CF504011

Overview
NameCF504011
Unique NameCF504011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length568
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP145_ARATH (Pentatricopeptide repeat-containing protein At2g02980 OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 2.865e-39
Identity = 78/185 (42.16%), Postives = 121/185 (65.41%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHY 555
            VFDR+ E  +V +  ++T +++ +   EAL++F +M+ +   PN+ T+ SVL SCA L  LD G+ +H    K       ++ +AL+DM+AKCG++ +AV IFE++   DT +W+A+I  YA HG +E ++ +F RM    V+P+ +TFL +L ACSH G VEEG  +F QM  KFG+VP ++HY
Sbjct:  186 VFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHY 370          

HSP 2 Score: 108.612 bits (270), Expect = 2.204e-23
Identity = 56/165 (33.94%), Postives = 96/165 (58.18%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            +F+ M E D+V + ++   +S+ +   E  ++F ++ E+   P+ +T  S+L +CA    L+ GRQ+H L  K GLD +  +   L++MY +C ++  A  +F+RI  P  V + A+I+GYA+      AL LFR M+   +KPN +T L VL +C+  G ++ G
Sbjct:   85 LFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLG 249          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP353_ARATH (Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana GN=PCMP-H5 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 4.887e-39
Identity = 76/188 (40.43%), Postives = 115/188 (61.17%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +FD++ E+D+VSWT+++  + + S W E  ++FS++      PN++T + VL +CA L   + G+QVH    + G D      S+L+DMY KCGNI  A  + +    PD VSWT++I G AQ+G  + AL+ F  + + G KP+ VTF+ VL AC+H GLVE+GL  F  + EK  L    +HY C+
Sbjct:  275 IFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCL 462          

HSP 2 Score: 111.309 bits (277), Expect = 3.400e-24
Identity = 60/158 (37.97%), Postives = 91/158 (57.59%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFS-PNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471
            +FD M E+D  SWT +VT + +  + EEAL ++S M+    S PN FT+S  + + A +  +  G+++H    + GLD+D+ + S+L+DMY KCG I EA  IF++I   D VSWT++I  Y +         LF  +     +PN  TF  VL AC+
Sbjct:  173 LFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACA 330          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP311_ARATH (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 4.887e-39
Identity = 74/188 (39.36%), Postives = 121/188 (64.36%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +FD+  ++D+V WTT+++A+ +    +EAL +F +M      P+  ++ SV+ +CA L  LD  + VHS     GL+++  I +AL++MYAKCG +     +FE++   + VSW+++I+  + HG + +AL LF RM+Q  V+PN VTF+ VL+ CSH GLVEEG   F  M +++ + P +EHY C+
Sbjct:  300 IFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCM 487          

HSP 2 Score: 92.8189 bits (229), Expect = 1.251e-18
Identity = 47/195 (24.10%), Postives = 94/195 (48.21%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYA-------------------------------KCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEE 492
            VFD M  RD+V+W T++  + +    +EA  +F +M++    P++  + +++ +C     + + R ++    +  +  D  + +AL+ MYA                               KCG + +A +IF++    D V WT +IS Y +    + AL++F  M   G+KP+ V+   V+ AC++ G++++
Sbjct:  168 VFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDK 362          

HSP 3 Score: 78.9518 bits (193), Expect = 1.870e-14
Identity = 40/140 (28.57%), Postives = 72/140 (51.43%), Query Frame = 1
Query:   61 SQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGG 480
            S+ SE    +  + ++R      +QF+   +L + + +  L  G ++H + FK     D  +E+  +DMYA CG I+ A  +F+ +S+ D V+W  +I  Y + GL + A +LF  M+   V P+ +    ++ AC   G
Sbjct:   87 SRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTG 226          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.089e-38
Identity = 76/199 (38.19%), Postives = 115/199 (57.79%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEE-----------FSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +F +M +RD+V+W T++T +      E+AL +  +M+  E             PN  T+ ++L SCA L  L  G+++H+   K  L TD  + SAL+DMYAKCG +  +  +F++I   + ++W  II  Y  HG  + A+ L R M   GVKPN VTF+ V  ACSH G+V+EGL  F  M+  +G+ P  +HYAC+
Sbjct:  462 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACV 660          

HSP 2 Score: 99.7525 bits (247), Expect = 1.024e-20
Identity = 56/168 (33.33%), Postives = 90/168 (53.57%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCF---LDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            VFDR+ ER+ VSW +L+++     +WE AL  F  M +E   P+ FT+ SV+ +C+ L     L  G+QVH+   + G + +  I + L+ MY K G ++ + ++       D V+W  ++S   Q+     AL+  R M   GV+P+  T   VL ACSH  ++  G
Sbjct:  155 VFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTG 321          

HSP 3 Score: 98.9821 bits (245), Expect = 1.746e-20
Identity = 64/192 (33.33%), Postives = 105/192 (54.69%), Query Frame = 1
Query:   16 GERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTG-LDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQ-LGVKPNSVTFLCVLFACSHGGLV--EEGLHHFQQM----QEKFGLVPVMEHYACIG 567
            G RD+V+W T++++  Q  +  EAL    +M  E   P++FTISSVL +C+ L  L  G+++H+   K G LD +  + SAL+DMY  C  +     +F+ + +     W A+I+GY+Q+   + AL LF  ME+  G+  NS T   V+ AC   G    +E +H F       +++F    +M+ Y+ +G
Sbjct:  263 GGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLG 454          

HSP 4 Score: 92.0485 bits (227), Expect = 2.135e-18
Identity = 52/169 (30.77%), Postives = 87/169 (51.48%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEE-FSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQL-----------GVKPNSVTFLCVLFACS 471
            VFD M +R +  W  ++  +SQ    +EAL +F  M E      N  T++ V+ +C           +H    K GLD D+ +++ L+DMY++ G I  A+ IF ++ + D V+W  +I+GY      E+AL L  +M+ L            +KPNS+T + +L +C+
Sbjct:  360 VFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCA 528          

HSP 5 Score: 78.9518 bits (193), Expect = 1.870e-14
Identity = 43/147 (29.25%), Postives = 77/147 (52.38%), Query Frame = 1
Query:   37 WTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDK-RIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSH 474
            W  L+ +  + +   EA+  +  M      P+ +   ++L + A L  ++ G+Q+H+  +K G   D   + + L+++Y KCG+      +F+RIS  + VSW ++IS        E AL+ FR M    V+P+S T + V+ ACS+
Sbjct:   65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 211          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP212_ARATH (Pentatricopeptide repeat-containing protein At3g04750, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E81 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.089e-38
Identity = 83/190 (43.68%), Postives = 114/190 (60.00%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQ--CSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            VFD+M +RD+VSW +L+  +S+  C +       +     E+  P++ T+ S++   A    L  GR VH L  +  L  D  + SAL+DMY KCG I  A M+F+  +  D   WT++I+G A HG  + ALQLF RM++ GV PN+VT L VL ACSH GLVEEGLH F  M++KFG  P  EHY  +
Sbjct:  322 VFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSL 511          

HSP 2 Score: 71.2478 bits (173), Expect = 3.899e-12
Identity = 49/200 (24.50%), Postives = 94/200 (47.00%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTG--LDTDKRIESALLDMYAKC-------------------------------GNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENAL-QLFRRMEQL-GVKPNSVTFLCVLFACSHGGLVEEG 495
            VF RM   D+ S+  ++  +++     EAL ++ +M  +   P+++T+ S+LV C  L  +  G+ VH    + G    ++  + +ALLDMY KC                               G++  A  +F+++   D VSW +++ GY++ G  +  + +LF  M  +  VKP+ VT + ++   ++ G +  G
Sbjct:  188 VFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHG 387          

HSP 3 Score: 69.707 bits (169), Expect = 1.134e-11
Identity = 43/147 (29.25%), Postives = 76/147 (51.70%), Query Frame = 1
Query:   37 WTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTG-LDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSH 474
            + T+++A S  S   E   ++S M     SP++ T   ++ + +   FL   +Q+H     +G L     + ++L+  Y + GN   A  +F R+ +PD  S+  +I GYA+ G S  AL+L+ +M   G++P+  T L +L  C H
Sbjct:  103 YNTMISAVS--SSKNECFGLYSSMIRHRVSPDRQTFLYLMKASS---FLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGH 244          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP182_ARATH (Pentatricopeptide repeat-containing protein At2g33760 OS=Arabidopsis thaliana GN=PCMP-H6 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.089e-38
Identity = 74/189 (39.15%), Postives = 121/189 (64.02%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRME-QLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            VFDRM E+ +V+W +LV+   Q    +EA+ +F QMRE  F P+  T  S+L +CA    +  G  VH      GLD + ++ +AL+++Y++CG++ +A  +F+++   +  +WTA+IS Y  HG  + A++LF +ME   G  PN+VTF+ VL AC+H GLVEEG   +++M + + L+P +EH+ C+
Sbjct:  164 VFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCM 352          

HSP 2 Score: 106.301 bits (264), Expect = 1.094e-22
Identity = 48/136 (35.29%), Postives = 84/136 (61.76%), Query Frame = 1
Query:   88 LAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            +A + +M     SP+ +T +SV+ SCA L  L  G+ VH     +G   D  +++AL+  Y+KCG++  A  +F+R+     V+W +++SG+ Q+GL++ A+Q+F +M + G +P+S TF+ +L AC+  G V  G
Sbjct:   92 VAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLG 227          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PPR25_ARATH (Pentatricopeptide repeat-containing protein At1g09410 OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 1.422e-38
Identity = 80/189 (42.33%), Postives = 114/189 (60.32%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLG-VKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            VFD M ER+  SW T++  H +     EAL +F  M+++   P   T+ S+L  CA L  L  G+QVH+   +   D D  + S L+ MY KCG + ++ +IF+R  + D + W +IISGYA HGL E AL++F  M   G  KPN VTF+  L ACS+ G+VEEGL  ++ M+  FG+ P+  HYAC+
Sbjct:  287 VFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACM 475          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP246_ARATH (Pentatricopeptide repeat-containing protein At3g22150, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.857e-38
Identity = 69/182 (37.91%), Postives = 118/182 (64.84%), Query Frame = 1
Query:   19 ERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            ERD  +W ++++ ++Q    E+   +F +M E+   PN  T++S+L +C+ +  +D G+Q+H    +  LD +  + SAL+DMY+K G I  A  +F +    ++V++T +I GY QHG+ E A+ LF  M++ G+KP+++TF+ VL ACS+ GL++EGL  F++M+E + + P  EHY CI
Sbjct:  483 ERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCI 664          

HSP 2 Score: 103.605 bits (257), Expect = 7.089e-22
Identity = 60/177 (33.90%), Postives = 102/177 (57.63%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFE--RISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG--LHHFQQMQ 519
            VF  M ERD+VSW T+++A  Q    +E L +  +M+++ F  +  T++++L + + L   + G+Q H+   + G+  +  + S L+DMY+K G I  +  +FE    +  D  +W ++ISGY Q+G +E    +FR+M +  ++PN+VT   +L ACS  G V+ G  LH F   Q
Sbjct:  375 VFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQ 550          

HSP 3 Score: 76.2554 bits (186), Expect = 1.212e-13
Identity = 50/201 (24.88%), Postives = 95/201 (47.26%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQ-MREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS-----------HGGLVEEGLH------HFQQMQEKFGLVPVME 549
            VFD   ER++  W T++  + Q     E++ +F + +  +E   ++ T      + + L  ++ GRQ H    K   +    I ++L+ MY++CG++ ++  +F  +   D VSW  +IS + Q+GL +  L L   M++ G K + +T   +L A S           H  L+ +G+       +   M  K GL+ + +
Sbjct:  273 VFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQ 473          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP192_ARATH (Pentatricopeptide repeat-containing protein At2g37320 OS=Arabidopsis thaliana GN=PCMP-E50 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.857e-38
Identity = 78/189 (41.27%), Postives = 120/189 (63.49%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFR-RMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            VF+ M ER++VSWT +++  +Q    +  L ++S+MR+    PN +T +++L +C G   L  GR VH      GL +   I ++L+ MY KCG++ +A  IF++ SN D VSW ++I+GYAQHGL+  A++LF   M + G KP+++T+L VL +C H GLV+EG   F  M E  GL P + HY+C+
Sbjct:  177 VFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAE-HGLKPELNHYSCL 364          

HSP 2 Score: 74.3294 bits (181), Expect = 4.606e-13
Identity = 41/132 (31.06%), Postives = 69/132 (52.27%), Query Frame = 1
Query:  100 SQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            S ++ + +S + + +SS + SC        G   H L  K G  +D  + S+L+ +Y   G +  A  +FE +   + VSWTA+ISG+AQ    +  L+L+ +M +    PN  TF  +L AC+  G + +G
Sbjct:  109 SSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQG 240          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP369_ARATH (Pentatricopeptide repeat-containing protein At5g08305 OS=Arabidopsis thaliana GN=PCMP-E105 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.168e-38
Identity = 81/191 (42.41%), Postives = 118/191 (61.78%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQM-REEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERIS--NPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            VFD M ERD+V+W++++  + +  E+ +AL IF QM R      N+ T+ SV+ +CA L  L+ G+ VH       L     ++++L+DMYAKCG+I +A  +F R S    D + W AII G A HG    +LQLF +M +  + P+ +TFLC+L ACSHGGLV+E  H F+ ++E  G  P  EHYAC+
Sbjct:  196 VFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES-GAEPKSEHYACM 385          

HSP 2 Score: 74.7146 bits (182), Expect = 3.527e-13
Identity = 48/185 (25.95%), Postives = 84/185 (45.41%), Query Frame = 1
Query:   37 WTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESAL-------------------------------LDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLG-VKPNSVTFLCVLFACSHGGLVEEG 495
            W  ++   S     E++++++ QM      P+  T   ++ S + L     G  +H    K+GL+ D  I + L                               LD YAK G++  A ++F+ +S  D V+W+++I GY + G    AL++F +M ++G  K N VT + V+ AC+H G +  G
Sbjct:   76 WNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRG 260          
The following BLAST results are available for this feature:
BLAST of CF504011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 212
Match NameE-valueIdentityDescription
PP145_ARATH2.865e-3942.16Pentatricopeptide repeat-containing protein At2g02... [more]
PP353_ARATH4.887e-3940.43Pentatricopeptide repeat-containing protein At4g37... [more]
PP311_ARATH4.887e-3939.36Pentatricopeptide repeat-containing protein At4g14... [more]
PP285_ARATH1.089e-3838.19Pentatricopeptide repeat-containing protein At3g57... [more]
PP212_ARATH1.089e-3843.68Pentatricopeptide repeat-containing protein At3g04... [more]
PP182_ARATH1.089e-3839.15Pentatricopeptide repeat-containing protein At2g33... [more]
PPR25_ARATH1.422e-3842.33Pentatricopeptide repeat-containing protein At1g09... [more]
PP246_ARATH1.857e-3837.91Pentatricopeptide repeat-containing protein At3g22... [more]
PP192_ARATH1.857e-3841.27Pentatricopeptide repeat-containing protein At2g37... [more]
PP369_ARATH3.168e-3842.41Pentatricopeptide repeat-containing protein At5g08... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-499 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-12_C10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504011 ID=CF504011; Name=CF504011; organism=Citrus sinensis; type=EST; length=568bp
GTTTTTGACAGGATGGGGGAGAGAGATATGGTGTCTTGGACAACTCTTGT
GACTGCTCACTCTCAATGTTCTGAATGGGAGGAAGCACTTGCGATTTTTT
CCCAAATGAGGGAGGAAGAATTTAGTCCTAACCAGTTCACAATTTCCAGT
GTTCTTGTATCTTGTGCTGGCCTTTGTTTTCTAGATTTTGGTCGGCAAGT
TCATAGTCTTTGTTTCAAGACTGGGTTGGACACTGACAAGCGCATAGAAA
GTGCTTTGTTGGACATGTATGCCAAATGTGGCAATATAAGTGAGGCAGTG
ATGATATTTGAAAGGATTTCCAACCCTGATACTGTTTCATGGACAGCTAT
AATATCGGGTTATGCCCAGCACGGTCTCTCGGAAAATGCCCTTCAACTCT
TTAGAAGAATGGAACAGTTGGGTGTGAAGCCTAACTCTGTTACCTTTCTC
TGTGTTCTGTTTGCTTGCAGCCATGGAGGACTGGTAGAGGAAGGCCTGCA
CCATTTTCAACAAATGCAGGAAAAATTTGGTCTGGTGCCAGTGATGGAAC
ATTATGCTTGTATTGGTG
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