CF504011

Overview
NameCF504011
Unique NameCF504011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length568
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP253_ARATH (Putative pentatricopeptide repeat-containing protein At3g25060, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E96 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 4.585e-29
Identity = 68/188 (36.17%), Postives = 103/188 (54.79%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            VF RM  +  VSW +L++  +Q     +A     +M+   F P+  T+  VLV+C+ +  L  GR VH    K  +  D+   +AL+DMY+KCG +S +  IFE +   D V W  +IS Y  HG  +  + LF +M +  ++P+  TF  +L A SH GLVE+G H F  M  K+ + P  +HY C+
Sbjct:  274 VFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCL 460          

HSP 2 Score: 117.087 bits (292), Expect = 6.196e-26
Identity = 59/165 (35.76%), Postives = 98/165 (59.39%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            +F +M +RD++ WTT+VT  +Q  +  +A+  + +M+ E F  ++  +  +L +   L     GR VH   ++TGL  +  +E++L+DMYAK G I  A  +F R+     VSW ++ISG+AQ+GL+  A +    M+ LG +P+ VT + VL ACS  G ++ G
Sbjct:  173 LFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTG 337          

HSP 3 Score: 86.6557 bits (213), Expect = 8.968e-17
Identity = 45/165 (27.27%), Postives = 86/165 (52.12%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            VFD + +R +  + +++  +S+    +E L ++ QM  E+  P+  T +  + +C     L+ G  V       G   D  + S++L++Y KCG + EA ++F +++  D + WT +++G+AQ G S  A++ +R M+  G   + V  L +L A    G  + G
Sbjct:   72 VFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMG 236          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP116_ARATH (Pentatricopeptide repeat-containing protein At1g71490 OS=Arabidopsis thaliana GN=PCMP-E67 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 4.585e-29
Identity = 64/189 (33.86%), Postives = 110/189 (58.20%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTD-KRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            VF +  E  + +W ++++ ++Q ++ EEA  +  +M    F PN  T++S+L  CA +  L  G++ H    +     D   + ++L+D+YAK G I  A  + + +S  D V++T++I GY   G    AL LF+ M + G+KP+ VT + VL ACSH  LV EG   F +MQ ++G+ P ++H++C+
Sbjct:  337 VFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCM 525          

HSP 2 Score: 89.3521 bits (220), Expect = 1.384e-17
Identity = 52/200 (26.00%), Postives = 89/200 (44.50%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQM---------------------------------REEEFSPNQFTISSV--LVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            +FDRM ERD VSW  ++  ++    W EA  +F +M                                 R   F  +   ++ +  L +C+ +  +  G+++H L   +  D    + + L+ MY+KC ++  A+++F +       +W +IISGYAQ   SE A  L R M   G +PNS+T   +L  C+    ++ G
Sbjct:  201 LFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHG 400          

HSP 3 Score: 81.6481 bits (200), Expect = 2.885e-15
Identity = 44/148 (29.73%), Postives = 77/148 (52.03%), Query Frame = 1
Query:   37 WTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGG 480
            W  L+ ++++   +EE +A + +M  +   P+ FT  SVL +C     + FGR VH     +   +   + +AL+ MY +  N+  A  +F+R+   D VSW A+I+ YA  G+   A +LF +M   GV+ + +T+  +   C   G
Sbjct:  112 WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTG 259          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PPR45_ARATH (Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 5.069e-28
Identity = 60/188 (31.91%), Postives = 109/188 (57.98%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +F  +  ++++SWT+++      +   EAL    QM+     PN  T+++ L +CA +  L  G+++H+   +TG+  D  + +ALLDMY +CG ++ A   F      D  SW  +++GY++ G     ++LF RM +  V+P+ +TF+ +L  CS   +V +GL +F +M E +G+ P ++HYAC+
Sbjct:  455 IFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACV 639          

HSP 2 Score: 111.694 bits (278), Expect = 2.603e-24
Identity = 57/166 (34.34%), Postives = 91/166 (54.82%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGL 498
            +FDRM  RD++SW  +++ + +     E L +F  MR     P+  T++SV+ +C  L     GR +H+    TG   D  + ++L  MY   G+  EA  +F R+   D VSWT +ISGY  + L + A+  +R M+Q  VKP+ +T   VL AC+  G ++ G+
Sbjct:  253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGV 418          

HSP 3 Score: 108.612 bits (270), Expect = 2.204e-23
Identity = 54/157 (34.39%), Postives = 92/157 (58.60%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMR-EEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFAC 468
            VF +M ER++ SW  LV  +++   ++EA+ ++ +M       P+ +T   VL +C G+  L  G++VH    + G + D  + +AL+ MY KCG++  A ++F+R+   D +SW A+ISGY ++G+    L+LF  M  L V P+ +T   V+ AC
Sbjct:  151 VFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307          

HSP 4 Score: 100.138 bits (248), Expect = 7.838e-21
Identity = 52/160 (32.50%), Postives = 94/160 (58.75%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGG 480
            +F RM  +D+VSWTT+++ +      ++A+  +  M ++   P++ T+++VL +CA L  LD G ++H L  K  L +   + + L++MY+KC  I +A+ IF  I   + +SWT+II+G   +     AL +F R  ++ ++PN++T    L AC+  G
Sbjct:  354 LFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IFLRQMKMTLQPNAITLTAALAACARIG 512          

HSP 5 Score: 68.9366 bits (167), Expect = 1.935e-11
Identity = 41/145 (28.28%), Postives = 77/145 (53.10%), Query Frame = 1
Query:   58 HSQCS--EWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQL-GVKPNSVTFLCVLFACSHGGL 483
            H  C+  + EEA+ + + M+E   + ++    +++  C      + G +V+S+   +       + +A L M+ + GN+ +A  +F ++S  +  SW  ++ GYA+ G  + A+ L+ RM  + GVKP+  TF CVL  C  GG+
Sbjct:   67 HGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTC--GGI 209          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP309_ARATH (Pentatricopeptide repeat-containing protein At4g14170 OS=Arabidopsis thaliana GN=PCMP-E17 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 5.069e-28
Identity = 68/188 (36.17%), Postives = 107/188 (56.91%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +FD M  RD V +T +   + Q  E    LA+F +M    F+ +   + S+L++C  L  L  G+ VH  C +        + +A+ DMY KC  +  A  +F  +S  D +SW+++I GY   G    + +LF  M + G++PN+VTFL VL AC+HGGLVE+   +F+ MQE + +VP ++HYA +
Sbjct:  191 LFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQE-YNIVPELKHYASV 377          

HSP 2 Score: 83.9593 bits (206), Expect = 5.813e-16
Identity = 50/166 (30.12%), Postives = 83/166 (50.00%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQM-REEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            VF  M  R++ SW  ++   S+     +++ +F +M RE    P+ FT+  +L +C+       G  +H LC K G  +   + SAL+ MY   G +  A  +F+ +   D+V +TA+  GY Q G +   L +FR M   G   +SV  + +L AC   G ++ G
Sbjct:   89 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHG 254          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP144_ARATH (Pentatricopeptide repeat-containing protein At2g02750 OS=Arabidopsis thaliana GN=PCMP-E22 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 5.069e-28
Identity = 65/182 (35.71%), Postives = 102/182 (56.04%), Query Frame = 1
Query:   25 DMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNP--DTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            D  +W +L++  SQ  +  EA   F +M      P+   ++S+L +C+ +  L  G+++H    K   + D  + ++L+DMY KCG  S A  IF+R      D V W  +ISGY +HG  E+A+++F  + +  V+P+  TF  VL ACSH G VE+G   F+ MQE++G  P  EH  C+
Sbjct:  332 DSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCM 513          

HSP 2 Score: 92.4337 bits (228), Expect = 1.634e-18
Identity = 48/174 (27.59%), Postives = 94/174 (54.02%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMRE-EEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNP-DTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQM 516
            +F+++  + +V++   ++   +        ++F+ MR+     PN  T  + + +CA L  L +GRQ+H L  K     +  + +AL+DMY+KC     A ++F  + +  + +SW ++ISG   +G  E A++LF +++  G+KP+S T+  ++   S  G V E    F++M
Sbjct:  186 MFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERM 359          

HSP 3 Score: 77.411 bits (189), Expect = 5.441e-14
Identity = 45/158 (28.48%), Postives = 79/158 (50.00%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQL-GVKPNSVTFLCVLFACS 471
            V D M ER + S    V+   +     +A  +F   R      N  T++SVL  C  +   + G Q+H L  K+G + +  + ++L+ MY++CG    A  +FE++ +   V++ A ISG  ++G+      +F  M +    +PN VTF+  + AC+
Sbjct:   88 VLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDI---EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACA 242          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP324_ARATH (Pentatricopeptide repeat-containing protein At4g19220, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E2 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 1.926e-27
Identity = 58/185 (31.35%), Postives = 102/185 (55.14%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLG-VKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEH 552
            VF  + + ++ SW  +++A SQ     E   +F  ++ E   PN+ T   +L +   L    +G Q H    + G   +  + +AL+DMY+ CG +   + +F         +W ++IS +  HG+ E A++LF+ +     ++PN  +F+ +L ACSH G ++EGL +++QM+EKFG+ PV EH
Sbjct:  657 VFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLE---PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEH 838          

HSP 2 Score: 94.3597 bits (233), Expect = 4.301e-19
Identity = 51/160 (31.87%), Postives = 93/160 (58.13%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQ---VHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471
            +FD + E+D++ W +++TA +Q   +  A+ +F +M  +    N+F  +++L++ + L  L   R+   +H L  +TGL  D  + +AL+++YAK  N+S A  +F  + + D VSW  I++    +G    +LQ F+ M   G + ++VTF CV+ ACS
Sbjct:  144 LFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKG---NEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACS 300          

HSP 3 Score: 83.9593 bits (206), Expect = 5.813e-16
Identity = 46/168 (27.38%), Postives = 83/168 (49.40%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIE--SALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLG-VKPNSVTFLCVLFACSHGGLVEEG 495
            VF  M  RD+VSW T++T         ++L  F  M       +  T S V+ +C+ +  L  G  +H L  K+G   +  +   ++++ MY+KCG+   A  +FE +   D +S  AI++G+A +G+ E A  +  +M+ +  ++P+  T + +   C       EG
Sbjct:  245 VFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREG 412          

HSP 4 Score: 83.1889 bits (204), Expect = 9.916e-16
Identity = 46/160 (28.75%), Postives = 83/160 (51.88%), Query Frame = 1
Query:   22 RDMVSWTTLVTAHSQCSEWEEALAIFSQM-REEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGL 498
            RD+ SW ++++  +      E+L  F  M RE +   +  T+   + +   L  +  GR  H L  K+  + D ++++ L+ MY +C +I  AV +F  IS+P+  SW  +IS  +Q+       QLFR ++   ++PN +TF+ +L A +  G    G+
Sbjct:  562 RDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK---LEPNEITFVGLLSASTQLGSTSYGM 718          

HSP 5 Score: 78.9518 bits (193), Expect = 1.870e-14
Identity = 46/160 (28.75%), Postives = 87/160 (54.37%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMRE-EEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDK-RIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRM--EQLGVKPNSVTFLCVLFAC 468
            VF+ +  RD++S   ++   +    +EEA  I +QM+  ++  P+  T+ S+   C  L F   GR VH    +  + +    + ++++DMY KCG  ++A ++F+  ++ D VSW ++IS ++Q+G +  A  LF+ +  E    K +  T L +L +C
Sbjct:  348 VFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSC 507          

HSP 6 Score: 77.411 bits (189), Expect = 5.441e-14
Identity = 51/170 (30.00%), Postives = 92/170 (54.12%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVL---VSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNP-DTVSWTAIISGYAQHGLSENALQLFRRMEQLG-VKPNSVTFLCVLFACSHGGLVEEG 495
            +F     RD+VSW ++++A SQ     +A  +F ++   E+S ++F++S+VL    SC     L FG+ VH    K G   +    +++++MY  C +++ A +  E +S   D  SW ++ISG A  G    +L+ F+ M + G ++ + +T L  + A  + GLV +G
Sbjct:  451 LFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEV-VSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGFGDNMLSANSVINMYIGCRDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQG 619          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP119_ARATH (Putative pentatricopeptide repeat-containing protein At1g74400 OS=Arabidopsis thaliana GN=PCMP-E68 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.926e-27
Identity = 65/197 (32.99%), Postives = 112/197 (56.85%), Query Frame = 1
Query:    1 VFDRMGER-DMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTG--LDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLG------VKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            VFD   E+ ++V WT +++A+++     EA+ +F +M  E+   +   ++  L +CA L  +  G +++S   K    L  D  + ++LL+MY K G   +A  +F+     D  ++T++I GYA +G ++ +L+LF++M+ +       + PN VTF+ VL ACSH GLVEEG  HF+ M   + L P   H+ C+
Sbjct:  122 VFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCM 318          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP243_ARATH (Pentatricopeptide repeat-containing protein At3g18970 OS=Arabidopsis thaliana GN=PCMP-E93 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 7.319e-27
Identity = 69/199 (34.67%), Postives = 106/199 (53.27%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEE-------ALAIFSQMR--EEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGL--DTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            VFD M ER  V+W  ++  +  CS  ++       A+ +F +         P   T+  VL + +    L+ G  VH    K G   + D  I +AL+DMY+KCG ++ A  +FE +   +  +WT++ +G A +G       L  RM + G+KPN +TF  +L A  H GLVEEG+  F+ M+ +FG+ PV+EHY CI
Sbjct:  169 VFDEMPERTSVTWNAMIGGY--CSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCI 365          

HSP 2 Score: 78.1814 bits (191), Expect = 3.190e-14
Identity = 66/198 (33.33%), Postives = 96/198 (48.48%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEE--FSPNQFTISSVLVSCA---GLCFLDFGRQVHSLCFKTG-LDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSEN-----ALQLFRRME--QLGVKPNSVTFLCVLFACSHGGLVEEG--LHHFQQMQEKFGLVPVME 549
            VF R G  D   + TL+    +CS+ E+++ IF+    +      N+ T   VL +CA       L  GR VH +  K G L   + I + LL  YAK G++  A  +F+ +    +V+W A+I GY  H    N     A+ LFRR      GV+P   T +CVL A S  GL+E G  +H +    EK G  P ++
Sbjct:   66 VFPRFGHPDKFLFNTLL----KCSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGY---IEKLGFTPEVD 256          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP191_ARATH (Pentatricopeptide repeat-containing protein At2g37310 OS=Arabidopsis thaliana GN=PCMP-E49 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 7.319e-27
Identity = 62/188 (32.98%), Postives = 102/188 (54.26%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +F  M    + +W  +++   Q +  EE +  F +M      PN  T+SS+L S      L  G+++H+   + G D +  + ++++D YAK G +  A  +F+   +   ++WTAII+ YA HG S++A  LF +M+ LG KP+ VT   VL A +H G  +   H F  M  K+ + P +EHYAC+
Sbjct:  322 LFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACM 509          

HSP 2 Score: 109.768 bits (273), Expect = 9.893e-24
Identity = 58/173 (33.53%), Postives = 97/173 (56.07%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMRE-EEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQM 516
            VFD M ERD+VSW ++++ +SQ   +E+   ++  M    +F PN  T+ SV  +C     L FG +VH    +  +  D  + +A++  YAKCG++  A  +F+ +S  D+V++ AIISGY  HGL + A+ LF  ME +G+     T+  ++         EE ++ F++M
Sbjct:  189 VFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLS----TWNAMISGLMQNNHHEEVINSFREM 357          

HSP 3 Score: 87.8113 bits (216), Expect = 4.026e-17
Identity = 56/184 (30.43%), Postives = 92/184 (50.00%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIF------SQMREEEFSPNQFTISSVLVSCAGLCFLDFG---RQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLG-VKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQE 522
            VFD +  R+  S+  L+ A++    + +A ++F      S    +   P+  +IS VL + +G      G   RQVH    + G D+D  + + ++  Y KC NI  A  +F+ +S  D VSW ++ISGY+Q G  E+  ++++ M      KPN VT + V  AC     +  GL   ++M E
Sbjct:   79 VFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIE 262          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PPR71_ARATH (Pentatricopeptide repeat-containing protein At1g34160 OS=Arabidopsis thaliana GN=PCMP-H68 PE=2 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 3.633e-26
Identity = 65/190 (34.21%), Postives = 105/190 (55.26%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIES-ALLDMYAKCGNISEAVMIFERISNPDTV-SWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +FD M  RD+ SW  L+      +   EA+ ++ +M  E    ++ T+ + L +C+ L  +  G  +       G   D  I S A +DMY+KCG + +A  +FE+ +   +V +W  +I+G+A HG +  AL++F ++E  G+KP+ V++L  L AC H GLVE GL  F  M  K G+   M+HY C+
Sbjct:  166 LFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFH-----GYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCV 349          

HSP 2 Score: 78.1814 bits (191), Expect = 3.190e-14
Identity = 47/163 (28.83%), Postives = 79/163 (48.47%), Query Frame = 1
Query:   37 WTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQF------TISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHF 507
            W  ++   +  S    A + +  M ++  S +        T S  L +CA         Q+H    + GL  D  + + LLD Y+K G++  A  +F+ +   D  SW A+I+G      +  A++L++RME  G++ + VT +  L ACSH G V+EG + F
Sbjct:   71 WNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIF 233          
The following BLAST results are available for this feature:
BLAST of CF504011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 212
Match NameE-valueIdentityDescription
PP253_ARATH4.585e-2936.17Putative pentatricopeptide repeat-containing prote... [more]
PP116_ARATH4.585e-2933.86Pentatricopeptide repeat-containing protein At1g71... [more]
PPR45_ARATH5.069e-2831.91Pentatricopeptide repeat-containing protein At1g15... [more]
PP309_ARATH5.069e-2836.17Pentatricopeptide repeat-containing protein At4g14... [more]
PP144_ARATH5.069e-2835.71Pentatricopeptide repeat-containing protein At2g02... [more]
PP324_ARATH1.926e-2731.35Pentatricopeptide repeat-containing protein At4g19... [more]
PP119_ARATH1.926e-2732.99Putative pentatricopeptide repeat-containing prote... [more]
PP243_ARATH7.319e-2734.67Pentatricopeptide repeat-containing protein At3g18... [more]
PP191_ARATH7.319e-2732.98Pentatricopeptide repeat-containing protein At2g37... [more]
PPR71_ARATH3.633e-2634.21Pentatricopeptide repeat-containing protein At1g34... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-499 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-12_C10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504011 ID=CF504011; Name=CF504011; organism=Citrus sinensis; type=EST; length=568bp
GTTTTTGACAGGATGGGGGAGAGAGATATGGTGTCTTGGACAACTCTTGT
GACTGCTCACTCTCAATGTTCTGAATGGGAGGAAGCACTTGCGATTTTTT
CCCAAATGAGGGAGGAAGAATTTAGTCCTAACCAGTTCACAATTTCCAGT
GTTCTTGTATCTTGTGCTGGCCTTTGTTTTCTAGATTTTGGTCGGCAAGT
TCATAGTCTTTGTTTCAAGACTGGGTTGGACACTGACAAGCGCATAGAAA
GTGCTTTGTTGGACATGTATGCCAAATGTGGCAATATAAGTGAGGCAGTG
ATGATATTTGAAAGGATTTCCAACCCTGATACTGTTTCATGGACAGCTAT
AATATCGGGTTATGCCCAGCACGGTCTCTCGGAAAATGCCCTTCAACTCT
TTAGAAGAATGGAACAGTTGGGTGTGAAGCCTAACTCTGTTACCTTTCTC
TGTGTTCTGTTTGCTTGCAGCCATGGAGGACTGGTAGAGGAAGGCCTGCA
CCATTTTCAACAAATGCAGGAAAAATTTGGTCTGGTGCCAGTGATGGAAC
ATTATGCTTGTATTGGTG
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