CF504011
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP313_ARATH (Pentatricopeptide repeat-containing protein At4g15720 OS=Arabidopsis thaliana GN=PCMP-H1 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 8.626e-36 Identity = 81/192 (42.19%), Postives = 119/192 (61.98%), Query Frame = 1 Query: 1 VFDRM--GERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSP--NQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 VFD M R++VSWT+++TA++Q + EA+ +F S NQF ++SV+ +C+ L L +G+ H L + G +++ + ++LLDMYAKCG++S A IF RI +S+T++I A+HGL E A++LF M + PN VT L VL ACSH GLV EGL + M EK+G+VP HY C+ Sbjct: 188 VFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCV 379 HSP 2 Score: 97.0561 bits (240), Expect = 6.636e-20 Identity = 52/170 (30.59%), Postives = 96/170 (56.47%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEE-FSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERI--SNPDTVSWTAIISGYAQHGLSENALQLFRRMEQ--LGVKPNSVTFLCVLFACSHGGLVEEG 495 +FD M E ++VSWT++++ ++ + + AL++F +M E+ PN++T +SV +C+ L G+ +H+ +GL + + S+L+DMY KC ++ A +F+ + + VSWT++I+ YAQ+ A++LFR + N V+ ACS G ++ G Sbjct: 86 LFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWG 255 HSP 3 Score: 68.1662 bits (165), Expect = 3.301e-11 Identity = 37/96 (38.54%), Postives = 53/96 (55.21%), Query Frame = 1 Query: 187 FGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRM-EQLGVKPNSVTFLCVLFACS 471 F +H+L K G +D + L+ Y K I+ A +F+ + P+ VSWT++ISGY G +NAL +F++M E V PN TF V ACS Sbjct: 47 FTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACS 142
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP333_ARATH (Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana GN=PCMP-E36 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.127e-35 Identity = 72/189 (38.10%), Postives = 115/189 (60.85%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRM-EQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +F+R+ +RD+VSW +++T +Q A+ IF QM + +IS+ L +CA L FG+ +H K L +D ES L+DMYAKCGN+ A+ +F+ + + VSW +II+ HG +++L LF M E+ G++P+ +TFL ++ +C H G V+EG+ F+ M E +G+ P EHYAC+ Sbjct: 498 IFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACV 686 HSP 2 Score: 123.25 bits (308), Expect = 8.646e-28 Identity = 58/153 (37.91%), Postives = 90/153 (58.82%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVL 459 +FDR+ ++D V W ++ +++C + + FS MR ++ SPN T VL CA +D G Q+H L +G+D + I+++LL MY+KCG +A +F +S DTV+W +ISGY Q GL E +L F M GV P+++TF +L Sbjct: 195 LFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLL 347 HSP 3 Score: 96.2857 bits (238), Expect = 1.132e-19 Identity = 49/153 (32.03%), Postives = 86/153 (56.21%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVL 459 +F M D V+W +++ + Q EE+L F +M P+ T SS+L S + L++ +Q+H + + D + SAL+D Y KC +S A IF + ++ D V +TA+ISGY +GL ++L++FR + ++ + PN +T + +L Sbjct: 296 LFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSIL 448 HSP 4 Score: 95.1301 bits (235), Expect = 2.521e-19 Identity = 51/158 (32.28%), Postives = 87/158 (55.06%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSH 474 +F + D+V +T +++ + + ++L +F + + + SPN+ T+ S+L L L GR++H K G D I A++DMYAKCG ++ A IFER+S D VSW ++I+ AQ A+ +FR+M G+ + V+ L AC++ Sbjct: 397 IFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACAN 554 HSP 5 Score: 69.3218 bits (168), Expect = 1.482e-11 Identity = 39/154 (25.32%), Postives = 77/154 (50.00%), Query Frame = 1 Query: 37 WTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGL 498 W +++++ + +ALA + +M SP+ T ++ +C L + G+D ++ + S+L+ Y + G I +F+R+ D V W +++GYA+ G ++ ++ F M + PN+VTF CVL C+ L++ G+ Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGV 259
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP316_ARATH (Pentatricopeptide repeat-containing protein At4g16835, mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 1.127e-35 Identity = 70/186 (37.63%), Postives = 111/186 (59.68%), Query Frame = 1 Query: 7 DRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 D +++V+W +++ + + S E+ L +F M EE PN +SS L+ C+ L L GRQ+H + K+ L D ++L+ MY KCG + +A +FE + D V+W A+ISGYAQHG ++ AL LFR M ++P+ +TF+ VL AC+H GLV G+ +F+ M + + P +HY C+ Sbjct: 242 DMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCM 427 HSP 2 Score: 73.559 bits (179), Expect = 7.857e-13 Identity = 51/166 (30.72%), Postives = 83/166 (50.00%), Query Frame = 1 Query: 4 FDRMGERDMVSWTTLVTAHSQCSEWEEALAIF-SQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERIS-NPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 FDRM +D SW T++T +++ E E+A +F S M + E S N + S + C L + S FK +A++ Y K + A +F+ ++ N + V+W A+ISGY ++ E+ L+LFR M + G++PNS L CS ++ G Sbjct: 147 FDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWN--AMISGYIECGDL-------EKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLG 303
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP255_ARATH (Putative pentatricopeptide repeat-containing protein At3g25970 OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 1.127e-35 Identity = 74/187 (39.57%), Postives = 118/187 (63.10%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNP-DTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYA 558 +F+ + +D++SW +++T +Q E+A+ FS +R E + + S++L SC+ L L G+Q+H+L K+G +++ + S+L+ MY+KCG I A F++IS+ TV+W A+I GYAQHGL + +L LF +M VK + VTF +L ACSH GL++EGL M+ + + P MEHYA Sbjct: 364 LFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYA 550 HSP 2 Score: 102.449 bits (254), Expect = 1.579e-21 Identity = 58/180 (32.22%), Postives = 95/180 (52.78%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRME-QLGVKPNSVTF-----------LCVLFACSHGGLVEEGLHH 504 +FD M +RD VSW T+++ ++ C + E+A +F+ M+ + ++ S +L A + D G QVH L K G + + + S+L+DMYAKC + +A F+ IS P++VSW A+I+G+ Q + A L ME + V ++ TF C L H +++ GL H Sbjct: 57 LFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQH 236 HSP 3 Score: 98.2117 bits (243), Expect = 2.979e-20 Identity = 50/160 (31.25%), Postives = 91/160 (56.88%), Query Frame = 1 Query: 1 VFDRMG-ERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAK--CGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471 VFD +G +D++SW +++ S+ E A +F QM+ + +T + +L +C+G FG+ +H + K GL+ +AL+ MY + G + +A+ +FE + + D +SW +II+G+AQ GLSE+A++ F + +K + F +L +CS Sbjct: 260 VFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCS 419 HSP 4 Score: 81.2629 bits (199), Expect = 3.768e-15 Identity = 49/178 (27.53%), Postives = 94/178 (52.81%), Query Frame = 1 Query: 4 FDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMR-EEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERI-SNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS-----------HGGLVEEGL 498 F + E + VSW L+ Q + + A + M + + + T + +L F + +QVH+ K GL + I +A++ YA CG++S+A +F+ + + D +SW ++I+G+++H L E+A +LF +M++ V+ + T+ +L ACS HG ++++GL Sbjct: 159 FKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGL 336
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP128_ARATH (Pentatricopeptide repeat-containing protein At1g77170 OS=Arabidopsis thaliana GN=PCMP-E21 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.127e-35 Identity = 78/190 (41.05%), Postives = 111/190 (58.42%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHS--LCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 VFD ER + SW ++ + EA+ +F M+ P+ FT+ SV SC GL L Q+H L KT +D + ++L+DMY KCG + A IFE + + VSW+++I GYA +G + AL+ FR+M + GV+PN +TF+ VL AC HGGLVEEG +F M+ +F L P + HY CI Sbjct: 174 VFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCI 363 HSP 2 Score: 67.0106 bits (162), Expect = 7.353e-11 Identity = 35/149 (23.49%), Postives = 73/149 (48.99%), Query Frame = 1 Query: 37 WTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGL 483 W ++ ++ + +A+ ++ M P+++++ V+ + + G+++HS+ + G D+ ES + +Y K G A +F+ SW AII G G + A+++F M++ G++P+ T + V +C GGL Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASC--GGL 231
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PPR48_ARATH (Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 1.471e-35 Identity = 73/188 (38.83%), Postives = 113/188 (60.11%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +FD M ++ +VSW T++T + Q + AL +F QM ++ V +C+ L L GR+ H+ K L+ D I +L+DMYAK G+I+++ +F + T SW A+I GY HGL++ A++LF M++ G P+ +TFL VL AC+H GL+ EGL + QM+ FGL P ++HYAC+ Sbjct: 553 LFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACV 740 HSP 2 Score: 98.2117 bits (243), Expect = 2.979e-20 Identity = 60/182 (32.97%), Postives = 95/182 (52.20%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEE----FSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLG--VKPNSVTFLCVLFACSHGGLVE--EGLHHFQQMQE 522 +FD M ER++VSW +++ S EE+ + +M EE F P+ T+ +VL CA + G+ VH K LD + + +AL+DMY+KCG I+ A MIF+ +N + VSW ++ G++ G + + R+M G VK + VT L + C H + + LH + QE Sbjct: 244 LFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQE 425 HSP 3 Score: 93.9745 bits (232), Expect = 5.617e-19 Identity = 46/157 (29.30%), Postives = 84/157 (53.50%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471 VF + + + SW L+ H+Q ++ +L QM+ P+ FT+ S+L +C+ L L G++VH + L+ D + ++L +Y CG + +F+ + + VSW +I+GY Q+G + AL +FR+M G++ ++ + V ACS Sbjct: 452 VFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 608 HSP 4 Score: 83.5741 bits (205), Expect = 7.592e-16 Identity = 48/162 (29.63%), Postives = 88/162 (54.32%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQM-REEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENA-LQLFRRMEQLG---VKPNSVTFLCVLFACS 471 VFD + +++ W +++++S+ ++E L F +M + P+ FT V+ +CAG+ + G VH L KTGL D + +AL+ Y G +++A+ +F+ + + VSW ++I ++ +G SE + L L ME+ G P+ T + VL C+ Sbjct: 142 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA 303 HSP 5 Score: 70.8626 bits (172), Expect = 5.092e-12 Identity = 44/159 (27.67%), Postives = 76/159 (47.80%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMRE--EEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471 +F +++VSW T+V S + + QM E+ ++ TI + + C FL +++H K ++ + +A + YAKCG++S A +F I + SW A+I G+AQ +L +M+ G+ P+S T +L ACS Sbjct: 349 IFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP195_ARATH (Pentatricopeptide repeat-containing protein At2g39620 OS=Arabidopsis thaliana GN=PCMP-E33 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.471e-35 Identity = 78/189 (41.27%), Postives = 114/189 (60.32%), Query Frame = 1 Query: 1 VFDRMG-ERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +FD+ G E+ VSW ++ + + EEA+A F QM+ E+F PN T +++ + A L L G VHS + G + + ++L+DMYAKCG I + F ISN VSW ++S YA HGL+ A+ LF M++ +KP+SV+FL VL AC H GLVEEG F++M E+ + +EHYAC+ Sbjct: 559 LFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACM 747 HSP 2 Score: 112.079 bits (279), Expect = 1.993e-24 Identity = 51/157 (32.48%), Postives = 91/157 (57.96%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471 +F + +RD+VSW+ ++ ++ Q + +EA+++F M PN T++SVL CAG+ G+ +H K ++++ +A++ MYAKCG S A+ FER+ D V++ A+ GY Q G + A +++ M+ GV P+S T + +L C+ Sbjct: 357 LFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCA 513 HSP 3 Score: 103.99 bits (258), Expect = 5.428e-22 Identity = 54/157 (34.39%), Postives = 88/157 (56.05%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471 VF+ + +D SW T++ A++ +EE L +F MR + N+ +S L + A + L G +H + GL D + ++L+ MY+KCG + A +F I + D VSW+A+I+ Y Q G + A+ LFR M ++ +KPN+VT VL C+ Sbjct: 256 VFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCA 412 HSP 4 Score: 91.2781 bits (225), Expect = 3.641e-18 Identity = 51/177 (28.81%), Postives = 94/177 (53.11%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEE-FSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFA-----------CSHGGLVEEG 495 +FD + + +V W +++ +++ EAL F M EE+ P++++ + L +CAG G ++H L + GL++D I +AL++MY K ++ A +F+++ D V+W ++SG AQ+G S AL LF M V + V+ ++ A C HG ++++G Sbjct: 55 IFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKG 231 HSP 5 Score: 87.4261 bits (215), Expect = 5.258e-17 Identity = 45/166 (27.11%), Postives = 90/166 (54.22%), Query Frame = 1 Query: 4 FDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERIS-NPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGL 498 F+R+ +D V++ L ++Q + +A ++ M+ P+ T+ +L +CA G V+ K G D++ + AL++M+ KC ++ A+++F++ TVSW +++GY HG +E A+ FR+M+ +PN+VTF+ ++ A + + G+ Sbjct: 459 FERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGM 624 HSP 6 Score: 81.2629 bits (199), Expect = 3.768e-15 Identity = 54/183 (29.51%), Postives = 88/183 (48.09%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG--LHHFQQMQEKFGLVPV 543 VFD+M +D+V+W T+V+ +Q AL +F MR + ++ +++ + + L D R +H L K G S L+DMY C ++ A +FE + D SW +++ YA +G E L+LF M V+ N V L A ++ G + +G +H + Q G V V Sbjct: 157 VFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIF--AFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSV 337
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PPR65_ARATH (Pentatricopeptide repeat-containing protein At1g31430 OS=Arabidopsis thaliana GN=PCMP-E55 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.922e-35 Identity = 72/188 (38.30%), Postives = 113/188 (60.11%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +F+R +D+V WT ++ + Q + ++EAL +F M+ P+ F + S+L CA L+ G+ +H + + DK + +AL+DMYAKCG I A+ +F I DT SWT++I G A +G+S AL L+ ME +GV+ +++TF+ VL AC+HGG V EG F M E+ + P EH +C+ Sbjct: 235 LFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCL 422 HSP 2 Score: 102.064 bits (253), Expect = 2.063e-21 Identity = 60/197 (30.46%), Postives = 101/197 (51.27%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEE-FSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCG-------------------------------NISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 VFD M +RD+VSW L++++ +E+A+ +F +M +E ++ TI S L +C+ L L+ G +++ T + RI +AL+DM+ KCG I EA ++FER D V WTA+++GY Q + AL+LFR M+ G++P++ + +L C+ G +E+G Sbjct: 103 VFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQG 298 HSP 3 Score: 82.0333 bits (201), Expect = 2.209e-15 Identity = 45/149 (30.20%), Postives = 79/149 (53.02%), Query Frame = 1 Query: 28 MVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQ-LGVKPNSVTFLCVLFACS 471 ++ + ++ + + + + LA+F ++R + P+ FT+ VL S L + G +VH K GL+ D + ++L+ MYA G I +F+ + D VSW +IS Y +G E+A+ +F+RM Q +K + T + L ACS Sbjct: 11 LLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACS 159
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP436_ARATH (Pentatricopeptide repeat-containing protein At5g59600 OS=Arabidopsis thaliana GN=PCMP-E1 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.922e-35 Identity = 73/180 (40.56%), Postives = 112/180 (62.22%), Query Frame = 1 Query: 25 DMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 D+VSWT++++ + E+A F QM PN TI ++L +C L ++ G+++H TGL+ + SALLDMY KCG ISEA+++F + TV++ ++I YA HGL++ A++LF +ME G K + +TF +L ACSH GL + G + F MQ K+ +VP +EHYAC+ Sbjct: 252 DVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACM 431 HSP 2 Score: 98.5969 bits (244), Expect = 2.281e-20 Identity = 50/158 (31.65%), Postives = 90/158 (56.96%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSH 474 VFD M +RD+ ++ A ++ ++E+L F +M ++ + F + S+L + L +FG+ +H L K ++D I S+L+DMY+K G + A +F + D V + A+ISGYA + ++ AL L + M+ LG+KP+ +T+ ++ SH Sbjct: 73 VFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSH 230
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP305_ARATH (Pentatricopeptide repeat-containing protein At4g08210 OS=Arabidopsis thaliana GN=PCMP-E100 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.922e-35 Identity = 68/188 (36.17%), Postives = 114/188 (60.64%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +F R+ +D+++++ L+ + A +F ++ + +QF +S++L C+ L L +G+Q+H LC K G +++ +AL+DMY KCG I V++F+ + D VSWT II G+ Q+G E A + F +M +G++PN VTFL +L AC H GL+EE + M+ ++GL P +EHY C+ Sbjct: 399 LFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCV 586 HSP 2 Score: 99.3673 bits (246), Expect = 1.337e-20 Identity = 57/166 (34.34%), Postives = 96/166 (57.83%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMRE-EEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 VFD M ER++V+WTT+V+ ++ + +A+ ++ +M + EE + N+F S+VL +C + + G V+ K L D + ++++DMY K G + EA F+ I P + SW +ISGY + GL + A+ LF RM Q PN V++ C++ G V++G Sbjct: 62 VFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQ----PNVVSWNCLI-----SGFVDKG 218 HSP 3 Score: 78.9518 bits (193), Expect = 1.870e-14 Identity = 43/145 (29.66%), Postives = 75/145 (51.72%), Query Frame = 1 Query: 37 WTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471 W ++++ E E AL + Q+ + + + +T+S L C L G QVHSL +G + D + S L+D++A GNI +A +F R+ N D ++++ +I G + G + A LFR + +LG+ + +L CS Sbjct: 310 WNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCS 454 The following BLAST results are available for this feature:
BLAST of CF504011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 212
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504011 ID=CF504011; Name=CF504011; organism=Citrus sinensis; type=EST; length=568bpback to top |