CF504011
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 3.502e-37 Identity = 75/187 (40.11%), Postives = 112/187 (59.89%), Query Frame = 1 Query: 4 FDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 F++ D ++W LV+ Q EEAL +F +M E N FT S + + + + G+QVH++ KTG D++ + +AL+ MYAKCG+IS+A F +S + VSW AII+ Y++HG AL F +M V+PN VT + VL ACSH GLV++G+ +F+ M ++GL P EHY C+ Sbjct: 649 FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCV 835 HSP 2 Score: 111.309 bits (277), Expect = 3.400e-24 Identity = 52/162 (32.10%), Postives = 98/162 (60.49%), Query Frame = 1 Query: 10 RMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 R +D+VSWTT++ ++Q + ++AL F QM + ++ +++ + +CAGL L G+Q+H+ +G +D ++AL+ +Y++CG I E+ + FE+ D ++W A++SG+ Q G +E AL++F RM + G+ N+ TF + A S +++G Sbjct: 550 RFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQG 711 HSP 3 Score: 107.842 bits (268), Expect = 3.759e-23 Identity = 55/157 (35.03%), Postives = 85/157 (54.14%), Query Frame = 1 Query: 25 DMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 ++V W ++ A+ + + IF QM+ EE PNQ+T S+L +C L L+ G Q+HS KT + + S L+DMYAK G + A I R + D VSWT +I+GY Q+ + AL FR+M G++ + V + AC+ ++EG Sbjct: 454 NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG 610 HSP 4 Score: 102.064 bits (253), Expect = 2.063e-21 Identity = 55/165 (33.33%), Postives = 89/165 (53.94%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 VFD + +D SW +++ S+ EA+ +F M P + SSVL +C + L+ G Q+H L K G +D + +AL+ +Y GN+ A IF +S D V++ +I+G +Q G E A++LF+RM G++P+S T ++ ACS G + G Sbjct: 244 VFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 408 HSP 5 Score: 101.293 bits (251), Expect = 3.518e-21 Identity = 56/179 (31.28%), Postives = 97/179 (54.19%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLH-HFQQMQEKFGL 534 +F M +RD V++ TL+ SQC E+A+ +F +M + P+ T++S++V+C+ L G+Q+H+ K G ++ +IE ALL++YAKC +I A+ F + V W ++ Y N+ ++FR+M+ + PN T+ +L C G +E G H Q ++ F L Sbjct: 345 IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL 523 HSP 6 Score: 83.9593 bits (206), Expect = 5.813e-16 Identity = 49/157 (31.21%), Postives = 79/157 (50.32%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSC-AGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFAC 468 VFD M ER + +W ++ + + E +F +M E +PN+ T S VL +C G D Q+H+ GL + + L+D+Y++ G + A +F+ + D SW A+ISG +++ A++LF M LG+ P F VL AC Sbjct: 142 VFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSAC 298
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PPR83_ARATH (Putative pentatricopeptide repeat-containing protein At1g56570 OS=Arabidopsis thaliana GN=PCMP-E64 PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 4.574e-37 Identity = 69/188 (36.70%), Postives = 120/188 (63.83%), Query Frame = 1 Query: 4 FDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIF-ERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 F M ++D+++W TL++ + S+ EAL +F + + F PN +T +S++ +CA + L+ G+Q+H F+ G + + + +AL+DMYAKCGNI ++ +F E + + VSWT+++ GY HG A++LF +M G++P+ + F+ VL AC H GLVE+GL +F M+ ++G+ P + Y C+ Sbjct: 271 FHEMEDKDLITWNTLISELER-SDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCV 457 HSP 2 Score: 98.5969 bits (244), Expect = 2.281e-20 Identity = 51/151 (33.77%), Postives = 88/151 (58.28%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAV-MIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRM--EQLGVKPNSVT 444 +FD M +RD+V+WT ++T ++ + A F +M ++ SPN+FT+SSVL SC + L +G VH + K G++ +++A+++MYA C EA +IF I + V+WT +I+G+ G L+++++M E V P +T Sbjct: 67 LFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCIT 217 HSP 3 Score: 87.4261 bits (215), Expect = 5.258e-17 Identity = 45/158 (28.48%), Postives = 85/158 (53.80%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSH 474 +F + ++ V+WTTL+T + + L ++ QM E + I+ + + A + + G+Q+H+ K G ++ + +++LD+Y +CG +SEA F + + D ++W +IS + SE AL +F+R E G PN TF ++ AC++ Sbjct: 169 IFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSE-ALLMFQRFESQGFVPNCYTFTSLVAACAN 325
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP121_ARATH (Pentatricopeptide repeat-containing protein At1g74600, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 4.574e-37 Identity = 77/188 (40.96%), Postives = 115/188 (61.17%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 V+DR+ E D VS ++L++ +SQ ++ +F M F+ + F ISS+L + A G QVH+ K GL T+ + S+LL MY+K G+I + F +I+ PD ++WTA+I+ YAQHG + ALQ++ M++ G KP+ VTF+ VL ACSHGGLVEE H M + +G+ P HY C+ Sbjct: 608 VYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCM 795 HSP 2 Score: 103.99 bits (258), Expect = 5.428e-22 Identity = 54/152 (35.53%), Postives = 88/152 (57.89%), Query Frame = 1 Query: 37 WTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEE 492 W T++ + + +F +M P+ +T SSVL +CA L L FG+ V + K G + D + +A++D+YAKCG+++EA+ +F RI NP VSWT ++SGY + + +AL++F+ M GV+ N+ T V+ AC +V E Sbjct: 219 WNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCE 369 HSP 3 Score: 101.293 bits (251), Expect = 3.518e-21 Identity = 48/157 (30.57%), Postives = 92/157 (58.60%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471 +F + +D W ++++ ++ EA+ +FS+M ++ SP++ T+++VL C+ L G+++H + G+D + SAL++MY+KCG++ A +++R+ D VS +++ISGY+QHGL ++ LFR M G +S +L A + Sbjct: 507 LFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAA 663 HSP 4 Score: 89.7373 bits (221), Expect = 1.059e-17 Identity = 46/142 (32.39%), Postives = 81/142 (57.04%), Query Frame = 1 Query: 46 LVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471 ++T+ SQ + +A+ +F++M +E ++F++ S+L + L L+ G+QVH K+GL D + S+L +Y+KCG++ E+ +F+ I D W ++ISG+ ++G A+ LF M G P+ T VL CS Sbjct: 424 MITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL---SVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCS 562 HSP 5 Score: 79.337 bits (194), Expect = 1.432e-14 Identity = 51/175 (29.14%), Postives = 91/175 (52.00%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVS-WTAIISGYAQHGLSENALQLFRRMEQLGVKPN--SVTFLCVLFAC------SHGGLVEEGL 498 VF R+ +VSWT +++ +++ ++ AL IF +MR N T++SV+ +C + QVH+ FK+G D + +AL+ MY+K G+I + +FE + + + +I+ ++Q A++LF RM Q G++ + SV L + C HG ++ GL Sbjct: 307 VFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGL 481 HSP 6 Score: 68.9366 bits (167), Expect = 1.935e-11 Identity = 45/157 (28.66%), Postives = 77/157 (49.04%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471 +FD + + D+VS +++ + Q +EE+L FS+M F N+ + SV+ +C+ L F V K G + +ESAL+D+++K +A +F + + W II+G ++ LF M KP+S T+ VL AC+ Sbjct: 106 LFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACA 262
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP272_ARATH (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 5.974e-37 Identity = 72/187 (38.50%), Postives = 116/187 (62.03%), Query Frame = 1 Query: 4 FDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 F+ + E+++VS+ T + + +E+A + S++ E E + FT +S+L A + + G Q+HS K GL ++ + +AL+ MY+KCG+I A +F + N + +SWT++I+G+A+HG + L+ F +M + GVKPN VT++ +L ACSH GLV EG HF M E + P MEHYAC+ Sbjct: 431 FESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACM 617 HSP 2 Score: 108.612 bits (270), Expect = 2.204e-23 Identity = 62/163 (38.04%), Postives = 96/163 (58.90%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKC---GNISEAVMIFERISNPDTVSWTAIISGYAQH-GLSENALQLFRRMEQLG-VKPNSVTFLCVLFACSH 474 VFD+M E ++V+WT ++T Q EA+ F M F ++FT+SSV +CA L L G+Q+HS ++GL D +E +L+DMYAKC G++ + +F+R+ + +SWTA+I+GY ++ L+ A+ LF M G V+PN TF AC + Sbjct: 225 VFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385 HSP 3 Score: 85.5001 bits (210), Expect = 1.998e-16 Identity = 48/167 (28.74%), Postives = 88/167 (52.69%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQ-CSEWEEALAIFSQM-REEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 VFDRM + ++SWT L+T + + C+ EA+ +FS+M + PN FT SS +C L G+QV FK GL ++ + ++++ M+ K + +A FE +S + VS+ + G ++ E A +L + + + ++ TF +L ++ G + +G Sbjct: 327 VFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKG 493 HSP 4 Score: 77.411 bits (189), Expect = 5.441e-14 Identity = 44/156 (28.21%), Postives = 80/156 (51.28%), Query Frame = 1 Query: 10 RMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTG-LDTDKRIESALLDMYAKCGNISE-AVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471 R G+RD+VSW+ ++ + +A+ +F + E PN + ++V+ +C+ F+ GR KTG ++D + +L+DM+ K N E A +F+++S + V+WT +I+ Q G A++ F M G + + T V AC+ Sbjct: 125 RFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACA 280 HSP 5 Score: 72.4034 bits (176), Expect = 1.750e-12 Identity = 42/154 (27.27%), Postives = 78/154 (50.65%), Query Frame = 1 Query: 46 LVTAHSQCSEWEEALAIFSQMREEEFSP-NQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFE---RISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 L+ H + A++ M + P + T SS+L SC G+ VH+ + ++ D + ++L+ +Y+K G+ ++A +FE R D VSW+A+++ Y +G +A+++F +LG+ PN + V+ ACS+ V G Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVG 185
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PPR47_ARATH (Putative pentatricopeptide repeat-containing protein At1g17630 OS=Arabidopsis thaliana GN=PCMP-E72 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 7.802e-37 Identity = 72/180 (40.00%), Postives = 110/180 (61.11%), Query Frame = 1 Query: 25 DMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 ++V+WT+++ + +++L F QM+ + N TI +L CA L L+ GR++H +T + + +++AL++MYAKCG +SE ++FE I + D +SW +II GY HG +E AL +F RM G P+ + + VL ACSH GLVE+G F M ++FGL P EHYACI Sbjct: 398 NVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACI 577 HSP 2 Score: 94.7449 bits (234), Expect = 3.293e-19 Identity = 52/169 (30.77%), Postives = 88/169 (52.07%), Query Frame = 1 Query: 25 DMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQL----GVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQ 519 D V+WT++++ HSQC ++E+ L F MR + + ++ CA L L +VH K G + +AL+ +Y K G + +A +F +I N SW ++I+ + G + AL LF +E++ VK N VT+ V+ C+ G ++ L +F+QMQ Sbjct: 258 DEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQ 426 HSP 3 Score: 75.8702 bits (185), Expect = 1.583e-13 Identity = 43/165 (26.06%), Postives = 84/165 (50.91%), Query Frame = 1 Query: 25 DMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQ 519 D+ W +++ A+ +E AL ++ MR+ + + + + +L +C L R H+ + GL + + + LL +Y K G + +A +F + + +SW +I G++Q E+A+++F M++ KP+ VT+ VL S G E+ L +F M+ Sbjct: 122 DLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMR 286
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP214_ARATH (Putative pentatricopeptide repeat-containing protein At3g05240 OS=Arabidopsis thaliana GN=PCMP-E82 PE=3 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 7.802e-37 Identity = 77/189 (40.74%), Postives = 115/189 (60.85%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLG-VKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +FD M ER +VSW +++T +SQ + EEAL +F M + +P++ T SV+ + G+ +H+ KTG D I AL++MYAK G+ A FE + DT++WT +I G A HG AL +F+RM++ G P+ +T+L VL+ACSH GLVEEG +F +M++ GL P +EHY C+ Sbjct: 273 LFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCM 461 HSP 2 Score: 101.293 bits (251), Expect = 3.518e-21 Identity = 48/156 (30.77%), Postives = 85/156 (54.49%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFAC 468 VF+ + + W +++ +S ++AL + +M + +SP+ FT VL +C+GL + FG VH KTG + + + + LL MY CG ++ + +FE I + V+W ++ISG+ + +A++ FR M+ GVK N + +L AC Sbjct: 63 VFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVAC 218 HSP 3 Score: 89.7373 bits (221), Expect = 1.059e-17 Identity = 54/175 (30.86%), Postives = 93/175 (53.14%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIES----------ALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 VF+ + + ++V+W +L++ + + +A+ F +M+ N+ + +LV+C + G+ H F GL D +S +L+DMYAKCG++ A +F+ + VSW +II+GY+Q+G +E AL +F M LG+ P+ VTFL V+ A G + G Sbjct: 164 VFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHG--FLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLG 336
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 7.802e-37 Identity = 73/189 (38.62%), Postives = 116/189 (61.38%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMR-EEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 V + M ++D+V+W L++A+ Q + EAL +F +++ ++ NQ T+ S L +CA + L+ GR +HS K G+ + + SAL+ MY+KCG++ ++ +F + D W+A+I G A HG A+ +F +M++ VKPN VTF V ACSH GLV+E F QM+ +G+VP +HYACI Sbjct: 320 VLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACI 508 HSP 2 Score: 99.7525 bits (247), Expect = 1.024e-20 Identity = 59/197 (29.95%), Postives = 98/197 (49.75%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWT-------------------------------AIISGYAQHGLSENALQLFRRME-QLGVKPNSVTFLCVLFACSHGGLVEEG 495 VF + E+D+VSW +++ Q ++AL +F +M E+ + T+ VL +CA + L+FGRQV S + ++ + + +A+LDMY KCG+I +A +F+ + D V+WT A+IS Y Q+G AL +F ++ Q +K N +T + L AC+ G +E G Sbjct: 188 VFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG 384 HSP 3 Score: 96.2857 bits (238), Expect = 1.132e-19 Identity = 48/158 (30.38%), Postives = 89/158 (56.33%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQM-REEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471 VFD + + + +W TL+ A++ + ++ F M E + PN++T ++ + A + L G+ +H + K+ + +D + ++L+ Y CG++ A +F I D VSW ++I+G+ Q G + AL+LF++ME VK + VT + VL AC+ Sbjct: 86 VFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACA 243
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PPR62_ARATH (Pentatricopeptide repeat-containing protein At1g28690, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E34 PE=2 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.019e-36 Identity = 75/189 (39.68%), Postives = 121/189 (64.02%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEW-EEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +F+ +D+V + +V S+ E + ++ ++ M+ F PN T +SV+ +C+ L + G+QVH+ K+G+ T ++ S+LLDMYAKCG I++A +F+++ + SWT++I GY ++G E AL+LF RM++ ++PN VTFL L ACSH GLV++G F+ MQ + + P MEHYACI Sbjct: 228 IFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACI 416
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070 OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.019e-36 Identity = 69/190 (36.32%), Postives = 119/190 (62.63%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKT--GLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +F+R+ +D++SW TL+ ++ + ++EAL +F +M +PN T+ S+L +CA L +D GR +H K G+ + ++L+DMYAKCG+I A +F I + SW A+I G+A HG ++ + LF RM ++G++P+ +TF+ +L ACSH G+++ G H F+ M + + + P +EHY C+ Sbjct: 323 LFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCM 512 HSP 2 Score: 124.79 bits (312), Expect = 2.972e-28 Identity = 58/165 (35.15%), Postives = 99/165 (60.00%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 +FD + +D+VSW +++ +++ ++EAL +F M + P++ T+ +V+ +CA ++ GRQVH G ++ +I +AL+D+Y+KCG + A +FER+ D +SW +I GY L + AL LF+ M + G PN VT L +L AC+H G ++ G Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 386 HSP 3 Score: 93.5893 bits (231), Expect = 7.336e-19 Identity = 57/196 (29.08%), Postives = 91/196 (46.43%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSEN-------------------------------ALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 VF + E +++ W T+ H+ S+ AL ++ M PN +T VL SCA G+Q+H K G D D + ++L+ MY + G + +A +F++ + D VS+TA+I GYA G EN AL+LF+ M + V+P+ T + V+ AC+ G +E G Sbjct: 90 VFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 285
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP354_ARATH (Pentatricopeptide repeat-containing protein At4g37380, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.019e-36 Identity = 70/190 (36.84%), Postives = 123/190 (64.74%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREE-EFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQL-GVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +FD M ERD+VSW ++ ++Q +AL +F ++ E + P++ T+ + L +C+ + L+ GR +H + + + ++ + L+DMY+KCG++ EAV++F D V+W A+I+GYA HG S++AL+LF M+ + G++P +TF+ L AC+H GLV EG+ F+ M +++G+ P +EHY C+ Sbjct: 214 LFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCL 403 HSP 2 Score: 89.3521 bits (220), Expect = 1.384e-17 Identity = 57/197 (28.93%), Postives = 93/197 (47.21%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFER-------------------------------ISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLG-VKPNSVTFLCVLFACSHGGLVEEG 495 +F + + D+ +T + S ++A ++ Q+ E +PN+FT SS+L SC+ G+ +H+ K GL D + + L+D+YAK G++ A +F+R + D VSW +I GYAQHG +AL LF+++ G KP+ +T + L ACS G +E G Sbjct: 86 LFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS----TKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETG 278 The following BLAST results are available for this feature:
BLAST of CF504011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 212
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504011 ID=CF504011; Name=CF504011; organism=Citrus sinensis; type=EST; length=568bpback to top |