CF504011
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP145_ARATH (Pentatricopeptide repeat-containing protein At2g02980 OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2) HSP 1 Score: 161.384 bits (407), Expect = 2.865e-39 Identity = 78/185 (42.16%), Postives = 121/185 (65.41%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHY 555 VFDR+ E +V + ++T +++ + EAL++F +M+ + PN+ T+ SVL SCA L LD G+ +H K ++ +AL+DM+AKCG++ +AV IFE++ DT +W+A+I YA HG +E ++ +F RM V+P+ +TFL +L ACSH G VEEG +F QM KFG+VP ++HY Sbjct: 186 VFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHY 370 HSP 2 Score: 108.612 bits (270), Expect = 2.204e-23 Identity = 56/165 (33.94%), Postives = 96/165 (58.18%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 +F+ M E D+V + ++ +S+ + E ++F ++ E+ P+ +T S+L +CA L+ GRQ+H L K GLD + + L++MY +C ++ A +F+RI P V + A+I+GYA+ AL LFR M+ +KPN +T L VL +C+ G ++ G Sbjct: 85 LFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLG 249
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP353_ARATH (Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana GN=PCMP-H5 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 4.887e-39 Identity = 76/188 (40.43%), Postives = 115/188 (61.17%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +FD++ E+D+VSWT+++ + + S W E ++FS++ PN++T + VL +CA L + G+QVH + G D S+L+DMY KCGNI A + + PD VSWT++I G AQ+G + AL+ F + + G KP+ VTF+ VL AC+H GLVE+GL F + EK L +HY C+ Sbjct: 275 IFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCL 462 HSP 2 Score: 111.309 bits (277), Expect = 3.400e-24 Identity = 60/158 (37.97%), Postives = 91/158 (57.59%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFS-PNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471 +FD M E+D SWT +VT + + + EEAL ++S M+ S PN FT+S + + A + + G+++H + GLD+D+ + S+L+DMY KCG I EA IF++I D VSWT++I Y + LF + +PN TF VL AC+ Sbjct: 173 LFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACA 330
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP311_ARATH (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 4.887e-39 Identity = 74/188 (39.36%), Postives = 121/188 (64.36%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +FD+ ++D+V WTT+++A+ + +EAL +F +M P+ ++ SV+ +CA L LD + VHS GL+++ I +AL++MYAKCG + +FE++ + VSW+++I+ + HG + +AL LF RM+Q V+PN VTF+ VL+ CSH GLVEEG F M +++ + P +EHY C+ Sbjct: 300 IFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCM 487 HSP 2 Score: 92.8189 bits (229), Expect = 1.251e-18 Identity = 47/195 (24.10%), Postives = 94/195 (48.21%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYA-------------------------------KCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEE 492 VFD M RD+V+W T++ + + +EA +F +M++ P++ + +++ +C + + R ++ + + D + +AL+ MYA KCG + +A +IF++ D V WT +IS Y + + AL++F M G+KP+ V+ V+ AC++ G++++ Sbjct: 168 VFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDK 362 HSP 3 Score: 78.9518 bits (193), Expect = 1.870e-14 Identity = 40/140 (28.57%), Postives = 72/140 (51.43%), Query Frame = 1 Query: 61 SQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGG 480 S+ SE + + ++R +QF+ +L + + + L G ++H + FK D +E+ +DMYA CG I+ A +F+ +S+ D V+W +I Y + GL + A +LF M+ V P+ + ++ AC G Sbjct: 87 SRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTG 226
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 1.089e-38 Identity = 76/199 (38.19%), Postives = 115/199 (57.79%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEE-----------FSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +F +M +RD+V+W T++T + E+AL + +M+ E PN T+ ++L SCA L L G+++H+ K L TD + SAL+DMYAKCG + + +F++I + ++W II Y HG + A+ L R M GVKPN VTF+ V ACSH G+V+EGL F M+ +G+ P +HYAC+ Sbjct: 462 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACV 660 HSP 2 Score: 99.7525 bits (247), Expect = 1.024e-20 Identity = 56/168 (33.33%), Postives = 90/168 (53.57%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCF---LDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 VFDR+ ER+ VSW +L+++ +WE AL F M +E P+ FT+ SV+ +C+ L L G+QVH+ + G + + I + L+ MY K G ++ + ++ D V+W ++S Q+ AL+ R M GV+P+ T VL ACSH ++ G Sbjct: 155 VFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTG 321 HSP 3 Score: 98.9821 bits (245), Expect = 1.746e-20 Identity = 64/192 (33.33%), Postives = 105/192 (54.69%), Query Frame = 1 Query: 16 GERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTG-LDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQ-LGVKPNSVTFLCVLFACSHGGLV--EEGLHHFQQM----QEKFGLVPVMEHYACIG 567 G RD+V+W T++++ Q + EAL +M E P++FTISSVL +C+ L L G+++H+ K G LD + + SAL+DMY C + +F+ + + W A+I+GY+Q+ + AL LF ME+ G+ NS T V+ AC G +E +H F +++F +M+ Y+ +G Sbjct: 263 GGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLG 454 HSP 4 Score: 92.0485 bits (227), Expect = 2.135e-18 Identity = 52/169 (30.77%), Postives = 87/169 (51.48%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEE-FSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQL-----------GVKPNSVTFLCVLFACS 471 VFD M +R + W ++ +SQ +EAL +F M E N T++ V+ +C +H K GLD D+ +++ L+DMY++ G I A+ IF ++ + D V+W +I+GY E+AL L +M+ L +KPNS+T + +L +C+ Sbjct: 360 VFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCA 528 HSP 5 Score: 78.9518 bits (193), Expect = 1.870e-14 Identity = 43/147 (29.25%), Postives = 77/147 (52.38%), Query Frame = 1 Query: 37 WTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDK-RIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSH 474 W L+ + + + EA+ + M P+ + ++L + A L ++ G+Q+H+ +K G D + + L+++Y KCG+ +F+RIS + VSW ++IS E AL+ FR M V+P+S T + V+ ACS+ Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 211
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP212_ARATH (Pentatricopeptide repeat-containing protein At3g04750, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E81 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.089e-38 Identity = 83/190 (43.68%), Postives = 114/190 (60.00%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQ--CSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 VFD+M +RD+VSW +L+ +S+ C + + E+ P++ T+ S++ A L GR VH L + L D + SAL+DMY KCG I A M+F+ + D WT++I+G A HG + ALQLF RM++ GV PN+VT L VL ACSH GLVEEGLH F M++KFG P EHY + Sbjct: 322 VFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSL 511 HSP 2 Score: 71.2478 bits (173), Expect = 3.899e-12 Identity = 49/200 (24.50%), Postives = 94/200 (47.00%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTG--LDTDKRIESALLDMYAKC-------------------------------GNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENAL-QLFRRMEQL-GVKPNSVTFLCVLFACSHGGLVEEG 495 VF RM D+ S+ ++ +++ EAL ++ +M + P+++T+ S+LV C L + G+ VH + G ++ + +ALLDMY KC G++ A +F+++ D VSW +++ GY++ G + + +LF M + VKP+ VT + ++ ++ G + G Sbjct: 188 VFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHG 387 HSP 3 Score: 69.707 bits (169), Expect = 1.134e-11 Identity = 43/147 (29.25%), Postives = 76/147 (51.70%), Query Frame = 1 Query: 37 WTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTG-LDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSH 474 + T+++A S S E ++S M SP++ T ++ + + FL +Q+H +G L + ++L+ Y + GN A +F R+ +PD S+ +I GYA+ G S AL+L+ +M G++P+ T L +L C H Sbjct: 103 YNTMISAVS--SSKNECFGLYSSMIRHRVSPDRQTFLYLMKASS---FLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGH 244
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP182_ARATH (Pentatricopeptide repeat-containing protein At2g33760 OS=Arabidopsis thaliana GN=PCMP-H6 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.089e-38 Identity = 74/189 (39.15%), Postives = 121/189 (64.02%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRME-QLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 VFDRM E+ +V+W +LV+ Q +EA+ +F QMRE F P+ T S+L +CA + G VH GLD + ++ +AL+++Y++CG++ +A +F+++ + +WTA+IS Y HG + A++LF +ME G PN+VTF+ VL AC+H GLVEEG +++M + + L+P +EH+ C+ Sbjct: 164 VFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCM 352 HSP 2 Score: 106.301 bits (264), Expect = 1.094e-22 Identity = 48/136 (35.29%), Postives = 84/136 (61.76%), Query Frame = 1 Query: 88 LAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 +A + +M SP+ +T +SV+ SCA L L G+ VH +G D +++AL+ Y+KCG++ A +F+R+ V+W +++SG+ Q+GL++ A+Q+F +M + G +P+S TF+ +L AC+ G V G Sbjct: 92 VAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLG 227
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PPR25_ARATH (Pentatricopeptide repeat-containing protein At1g09410 OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2) HSP 1 Score: 159.073 bits (401), Expect = 1.422e-38 Identity = 80/189 (42.33%), Postives = 114/189 (60.32%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLG-VKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 VFD M ER+ SW T++ H + EAL +F M+++ P T+ S+L CA L L G+QVH+ + D D + S L+ MY KCG + ++ +IF+R + D + W +IISGYA HGL E AL++F M G KPN VTF+ L ACS+ G+VEEGL ++ M+ FG+ P+ HYAC+ Sbjct: 287 VFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACM 475
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP246_ARATH (Pentatricopeptide repeat-containing protein At3g22150, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 1.857e-38 Identity = 69/182 (37.91%), Postives = 118/182 (64.84%), Query Frame = 1 Query: 19 ERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 ERD +W ++++ ++Q E+ +F +M E+ PN T++S+L +C+ + +D G+Q+H + LD + + SAL+DMY+K G I A +F + ++V++T +I GY QHG+ E A+ LF M++ G+KP+++TF+ VL ACS+ GL++EGL F++M+E + + P EHY CI Sbjct: 483 ERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCI 664 HSP 2 Score: 103.605 bits (257), Expect = 7.089e-22 Identity = 60/177 (33.90%), Postives = 102/177 (57.63%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFE--RISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG--LHHFQQMQ 519 VF M ERD+VSW T+++A Q +E L + +M+++ F + T++++L + + L + G+Q H+ + G+ + + S L+DMY+K G I + +FE + D +W ++ISGY Q+G +E +FR+M + ++PN+VT +L ACS G V+ G LH F Q Sbjct: 375 VFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQ 550 HSP 3 Score: 76.2554 bits (186), Expect = 1.212e-13 Identity = 50/201 (24.88%), Postives = 95/201 (47.26%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQ-MREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS-----------HGGLVEEGLH------HFQQMQEKFGLVPVME 549 VFD ER++ W T++ + Q E++ +F + + +E ++ T + + L ++ GRQ H K + I ++L+ MY++CG++ ++ +F + D VSW +IS + Q+GL + L L M++ G K + +T +L A S H L+ +G+ + M K GL+ + + Sbjct: 273 VFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQ 473
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP192_ARATH (Pentatricopeptide repeat-containing protein At2g37320 OS=Arabidopsis thaliana GN=PCMP-E50 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 1.857e-38 Identity = 78/189 (41.27%), Postives = 120/189 (63.49%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFR-RMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 VF+ M ER++VSWT +++ +Q + L ++S+MR+ PN +T +++L +C G L GR VH GL + I ++L+ MY KCG++ +A IF++ SN D VSW ++I+GYAQHGL+ A++LF M + G KP+++T+L VL +C H GLV+EG F M E GL P + HY+C+ Sbjct: 177 VFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAE-HGLKPELNHYSCL 364 HSP 2 Score: 74.3294 bits (181), Expect = 4.606e-13 Identity = 41/132 (31.06%), Postives = 69/132 (52.27%), Query Frame = 1 Query: 100 SQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 S ++ + +S + + +SS + SC G H L K G +D + S+L+ +Y G + A +FE + + VSWTA+ISG+AQ + L+L+ +M + PN TF +L AC+ G + +G Sbjct: 109 SSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQG 240
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP369_ARATH (Pentatricopeptide repeat-containing protein At5g08305 OS=Arabidopsis thaliana GN=PCMP-E105 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 3.168e-38 Identity = 81/191 (42.41%), Postives = 118/191 (61.78%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQM-REEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERIS--NPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 VFD M ERD+V+W++++ + + E+ +AL IF QM R N+ T+ SV+ +CA L L+ G+ VH L ++++L+DMYAKCG+I +A +F R S D + W AII G A HG +LQLF +M + + P+ +TFLC+L ACSHGGLV+E H F+ ++E G P EHYAC+ Sbjct: 196 VFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES-GAEPKSEHYACM 385 HSP 2 Score: 74.7146 bits (182), Expect = 3.527e-13 Identity = 48/185 (25.95%), Postives = 84/185 (45.41%), Query Frame = 1 Query: 37 WTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESAL-------------------------------LDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLG-VKPNSVTFLCVLFACSHGGLVEEG 495 W ++ S E++++++ QM P+ T ++ S + L G +H K+GL+ D I + L LD YAK G++ A ++F+ +S D V+W+++I GY + G AL++F +M ++G K N VT + V+ AC+H G + G Sbjct: 76 WNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRG 260 The following BLAST results are available for this feature:
BLAST of CF504011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 212
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504011 ID=CF504011; Name=CF504011; organism=Citrus sinensis; type=EST; length=568bpback to top |