T L AC+ G Sbjct: 354 LFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIG 512 HSP 5 Score: 68.9366 bits (167), Expect = 1.935e-11 Identity = 41/145 (28.28%), Postives = 77/145 (53.10%), Query Frame = 1 Query: 58 HSQCS--EWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQL-GVKPNSVTFLCVLFACSHGGL 483 H C+ + EEA+ + + M+E + ++ +++ C + G +V+S+ + + +A L M+ + GN+ +A +F ++S + SW ++ GYA+ G + A+ L+ RM + GVKP+ TF CVL C GG+ Sbjct: 67 HGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTC--GGI 209
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP309_ARATH (Pentatricopeptide repeat-containing protein At4g14170 OS=Arabidopsis thaliana GN=PCMP-E17 PE=2 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 5.069e-28 Identity = 68/188 (36.17%), Postives = 107/188 (56.91%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +FD M RD V +T + + Q E LA+F +M F+ + + S+L++C L L G+ VH C + + +A+ DMY KC + A +F +S D +SW+++I GY G + +LF M + G++PN+VTFL VL AC+HGGLVE+ +F+ MQE + +VP ++HYA + Sbjct: 191 LFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQE-YNIVPELKHYASV 377 HSP 2 Score: 83.9593 bits (206), Expect = 5.813e-16 Identity = 50/166 (30.12%), Postives = 83/166 (50.00%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQM-REEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 VF M R++ SW ++ S+ +++ +F +M RE P+ FT+ +L +C+ G +H LC K G + + SAL+ MY G + A +F+ + D+V +TA+ GY Q G + L +FR M G +SV + +L AC G ++ G Sbjct: 89 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHG 254
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP144_ARATH (Pentatricopeptide repeat-containing protein At2g02750 OS=Arabidopsis thaliana GN=PCMP-E22 PE=2 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 5.069e-28 Identity = 65/182 (35.71%), Postives = 102/182 (56.04%), Query Frame = 1 Query: 25 DMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNP--DTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 D +W +L++ SQ + EA F +M P+ ++S+L +C+ + L G+++H K + D + ++L+DMY KCG S A IF+R D V W +ISGY +HG E+A+++F + + V+P+ TF VL ACSH G VE+G F+ MQE++G P EH C+ Sbjct: 332 DSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCM 513 HSP 2 Score: 92.4337 bits (228), Expect = 1.634e-18 Identity = 48/174 (27.59%), Postives = 94/174 (54.02%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMRE-EEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNP-DTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQM 516 +F+++ + +V++ ++ + ++F+ MR+ PN T + + +CA L L +GRQ+H L K + + +AL+DMY+KC A ++F + + + +SW ++ISG +G E A++LF +++ G+KP+S T+ ++ S G V E F++M Sbjct: 186 MFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERM 359 HSP 3 Score: 77.411 bits (189), Expect = 5.441e-14 Identity = 45/158 (28.48%), Postives = 79/158 (50.00%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQL-GVKPNSVTFLCVLFACS 471 V D M ER + S V+ + +A +F R N T++SVL C + + G Q+H L K+G + + + ++L+ MY++CG A +FE++ + V++ A ISG ++G+ +F M + +PN VTF+ + AC+ Sbjct: 88 VLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDI---EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACA 242
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP324_ARATH (Pentatricopeptide repeat-containing protein At4g19220, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E2 PE=2 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 1.926e-27 Identity = 58/185 (31.35%), Postives = 102/185 (55.14%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLG-VKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEH 552 VF + + ++ SW +++A SQ E +F ++ E PN+ T +L + L +G Q H + G + + +AL+DMY+ CG + + +F +W ++IS + HG+ E A++LF+ + ++PN +F+ +L ACSH G ++EGL +++QM+EKFG+ PV EH Sbjct: 657 VFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLE---PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEH 838 HSP 2 Score: 94.3597 bits (233), Expect = 4.301e-19 Identity = 51/160 (31.87%), Postives = 93/160 (58.13%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQ---VHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471 +FD + E+D++ W +++TA +Q + A+ +F +M + N+F +++L++ + L L R+ +H L +TGL D + +AL+++YAK N+S A +F + + D VSW I++ +G +LQ F+ M G + ++VTF CV+ ACS Sbjct: 144 LFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKG---NEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACS 300 HSP 3 Score: 83.9593 bits (206), Expect = 5.813e-16 Identity = 46/168 (27.38%), Postives = 83/168 (49.40%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIE--SALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLG-VKPNSVTFLCVLFACSHGGLVEEG 495 VF M RD+VSW T++T ++L F M + T S V+ +C+ + L G +H L K+G + + ++++ MY+KCG+ A +FE + D +S AI++G+A +G+ E A + +M+ + ++P+ T + + C EG Sbjct: 245 VFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREG 412 HSP 4 Score: 83.1889 bits (204), Expect = 9.916e-16 Identity = 46/160 (28.75%), Postives = 83/160 (51.88%), Query Frame = 1 Query: 22 RDMVSWTTLVTAHSQCSEWEEALAIFSQM-REEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGL 498 RD+ SW ++++ + E+L F M RE + + T+ + + L + GR H L K+ + D ++++ L+ MY +C +I AV +F IS+P+ SW +IS +Q+ QLFR ++ ++PN +TF+ +L A + G G+ Sbjct: 562 RDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK---LEPNEITFVGLLSASTQLGSTSYGM 718 HSP 5 Score: 78.9518 bits (193), Expect = 1.870e-14 Identity = 46/160 (28.75%), Postives = 87/160 (54.37%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMRE-EEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDK-RIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRM--EQLGVKPNSVTFLCVLFAC 468 VF+ + RD++S ++ + +EEA I +QM+ ++ P+ T+ S+ C L F GR VH + + + + ++++DMY KCG ++A ++F+ ++ D VSW ++IS ++Q+G + A LF+ + E K + T L +L +C Sbjct: 348 VFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSC 507 HSP 6 Score: 77.411 bits (189), Expect = 5.441e-14 Identity = 51/170 (30.00%), Postives = 92/170 (54.12%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVL---VSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNP-DTVSWTAIISGYAQHGLSENALQLFRRMEQLG-VKPNSVTFLCVLFACSHGGLVEEG 495 +F RD+VSW ++++A SQ +A +F ++ E+S ++F++S+VL SC L FG+ VH K G + +++++MY C +++ A + E +S D SW ++ISG A G +L+ F+ M + G ++ + +T L + A + GLV +G Sbjct: 451 LFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEV-VSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGFGDNMLSANSVINMYIGCRDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQG 619
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP119_ARATH (Putative pentatricopeptide repeat-containing protein At1g74400 OS=Arabidopsis thaliana GN=PCMP-E68 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.926e-27 Identity = 65/197 (32.99%), Postives = 112/197 (56.85%), Query Frame = 1 Query: 1 VFDRMGER-DMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTG--LDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLG------VKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 VFD E+ ++V WT +++A+++ EA+ +F +M E+ + ++ L +CA L + G +++S K L D + ++LL+MY K G +A +F+ D ++T++I GYA +G ++ +L+LF++M+ + + PN VTF+ VL ACSH GLVEEG HF+ M + L P H+ C+ Sbjct: 122 VFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCM 318
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP243_ARATH (Pentatricopeptide repeat-containing protein At3g18970 OS=Arabidopsis thaliana GN=PCMP-E93 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 7.319e-27 Identity = 69/199 (34.67%), Postives = 106/199 (53.27%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEE-------ALAIFSQMR--EEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGL--DTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 VFD M ER V+W ++ + CS ++ A+ +F + P T+ VL + + L+ G VH K G + D I +AL+DMY+KCG ++ A +FE + + +WT++ +G A +G L RM + G+KPN +TF +L A H GLVEEG+ F+ M+ +FG+ PV+EHY CI Sbjct: 169 VFDEMPERTSVTWNAMIGGY--CSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCI 365 HSP 2 Score: 78.1814 bits (191), Expect = 3.190e-14 Identity = 66/198 (33.33%), Postives = 96/198 (48.48%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEE--FSPNQFTISSVLVSCA---GLCFLDFGRQVHSLCFKTG-LDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSEN-----ALQLFRRME--QLGVKPNSVTFLCVLFACSHGGLVEEG--LHHFQQMQEKFGLVPVME 549 VF R G D + TL+ +CS+ E+++ IF+ + N+ T VL +CA L GR VH + K G L + I + LL YAK G++ A +F+ + +V+W A+I GY H N A+ LFRR GV+P T +CVL A S GL+E G +H + EK G P ++ Sbjct: 66 VFPRFGHPDKFLFNTLL----KCSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGY---IEKLGFTPEVD 256
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP191_ARATH (Pentatricopeptide repeat-containing protein At2g37310 OS=Arabidopsis thaliana GN=PCMP-E49 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 7.319e-27 Identity = 62/188 (32.98%), Postives = 102/188 (54.26%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +F M + +W +++ Q + EE + F +M PN T+SS+L S L G+++H+ + G D + + ++++D YAK G + A +F+ + ++WTAII+ YA HG S++A LF +M+ LG KP+ VT VL A +H G + H F M K+ + P +EHYAC+ Sbjct: 322 LFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACM 509 HSP 2 Score: 109.768 bits (273), Expect = 9.893e-24 Identity = 58/173 (33.53%), Postives = 97/173 (56.07%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMRE-EEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQM 516 VFD M ERD+VSW ++++ +SQ +E+ ++ M +F PN T+ SV +C L FG +VH + + D + +A++ YAKCG++ A +F+ +S D+V++ AIISGY HGL + A+ LF ME +G+ T+ ++ EE ++ F++M Sbjct: 189 VFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLS----TWNAMISGLMQNNHHEEVINSFREM 357 HSP 3 Score: 87.8113 bits (216), Expect = 4.026e-17 Identity = 56/184 (30.43%), Postives = 92/184 (50.00%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIF------SQMREEEFSPNQFTISSVLVSCAGLCFLDFG---RQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLG-VKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQE 522 VFD + R+ S+ L+ A++ + +A ++F S + P+ +IS VL + +G G RQVH + G D+D + + ++ Y KC NI A +F+ +S D VSW ++ISGY+Q G E+ ++++ M KPN VT + V AC + GL ++M E Sbjct: 79 VFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIE 262
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PPR71_ARATH (Pentatricopeptide repeat-containing protein At1g34160 OS=Arabidopsis thaliana GN=PCMP-H68 PE=2 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 3.633e-26 Identity = 65/190 (34.21%), Postives = 105/190 (55.26%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIES-ALLDMYAKCGNISEAVMIFERISNPDTV-SWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +FD M RD+ SW L+ + EA+ ++ +M E ++ T+ + L +C+ L + G + G D I S A +DMY+KCG + +A +FE+ + +V +W +I+G+A HG + AL++F ++E G+KP+ V++L L AC H GLVE GL F M K G+ M+HY C+ Sbjct: 166 LFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFH-----GYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCV 349 HSP 2 Score: 78.1814 bits (191), Expect = 3.190e-14 Identity = 47/163 (28.83%), Postives = 79/163 (48.47%), Query Frame = 1 Query: 37 WTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQF------TISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHF 507 W ++ + S A + + M ++ S + T S L +CA Q+H + GL D + + LLD Y+K G++ A +F+ + D SW A+I+G + A++L++RME G++ + VT + L ACSH G V+EG + F Sbjct: 71 WNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIF 233 The following BLAST results are available for this feature:
BLAST of CF504011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 212
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504011 ID=CF504011; Name=CF504011; organism=Citrus sinensis; type=EST; length=568bpback to top |