CF504011

Overview
NameCF504011
Unique NameCF504011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length568
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP210_ARATH (Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.168e-38
Identity = 70/188 (37.23%), Postives = 118/188 (62.77%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +F  MG  D V+W T+++A  +  ++   L + +QMR+ E  P+  T    L  CA L     G+++H    + G +++ +I +AL++MY+KCG +  +  +FER+S  D V+WT +I  Y  +G  E AL+ F  ME+ G+ P+SV F+ +++ACSH GLV+EGL  F++M+  + + P++EHYAC+
Sbjct:  465 IFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACV 652          

HSP 2 Score: 105.145 bits (261), Expect = 2.437e-22
Identity = 56/172 (32.56%), Postives = 102/172 (59.30%), Query Frame = 1
Query:    1 VFDRMGE-RDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVE--EGLHHF 507
            VF R+   +++  W +++ A S+   + EAL  + ++RE + SP+++T  SV+ +CAGL   + G  V+      G ++D  + +AL+DMY++ G ++ A  +F+ +   D VSW ++ISGY+ HG  E AL+++  ++   + P+S T   VL A  +  +V+  +GLH F
Sbjct:   61 VFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGF 232          

HSP 3 Score: 98.5969 bits (244), Expect = 2.281e-20
Identity = 51/153 (33.33%), Postives = 89/153 (58.17%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVL 459
            VFD M  RD VS+ T++  + +    EE++ +F +   ++F P+  T+SSVL +C  L  L   + +++   K G   +  + + L+D+YAKCG++  A  +F  +   DTVSW +IISGY Q G    A++LF+ M  +  + + +T+L ++
Sbjct:  264 VFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLI 415          

HSP 4 Score: 98.2117 bits (243), Expect = 2.979e-20
Identity = 51/157 (32.48%), Postives = 84/157 (53.50%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471
            VF+ M  +D VSW ++++ + Q  +  EA+ +F  M   E   +  T   ++     L  L FG+ +HS   K+G+  D  + +AL+DMYAKCG + +++ IF  +   DTV+W  +IS   + G     LQ+  +M +  V P+  TFL  L  C+
Sbjct:  364 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCA 520          

HSP 5 Score: 94.7449 bits (234), Expect = 3.293e-19
Identity = 52/159 (32.70%), Postives = 92/159 (57.86%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLG-VKPNSVTFLCVLFACSH 474
            VFD M  RD+VSW +L++ +S    +EEAL I+ +++     P+ FT+SSVL +   L  +  G+ +H    K+G+++   + + L+ MY K    ++A  +F+ +   D+VS+  +I GY +  + E ++++F  +E L   KP+ +T   VL AC H
Sbjct:  163 VFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--LENLDQFKPDLLTVSSVLRACGH 319          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP357_ARATH (Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 4.137e-38
Identity = 76/188 (40.43%), Postives = 117/188 (62.23%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            VFD M  +D+V W ++   + Q SE EEAL +F +++     P++FT ++++ +   L  +  G++ H    K GL+ +  I +ALLDMYAKCG+  +A   F+  ++ D V W ++IS YA HG  + ALQ+  +M   G++PN +TF+ VL ACSH GLVE+GL  F+ M  +FG+ P  EHY C+
Sbjct:  511 VFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCM 697          

HSP 2 Score: 115.931 bits (289), Expect = 1.380e-25
Identity = 52/157 (33.12%), Postives = 95/157 (60.51%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471
            VFD + E+  V+WTT+++   +      +L +F Q+ E+   P+ + +S+VL +C+ L FL+ G+Q+H+   + GL+ D  + + L+D Y KCG +  A  +F  + N + +SWT ++SGY Q+ L + A++LF  M + G+KP+      +L +C+
Sbjct:  205 VFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCA 361          

HSP 3 Score: 107.842 bits (268), Expect = 3.759e-23
Identity = 55/158 (34.81%), Postives = 95/158 (60.13%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLS---ENALQLFRRMEQLGVKPNSVTFLCVLFA 465
            +F+ M  ++++SWTTL++ + Q +  +EA+ +F+ M +    P+ +  SS+L SCA L  L FG QVH+   K  L  D  + ++L+DMYAKC  +++A  +F+  +  D V + A+I GY++ G       AL +FR M    ++P+ +TF+ +L A
Sbjct:  306 LFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA 463          

HSP 4 Score: 105.916 bits (263), Expect = 1.428e-22
Identity = 63/172 (36.63%), Postives = 100/172 (58.14%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQM-REEEFSPNQFTISSVLVSCAGLCFLDFGR------QVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            VF++M ER++VSW+T+V+A +    +EE+L +F +  R  + SPN++ +SS + +C+GL     GR      Q+ S   K+G D D  + + L+D Y K GNI  A ++F+ +    TV+WT +ISG  + G S  +LQLF ++ +  V P+      VL ACS    +E G
Sbjct:  101 VFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLD----GRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGG 268          

HSP 5 Score: 93.5893 bits (231), Expect = 7.336e-19
Identity = 55/178 (30.90%), Postives = 94/178 (52.81%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQC-SEWE--EALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEK 525
            VFD     D+V +  ++  +S+  ++WE  EAL IF  MR     P+  T  S+L + A L  L   +Q+H L FK GL+ D    SAL+D+Y+ C  + ++ ++F+ +   D V W ++ +GY Q   +E AL LF  ++    +P+  TF  ++ A  +   V+ G     Q+ ++
Sbjct:  407 VFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKR 584          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP252_ARATH (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 7.057e-38
Identity = 75/188 (39.89%), Postives = 119/188 (63.30%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            VFD +  R+ VSW  L+  H++ S  E+AL +F  M  + F P+ F+ +S+  +C+   FL+ G+ VH+   K+G        + LLDMYAK G+I +A  IF+R++  D VSW ++++ YAQHG  + A+  F  M ++G++PN ++FL VL ACSH GL++EG H+++ M +K G+VP   HY  +
Sbjct:  218 VFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELM-KKDGIVPEAWHYVTV 404          

HSP 2 Score: 130.183 bits (326), Expect = 7.073e-30
Identity = 65/169 (38.46%), Postives = 108/169 (63.91%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCA----GLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            VF++M +RD V+WTTL++ +SQ     +AL  F+QM    +SPN+FT+SSV+ + A    G C    G Q+H  C K G D++  + SALLD+Y + G + +A ++F+ + + + VSW A+I+G+A+   +E AL+LF+ M + G +P+  ++  +  ACS  G +E+G
Sbjct:  117 VFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCC----GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG 281          

HSP 3 Score: 75.0998 bits (183), Expect = 2.700e-13
Identity = 44/123 (35.77%), Postives = 65/123 (52.85%), Query Frame = 1
Query:  145 SSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVL--FACSHGGLVEEGLHHF 507
            +++L  C     L  GR VH+   ++    D  + + LL+MYAKCG++ EA  +FE++   D V+WT +ISGY+QH    +AL  F +M + G  PN  T   V+   A    G     LH F
Sbjct:   64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGF 186          

HSP 4 Score: 71.633 bits (174), Expect = 2.985e-12
Identity = 38/129 (29.46%), Postives = 69/129 (53.49%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERIS-NPDTVSWTAIISGYAQHGLSE 384
            +FDR+ +RD+VSW +L+TA++Q    +EA+  F +MR     PN+ +  SVL +C+    LD G   + L  K G+  +      ++D+  + G+++ A+   E +   P    W A+++    H  +E
Sbjct:  319 IFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE 447          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP108_ARATH (Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 7.057e-38
Identity = 72/188 (38.30%), Postives = 116/188 (61.70%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            VFDRM ++++VSWT +V  + Q    EEA+ IF  M+     P+ +T+   + +CA +  L+ G Q H     +GL     + ++L+ +Y KCG+I ++  +F  ++  D VSWTA++S YAQ G +   +QLF +M Q G+KP+ VT   V+ ACS  GLVE+G  +F+ M  ++G+VP + HY+C+
Sbjct:  327 VFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCM 514          

HSP 2 Score: 110.538 bits (275), Expect = 5.800e-24
Identity = 53/159 (33.33%), Postives = 92/159 (57.86%), Query Frame = 1
Query:   19 ERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            E+D VSW  ++   +Q    +EA+  F +M+ +    +Q+   SVL +C GL  ++ G+Q+H+   +T       + SAL+DMY KC  +  A  +F+R+   + VSWTA++ GY Q G +E A+++F  M++ G+ P+  T    + AC++   +EEG
Sbjct:  232 EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEG 390          

HSP 3 Score: 81.2629 bits (199), Expect = 3.768e-15
Identity = 50/174 (28.74%), Postives = 95/174 (54.60%), Query Frame = 1
Query:    4 FDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPN--QFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQ 519
            F+++ +RD V+W  L+  +S       A+  ++ M  + FS N  + T+ ++L   +    +  G+Q+H    K G ++   + S LL MYA  G IS+A  +F  + + +TV + +++ G    G+ E+ALQLFR ME+     +SV++  ++   +  GL +E +  F++M+
Sbjct:   95 FEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRD-FSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEK-----DSVSWAAMIKGLAQNGLAKEAIECFREMK 262          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP364_ARATH (Pentatricopeptide repeat-containing protein At5g04780 OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 1.204e-37
Identity = 71/188 (37.77%), Postives = 118/188 (62.77%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            VF+ M ++  V+W+++V  + Q   +EEAL ++ + +      NQFT+SSV+ +C+ L  L  G+Q+H++  K+G  ++  + S+ +DMYAKCG++ E+ +IF  +   +   W  IISG+A+H   +  + LF +M+Q G+ PN VTF  +L  C H GLVEEG   F+ M+  +GL P + HY+C+
Sbjct:  219 VFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCM 406          

HSP 2 Score: 127.872 bits (320), Expect = 3.510e-29
Identity = 66/165 (40.00%), Postives = 105/165 (63.64%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            VFD M ER +VSW T++  +++     EAL IF +MR E F  ++FTISSVL +C   C     +++H L  KT +D +  + +ALLD+YAKCG I +AV +FE + +  +V+W+++++GY Q+   E AL L+RR +++ ++ N  T   V+ ACS+   + EG
Sbjct:  118 VFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEG 282          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP315_ARATH (Pentatricopeptide repeat-containing protein At4g16470 OS=Arabidopsis thaliana GN=PCMP-E12 PE=2 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 2.053e-37
Identity = 68/188 (36.17%), Postives = 119/188 (63.30%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +F  +  RD++ W  +++ + Q    +E L I+  MR+    P+Q+T +SV  +C+ L  L+ G++ H++  K  + ++  ++SAL+DMY KC + S+   +F+++S  + ++WT++ISGY  HG     L+ F +M++ G +PN VTFL VL AC+HGGLV++G  HF  M+  +G+ P  +HYA +
Sbjct:  165 LFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAM 352          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP207_ARATH (Pentatricopeptide repeat-containing protein At3g02330 OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 2.053e-37
Identity = 71/176 (40.34%), Postives = 115/176 (65.34%), Query Frame = 1
Query:   31 VSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYA 558
            VSW ++++ +    + E+A  +F++M E   +P++FT ++VL +CA L     G+Q+H+   K  L +D  I S L+DMY+KCG++ ++ ++FE+    D V+W A+I GYA HG  E A+QLF RM    +KPN VTF+ +L AC+H GL+++GL +F  M+  +GL P + HY+
Sbjct:  569 VSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYS 744          

HSP 2 Score: 114.39 bits (285), Expect = 4.016e-25
Identity = 64/178 (35.96%), Postives = 94/178 (52.81%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMI----FERISNPDT----------------VSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSH 474
            VFD M  RD VSW  ++ AH Q  +  E L +F  M      P++FT  S+L +C G   L +G ++HS   K+G+ ++  +  +L+DMY+KCG I EA  I    F+R +   T                VSW +IISGY     SE+A  LF RM ++G+ P+  T+  VL  C++
Sbjct:  439 VFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGS-LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCAN 615          

HSP 3 Score: 94.7449 bits (234), Expect = 3.293e-19
Identity = 51/156 (32.69%), Postives = 87/156 (55.77%), Query Frame = 1
Query:    4 FDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471
            F+ M  RD+VSW ++++ + Q  E  +++ +F  M  E    +  T + +L  C+ L     G Q+H +  + G DTD    SALLDMYAK     E++ +F+ I   ++VSW+AII+G  Q+ L   AL+ F+ M+++    +   +  VL +C+
Sbjct:  137 FNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 292          

HSP 4 Score: 93.5893 bits (231), Expect = 7.336e-19
Identity = 50/161 (31.06%), Postives = 86/161 (53.42%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGL 483
            +FD     +  S+  ++T +SQ     +AL +F ++       ++ ++S V  +CA +  L  G Q++ L  K+ L  D  + +A +DMY KC  ++EA  +F+ +   D VSW AII+ + Q+G     L LF  M +  ++P+  TF  +L AC+ G L
Sbjct:  338 LFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSL 498          

HSP 5 Score: 92.8189 bits (229), Expect = 1.251e-18
Identity = 55/166 (33.13%), Postives = 89/166 (53.61%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGL 498
            VF  + E++ VSW+ ++    Q +    AL  F +M++     +Q   +SVL SCA L  L  G Q+H+   K+    D  + +A LDMYAKC N+ +A ++F+   N +  S+ A+I+GY+Q      AL LF R+   G+  + ++   V  AC+    + EGL
Sbjct:  237 VFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGL 402          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP308_ARATH (Pentatricopeptide repeat-containing protein At4g14050, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2 SV=3)

HSP 1 Score: 154.836 bits (390), Expect = 2.682e-37
Identity = 77/182 (42.31%), Postives = 114/182 (62.64%), Query Frame = 1
Query:   22 RDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSP-NQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +++ SWT L++   Q  +  EA ++F++MR E     +   +SS++ +CA L     GRQVH L    G D+   I +AL+DMYAKC ++  A  IF R+ + D VSWT++I G AQHG +E AL L+  M   GVKPN VTF+ +++ACSH G VE+G   FQ M + +G+ P ++HY C+
Sbjct:  200 KNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCL 381          

HSP 2 Score: 109.768 bits (273), Expect = 9.893e-24
Identity = 54/136 (39.71%), Postives = 87/136 (63.97%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEE-FSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFR 405
            VFD M  RD ++W +++TA +Q +   + L++FS +       P+ F  S+++ +CA L  +D GRQVH     +    D+ ++S+L+DMYAKCG ++ A  +F+ I   +T+SWTA++SGYA+ G  E AL+LFR
Sbjct:   60 VFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFR 195          

HSP 3 Score: 70.0922 bits (170), Expect = 8.686e-12
Identity = 37/135 (27.41%), Postives = 73/135 (54.07%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQV-HSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERIS-NPDTVSWTAIISGYAQHGLSENALQL 399
            +F RM  RD+VSWT+L+   +Q  + E+ALA++  M      PN+ T   ++ +C+ + F++ GR++  S+    G+    +  + LLD+  + G + EA  +   +   PD  +W A++S   + G  +  +++
Sbjct:  295 IFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRI 429          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PPR80_ARATH (Pentatricopeptide repeat-containing protein At1g53600, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E63 PE=2 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 3.502e-37
Identity = 75/188 (39.89%), Postives = 115/188 (61.17%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +F  M E+D ++WT +++A      +EEAL  F +M ++E  PN +T SSVL + A L  L  G Q+H    K  +  D  ++++L+ MY KCGN ++A  IF  IS P+ VS+  +ISGY+ +G  + AL+LF  +E  G +PN VTFL +L AC H G V+ G  +F+ M+  + + P  +HYAC+
Sbjct:  394 LFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACM 581          

HSP 2 Score: 88.9669 bits (219), Expect = 1.807e-17
Identity = 54/203 (26.60%), Postives = 99/203 (48.77%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREE-EFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRM-------------------------EQLGVKP--NSVTFLCVLFACSHGGLVEEGLHHFQQMQEK 525
            +FDRM ER++++WT ++  + +   +E+   +F +MR+E +   N  T++ +  +C        G Q+H L  +  L+ D  + ++L+ MY+K G + EA  +F  + N D+VSW ++I+G  Q      A +LF +M                         E  G+ P  +++T+  ++ A    G  EE L  F +M +K
Sbjct:  230 LFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQK 432          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PPR10_ARATH (Pentatricopeptide repeat-containing protein At1g04840 OS=Arabidopsis thaliana GN=PCMP-H64 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 3.502e-37
Identity = 72/188 (38.30%), Postives = 117/188 (62.23%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +F+ M E+++VSWTTL+   SQ  ++E A++ + +M E+   PN++TI++VL +C+    L  G ++H      G+  D+ I +AL+DMYAKCG +  A  +F  +++ D +SWTA+I G+A HG    A+Q FR+M   G KP+ V FL VL AC +   V+ GL+ F  M+  + + P ++HY  +
Sbjct:  249 LFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLV 436          
The following BLAST results are available for this feature:
BLAST of CF504011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 212
Match NameE-valueIdentityDescription
PP210_ARATH3.168e-3837.23Pentatricopeptide repeat-containing protein At3g03... [more]
PP357_ARATH4.137e-3840.43Pentatricopeptide repeat-containing protein At4g39... [more]
PP252_ARATH7.057e-3839.89Pentatricopeptide repeat-containing protein At3g24... [more]
PP108_ARATH7.057e-3838.30Putative pentatricopeptide repeat-containing prote... [more]
PP364_ARATH1.204e-3737.77Pentatricopeptide repeat-containing protein At5g04... [more]
PP315_ARATH2.053e-3736.17Pentatricopeptide repeat-containing protein At4g16... [more]
PP207_ARATH2.053e-3740.34Pentatricopeptide repeat-containing protein At3g02... [more]
PP308_ARATH2.682e-3742.31Pentatricopeptide repeat-containing protein At4g14... [more]
PPR80_ARATH3.502e-3739.89Pentatricopeptide repeat-containing protein At1g53... [more]
PPR10_ARATH3.502e-3738.30Pentatricopeptide repeat-containing protein At1g04... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-499 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-12_C10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504011 ID=CF504011; Name=CF504011; organism=Citrus sinensis; type=EST; length=568bp
GTTTTTGACAGGATGGGGGAGAGAGATATGGTGTCTTGGACAACTCTTGT
GACTGCTCACTCTCAATGTTCTGAATGGGAGGAAGCACTTGCGATTTTTT
CCCAAATGAGGGAGGAAGAATTTAGTCCTAACCAGTTCACAATTTCCAGT
GTTCTTGTATCTTGTGCTGGCCTTTGTTTTCTAGATTTTGGTCGGCAAGT
TCATAGTCTTTGTTTCAAGACTGGGTTGGACACTGACAAGCGCATAGAAA
GTGCTTTGTTGGACATGTATGCCAAATGTGGCAATATAAGTGAGGCAGTG
ATGATATTTGAAAGGATTTCCAACCCTGATACTGTTTCATGGACAGCTAT
AATATCGGGTTATGCCCAGCACGGTCTCTCGGAAAATGCCCTTCAACTCT
TTAGAAGAATGGAACAGTTGGGTGTGAAGCCTAACTCTGTTACCTTTCTC
TGTGTTCTGTTTGCTTGCAGCCATGGAGGACTGGTAGAGGAAGGCCTGCA
CCATTTTCAACAAATGCAGGAAAAATTTGGTCTGGTGCCAGTGATGGAAC
ATTATGCTTGTATTGGTG
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