CF504011

Overview
NameCF504011
Unique NameCF504011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length568
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP165_ARATH (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana GN=PCMP-E78 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.019e-36
Identity = 69/188 (36.70%), Postives = 119/188 (63.30%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +F  M ++ +VSWT +++ ++    + EA+  F +M+     P++ ++ SVL SCA L  L+ G+ +H    + G      + +AL++MY+KCG IS+A+ +F ++   D +SW+ +ISGYA HG +  A++ F  M++  VKPN +TFL +L ACSH G+ +EGL +F  M++ + + P +EHY C+
Sbjct:  197 LFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCL 384          

HSP 2 Score: 78.9518 bits (193), Expect = 1.870e-14
Identity = 48/197 (24.37%), Postives = 95/197 (48.22%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFS-PNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSE-------------------------------NALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            +F+++   ++  + +++ A++  S + + + I+ Q+  + F  P++FT   +  SCA L     G+QVH    K G       E+AL+DMY K  ++ +A  +F+ +   D +SW +++SGYA+ G  +                                A+  FR M+  G++P+ ++ + VL +C+  G +E G
Sbjct:   64 LFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELG 260          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP265_ARATH (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.331e-36
Identity = 77/190 (40.53%), Postives = 113/190 (59.47%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREE--EFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            VF  M  R++VSW+ ++  +++  +  EAL  F +M  E  + SPN  T+ SVL +CA L  L+ G+ +H    + GLD+   + SAL+ MY +CG +     +F+R+ + D VSW ++IS Y  HG  + A+Q+F  M   G  P  VTF+ VL ACSH GLVEEG   F+ M    G+ P +EHYAC+
Sbjct:  239 VFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACM 428          

HSP 2 Score: 87.0409 bits (214), Expect = 6.867e-17
Identity = 58/190 (30.53%), Postives = 101/190 (53.16%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSC-AGLCFLDF---GRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRM--EQLGVKPNSVTFLCVLFACSHGGLVEEG--LHHFQQMQEKFGLVPVM 546
            VFD+  +R +  W  L  A +     EE L ++ +M       ++FT + VL +C A  C ++    G+++H+   + G  +   I + L+DMYA+ G +  A  +F  +   + VSW+A+I+ YA++G +  AL+ FR M  E     PNSVT + VL AC+    +E+G  +H +   +    ++PV+
Sbjct:  134 VFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVI 323          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP433_ARATH (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana GN=PCMP-E13 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 2.965e-36
Identity = 71/181 (39.23%), Postives = 115/181 (63.54%), Query Frame = 1
Query:   22 RDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            R+ VSWT +++ +++     EA+ +F +M  E   P++ T+ +VL +CA L  L+ G ++ S     G++    + +A++DMYAK GNI++A+ +FE ++  + V+WT II+G A HG    AL +F RM + GV+PN VTF+ +L ACSH G V+ G   F  M+ K+G+ P +EHY C+
Sbjct:  213 RNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCM 393          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP429_ARATH (Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 2.965e-36
Identity = 72/188 (38.30%), Postives = 117/188 (62.23%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +FD M +R++V+W+ ++  ++Q  E EEAL +F +   E  + N ++ SSV+  CA    L+ GRQ+H L  K+  D+   + S+L+ +Y+KCG    A  +F  +   +   W A++  YAQH  ++  ++LF+RM+  G+KPN +TFL VL ACSH GLV+EG ++F QM+E   + P  +HYA +
Sbjct:  173 MFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKES-RIEPTDKHYASL 359          

HSP 2 Score: 98.2117 bits (243), Expect = 2.979e-20
Identity = 53/164 (32.32%), Postives = 86/164 (52.44%), Query Frame = 1
Query:    4 FDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            F+   ++   +W+++++  +Q      +L    +M      P+   + S   SCA L   D GR VH L  KTG D D  + S+L+DMYAKCG I  A  +F+ +   + V+W+ ++ GYAQ G +E AL LF+      +  N  +F  V+  C++  L+E G
Sbjct:   73 FEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELG 236          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP172_ARATH (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 2.965e-36
Identity = 76/189 (40.21%), Postives = 114/189 (60.32%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGL-CFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            VF  + ++D+V+W+ ++  ++Q  E E A+ +F ++ +    PN+FT SS+L  CA     +  G+Q H    K+ LD+   + SALL MYAK GNI  A  +F+R    D VSW ++ISGYAQHG +  AL +F+ M++  VK + VTF+ V  AC+H GLVEEG  +F  M     + P  EH +C+
Sbjct:  450 VFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCM 638          

HSP 2 Score: 109.383 bits (272), Expect = 1.292e-23
Identity = 56/158 (35.44%), Postives = 95/158 (60.13%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSH 474
            VFD M ER++V+WTTL++ +++ S  +E L +F +M+ E   PN FT ++ L   A       G QVH++  K GLD    + ++L+++Y KCGN+ +A ++F++      V+W ++ISGYA +GL   AL +F  M    V+ +  +F  V+  C++
Sbjct:  150 VFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307          

HSP 3 Score: 106.301 bits (264), Expect = 1.094e-22
Identity = 52/149 (34.90%), Postives = 88/149 (59.06%), Query Frame = 1
Query:   25 DMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471
            ++VSWT +++   Q    EEA+ +FS+M+ +   PN+FT S +L +   +       +VH+   KT  +    + +ALLD Y K G + EA  +F  I + D V+W+A+++GYAQ G +E A+++F  + + G+KPN  TF  +L  C+
Sbjct:  361 NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVIS----PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCA 505          

HSP 4 Score: 99.3673 bits (246), Expect = 1.337e-20
Identity = 57/166 (34.34%), Postives = 87/166 (52.41%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGL 498
            +FD+   RD  S+ +L+   S+    +EA  +F  +       +    SSVL   A LC   FGRQ+H  C K G   D  + ++L+D Y K  N  +   +F+ +   + V+WT +ISGYA++ +++  L LF RM+  G +PNS TF   L     G L EEG+
Sbjct:   49 LFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAAL-----GVLAEEGV 209          

HSP 5 Score: 92.0485 bits (227), Expect = 2.135e-18
Identity = 52/156 (33.33%), Postives = 89/156 (57.05%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERIS-NPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFA 465
            +FD+   + +V+W ++++ ++      EAL +F  MR      ++ + +SV+  CA L  L F  Q+H    K G   D+ I +AL+  Y+KC  + +A+ +F+ I    + VSWTA+ISG+ Q+   E A+ LF  M++ GV+PN  T+  +L A
Sbjct:  251 LFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PPR60_ARATH (Pentatricopeptide repeat-containing protein At1g26900, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E54 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.872e-36
Identity = 78/190 (41.05%), Postives = 114/190 (60.00%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQ--LGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +FD    +D+V+W  ++  +++    EE + +  QM+ E+  PN  T   +L SCA       GR V  L  +  +  D  + +AL+DMYAK G + +AV IF R+ + D  SWTA+ISGY  HGL+  A+ LF +ME+    V+PN +TFL VL ACSHGGLV EG+  F++M E +   P +EHY C+
Sbjct:  284 IFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCV 473          

HSP 2 Score: 102.064 bits (253), Expect = 2.063e-21
Identity = 61/159 (38.36%), Postives = 89/159 (55.97%), Query Frame = 1
Query:    1 VFDRMGER-DMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSH 474
            VFD M +  D V+++TL+  + Q S+   AL +F  MR+ E   N  T+ S L + + L  L      H LC K GLD D  + +AL+ MY K G IS A  IF+     D V+W  +I  YA+ GL E  + L R+M+   +KPNS TF+ +L +C++
Sbjct:  182 VFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAY 340          

HSP 3 Score: 78.5666 bits (192), Expect = 2.442e-14
Identity = 44/161 (27.33%), Postives = 84/161 (52.17%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERI-SNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGG 480
            +F+ +   ++  + T++  +S   E E A ++F+Q+R +  + ++F+  + L SC+    +  G  +H +  ++G      + +AL+  Y  CG IS+A  +F+ +  + D V+++ +++GY Q      AL LFR M +  V  N  T L  L A S  G
Sbjct:   81 IFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLG 241          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP284_ARATH (Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana GN=PCMP-H80 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.872e-36
Identity = 69/188 (36.70%), Postives = 113/188 (60.11%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            VFD M  RD+VSW  ++   S      +AL+++ +M  E    + +T+ ++L SCA +  L+ G  +H +      ++   + +AL+DMYAKCG++  A+ +F  +   D ++W ++I GY  HG    A+  FR+M   GV+PN++TFL +L  CSH GLV+EG+ HF+ M  +F L P ++HY C+
Sbjct:  164 VFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCM 351          

HSP 2 Score: 67.781 bits (164), Expect = 4.311e-11
Identity = 39/155 (25.16%), Postives = 76/155 (49.03%), Query Frame = 1
Query:   37 WTTLVTAHSQCSEWEEALAIFSQMREEEFS-PNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGL 498
            W  L+   S  S    ++  +++M     S P+ FT +  L SC  +  +    ++H    ++G   D  + ++L+  Y+  G++  A  +F+ +   D VSW  +I  ++  GL   AL +++RM   GV  +S T + +L +C+H   +  G+
Sbjct:   74 WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGV 228          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP321_ARATH (Pentatricopeptide repeat-containing protein At4g18840 OS=Arabidopsis thaliana GN=PCMP-E101 PE=2 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 5.057e-36
Identity = 74/189 (39.15%), Postives = 116/189 (61.38%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFS-PNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            VFD M  RD+VSW  +VTA++    + E L +F++M ++    P+ FT+ SVL +CA L  L  G  VH    K G++ +  + +AL+DMY+KCG I +A+ +F   S  D  +W +IIS  + HGL ++AL++F  M   G KPN +TF+ VL AC+H G++++    F+ M   + + P +EHY C+
Sbjct:  259 VFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCM 447          

HSP 2 Score: 94.7449 bits (234), Expect = 3.293e-19
Identity = 54/172 (31.40%), Postives = 95/172 (55.23%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQM 516
            + +R+G  +  +  +++ A++  S  E AL +F +M      P++++ + VL +CA  C  + GRQ+H L  K+GL TD  +E+ L+++Y + G    A  + +R+   D VSW +++S Y + GL + A  LF  ME+  V+  S  F+   +A +  GLV+E    F  M
Sbjct:   96 ILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVE--SWNFMISGYAAA--GLVKEAKEVFDSM 263          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP411_ARATH (Pentatricopeptide repeat-containing protein At5g40410, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H15 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 6.605e-36
Identity = 68/188 (36.17%), Postives = 116/188 (61.70%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +F+ +  +++VSW T++  H Q    E+ LA F+  R     P+Q T  +VL SC  +  +   + +H L    G   +K I +ALLD+Y+K G + ++  +F  I++PD+++WTA+++ YA HG   +A++ F  M   G+ P+ VTF  +L ACSH GLVEEG H+F+ M +++ + P ++HY+C+
Sbjct:  191 LFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCM 378          

HSP 2 Score: 102.064 bits (253), Expect = 2.063e-21
Identity = 55/171 (32.16%), Postives = 96/171 (56.14%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEE--FSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVE--EGLH 501
            +FD M ERD+VSW +L++ +S      +   + S+M   E  F PN+ T  S++ +C      + GR +H L  K G+  + ++ +A ++ Y K G+++ +  +FE +S  + VSW  +I  + Q+GL+E  L  F    ++G +P+  TFL VL +C   G+V   +G+H
Sbjct:   88 LFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIH 258          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP367_ARATH (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 6.605e-36
Identity = 70/188 (37.23%), Postives = 119/188 (63.30%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +FD M  R++ +W+ ++  +++ + +E+A+ +F  M+ E    N+  + SV+ SCA L  L+FG + +    K+ +  +  + +AL+DM+ +CG+I +A+ +FE +   D++SW++II G A HG +  A+  F +M  LG  P  VTF  VL ACSHGGLVE+GL  ++ M++  G+ P +EHY CI
Sbjct:  205 MFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCI 392          

HSP 2 Score: 79.337 bits (194), Expect = 1.432e-14
Identity = 49/196 (25.00%), Postives = 90/196 (45.92%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSEN-------------------------------ALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            +F ++   ++  +  L+   S  +E  +A   ++QM +    P+  T   ++ + + +  +  G Q HS   + G   D  +E++L+ MYA CG I+ A  IF ++   D VSWT++++GY + G+ EN                               A+ LF  M++ GV  N    + V+ +C+H G +E G
Sbjct:   73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFG 268          
The following BLAST results are available for this feature:
BLAST of CF504011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 212
Match NameE-valueIdentityDescription
PP165_ARATH1.019e-3636.70Pentatricopeptide repeat-containing protein At2g20... [more]
PP265_ARATH1.331e-3640.53Pentatricopeptide repeat-containing protein At3g46... [more]
PP433_ARATH2.965e-3639.23Pentatricopeptide repeat-containing protein At5g56... [more]
PP429_ARATH2.965e-3638.30Putative pentatricopeptide repeat-containing prote... [more]
PP172_ARATH2.965e-3640.21Pentatricopeptide repeat-containing protein At2g27... [more]
PPR60_ARATH3.872e-3641.05Pentatricopeptide repeat-containing protein At1g26... [more]
PP284_ARATH3.872e-3636.70Pentatricopeptide repeat-containing protein At3g56... [more]
PP321_ARATH5.057e-3639.15Pentatricopeptide repeat-containing protein At4g18... [more]
PP411_ARATH6.605e-3636.17Pentatricopeptide repeat-containing protein At5g40... [more]
PP367_ARATH6.605e-3637.23Pentatricopeptide repeat-containing protein At5g06... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-499 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-12_C10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504011 ID=CF504011; Name=CF504011; organism=Citrus sinensis; type=EST; length=568bp
GTTTTTGACAGGATGGGGGAGAGAGATATGGTGTCTTGGACAACTCTTGT
GACTGCTCACTCTCAATGTTCTGAATGGGAGGAAGCACTTGCGATTTTTT
CCCAAATGAGGGAGGAAGAATTTAGTCCTAACCAGTTCACAATTTCCAGT
GTTCTTGTATCTTGTGCTGGCCTTTGTTTTCTAGATTTTGGTCGGCAAGT
TCATAGTCTTTGTTTCAAGACTGGGTTGGACACTGACAAGCGCATAGAAA
GTGCTTTGTTGGACATGTATGCCAAATGTGGCAATATAAGTGAGGCAGTG
ATGATATTTGAAAGGATTTCCAACCCTGATACTGTTTCATGGACAGCTAT
AATATCGGGTTATGCCCAGCACGGTCTCTCGGAAAATGCCCTTCAACTCT
TTAGAAGAATGGAACAGTTGGGTGTGAAGCCTAACTCTGTTACCTTTCTC
TGTGTTCTGTTTGCTTGCAGCCATGGAGGACTGGTAGAGGAAGGCCTGCA
CCATTTTCAACAAATGCAGGAAAAATTTGGTCTGGTGCCAGTGATGGAAC
ATTATGCTTGTATTGGTG
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