CF504011

Overview
NameCF504011
Unique NameCF504011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length568
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP228_ARATH (Pentatricopeptide repeat-containing protein At3g13880 OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 1.922e-35
Identity = 67/187 (35.83%), Postives = 109/187 (58.29%), Query Frame = 1
Query:    4 FDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            F    ++D+ SWT+++  H Q  + E A  +F Q+      P ++T+S ++ +CA    L  G Q+     K+G+D    ++++ + MYAK GN+  A  +F  + NPD  +++A+IS  AQHG +  AL +F  M+  G+KPN   FL VL AC HGGLV +GL +FQ M+  + + P  +H+ C+
Sbjct:  416 FASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCL 602          

HSP 2 Score: 115.161 bits (287), Expect = 2.355e-25
Identity = 57/169 (33.73%), Postives = 97/169 (57.40%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS---HGGLVEEGL 498
            +FDRM ER+++S+ +L++ ++Q   +E+A+ +F + RE     ++FT +  L  C   C LD G  +H L    GL     + + L+DMY+KCG + +A+ +F+R    D VSW ++ISGY + G +E  L L  +M + G+   +     VL AC    + G +E+G+
Sbjct:  104 LFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGM 272          

HSP 3 Score: 103.605 bits (257), Expect = 7.089e-22
Identity = 58/173 (33.53%), Postives = 97/173 (56.07%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCA---GLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQ-----HGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            +FDR  ERD VSW +L++ + +    EE L + ++M  +  +   + + SVL +C       F++ G  +H    K G++ D  + +ALLDMYAK G++ EA+ +F  + + + V++ A+ISG+ Q        S  A +LF  M++ G++P+  TF  VL ACS    +E G
Sbjct:  205 LFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYG 377          

HSP 4 Score: 90.8929 bits (224), Expect = 4.755e-18
Identity = 48/170 (28.24%), Postives = 87/170 (51.18%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEW-----EEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            +F  M  +++V++  +++   Q  E       EA  +F  M+     P+  T S VL +C+    L++GRQ+H+L  K    +D+ I SAL+++YA  G+  + +  F   S  D  SWT++I  + Q+   E+A  LFR++    ++P   T   ++ AC+    +  G
Sbjct:  309 LFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSG 478          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PPR85_ARATH (Pentatricopeptide repeat-containing protein At1g59720, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 2.510e-35
Identity = 76/193 (39.38%), Postives = 118/193 (61.14%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHS-LCFKTGLDT--DKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRM--EQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            VFD M ER +VSW +++ A  +  E++ AL +F +M +  F P+ +T+ SVL +CAGL  L  G   H+ L  K  +D   D  ++++L++MY KCG++  A  +F+ +   D  SW A+I G+A HG +E A+  F RM  ++  V+PNSVTF+ +L AC+H G V +G  +F  M   + + P +EHY CI
Sbjct:  208 VFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCI 399          

HSP 2 Score: 86.6557 bits (213), Expect = 8.968e-17
Identity = 55/167 (32.93%), Postives = 83/167 (49.70%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQ-CSEWEEALAIFSQMREE-EFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            VFD +       W TL+ A +   S  EEA  ++ +M E  E SP++ T   VL +CA +     G+QVH    K G   D  + + L+ +Y  CG +  A  +F+ +     VSW ++I    + G  ++ALQLFR M Q   +P+  T   VL AC+  G +  G
Sbjct:  105 VFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLG 270          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP410_ARATH (Putative pentatricopeptide repeat-containing protein At5g40405 OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.510e-35
Identity = 71/188 (37.77%), Postives = 113/188 (60.11%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +F+ M ERD ++W  +++ ++Q  E  EAL +F  M+ E    N   + SVL +C  L  LD GR  HS   +  +    R+ + L+D+YAKCG++ +A+ +F  +   +  +W++ ++G A +G  E  L+LF  M+Q GV PN+VTF+ VL  CS  G V+EG  HF  M+ +FG+ P +EHY C+
Sbjct:  196 LFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCL 383          

HSP 2 Score: 91.2781 bits (225), Expect = 3.641e-18
Identity = 51/198 (25.76%), Postives = 95/198 (47.98%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREE--EFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYA-------------------------------KCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            + DR  +  + +  +++ AH +    E++   + ++     +  P+ +T++ ++ +C GL   + G QVH +  + G D D  +++ L+ +YA                               +CG++  A  +FE +   D ++W A+ISGYAQ G S  AL +F  M+  GVK N V  + VL AC+  G +++G
Sbjct:   62 ILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQG 259          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP377_ARATH (Putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.510e-35
Identity = 70/188 (37.23%), Postives = 106/188 (56.38%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +F  +  ++ VSW T++  +    E  +A ++F +    + S  + T SS L +CA L  +D G QVH L  KT       + ++L+DMYAKCG+I  A  +F  +   D  SW A+ISGY+ HGL   AL++   M+    KPN +TFL VL  CS+ GL+++G   F+ M    G+ P +EHY C+
Sbjct:  405 LFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCM 592          

HSP 2 Score: 108.997 bits (271), Expect = 1.687e-23
Identity = 60/158 (37.97%), Postives = 86/158 (54.43%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCA-GLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACS 471
            VF+ M + D+V W+ ++    Q     EA+ +F +MRE    PN+FT+SS+L  CA G C    G Q+H L  K G D D  + +AL+D+YAKC  +  AV +F  +S+ + VSW  +I GY   G    A  +FR   +  V    VTF   L AC+
Sbjct:  304 VFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCS-GLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACA 460          

HSP 3 Score: 97.8265 bits (242), Expect = 3.890e-20
Identity = 51/159 (32.08%), Postives = 84/159 (52.83%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHG 477
            VF+ +  +D+V W  +V+ + +   +E++L + S MR   F PN +T  + L +  GL   DF + VH    KT    D R+   LL +Y + G++S+A  +F  +   D V W+ +I+ + Q+G    A+ LF RM +  V PN  T   +L  C+ G
Sbjct:  203 VFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIG 361          

HSP 4 Score: 78.9518 bits (193), Expect = 1.870e-14
Identity = 45/149 (30.20%), Postives = 77/149 (51.68%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTF 447
            +FD M ER+ VS+ TL   ++     ++ + ++S++  E    N    +S L     L   +    +HS   K G D++  + +AL++ Y+ CG++  A  +FE I   D V W  I+S Y ++G  E++L+L   M   G  PN+ TF
Sbjct:  106 LFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTF 250          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP355_ARATH (Pentatricopeptide repeat-containing protein At4g38010 OS=Arabidopsis thaliana GN=PCMP-E45 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.510e-35
Identity = 75/190 (39.47%), Postives = 112/190 (58.95%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEE-FSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEK-FGLVPVMEHYACI 564
            VF  + ++D VSW ++++    C   +EA+ +FS M+      P+   ++SVL +CA L  +D GR VH      G+  D  I +A++DMYAKCG I  A+ IF  I + +  +W A++ G A HG    +L+ F  M +LG KPN VTFL  L AC H GLV+EG  +F +M+ + + L P +EHY C+
Sbjct:  261 VFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCM 450          

HSP 2 Score: 102.449 bits (254), Expect = 1.579e-21
Identity = 61/166 (36.75%), Postives = 88/166 (53.01%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRME-QLGVKPNSVTFLCVLFACSHGGLVEEG 495
            VF  M  RD+VSWT ++T  ++   ++EAL  FS+M  E   PN  T   VLVS   +  L  G+ +H L  K          +AL+DMY KC  +S+A+ +F  +   D VSW ++ISG      S+ A+ LF  M+   G+KP+      VL AC+  G V+ G
Sbjct:  163 VFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVE---PNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHG 325          

HSP 3 Score: 90.1225 bits (222), Expect = 8.111e-18
Identity = 47/158 (29.75%), Postives = 82/158 (51.90%), Query Frame = 1
Query:   34 SWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVE--EGLH 501
            S+ TL+++++ C +    +  +       FSP+ FT   V  +C     +  G+Q+H +  K G   D  ++++L+  Y  CG    A  +F  +   D VSWT II+G+ + GL + AL  F +M+   V+PN  T++CVL +    G +   +G+H
Sbjct:   73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIH 227          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP169_ARATH (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.510e-35
Identity = 69/186 (37.10%), Postives = 113/186 (60.75%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYA 558
            +FD M E+D+V W  ++    Q    ++ALA+F +M+     P++ T+   L +C+ L  LD G  +H    K  L  +  + ++L+DMYAKCGNISEA+ +F  I   +++++TAII G A HG +  A+  F  M   G+ P+ +TF+ +L AC HGG+++ G  +F QM+ +F L P ++HY+
Sbjct:  345 LFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYS 530          

HSP 2 Score: 103.99 bits (258), Expect = 5.428e-22
Identity = 60/197 (30.46%), Postives = 98/197 (49.75%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGL-------------------------------SENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGL 498
            VFD    RD+VSW  L+  + +  E E+A+ ++  M  E   P+  T+  ++ SC+ L  L+ G++ +    + GL     + +AL+DM++KCG+I EA  IF+ +     VSWT +ISGYA+ GL                                ++AL LF+ M+    KP+ +T +  L ACS  G ++ G+
Sbjct:  213 VFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGI 409          

HSP 3 Score: 87.0409 bits (214), Expect = 6.867e-17
Identity = 46/169 (27.22%), Postives = 84/169 (49.70%), Query Frame = 1
Query:   25 DMVSWTTLVTAHSQCSEWEEALAIFSQMREE---EFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQE 522
            ++ SW   +   S+    +E+  ++ QM      E  P+ FT   +   CA L     G  +     K  L+    + +A + M+A CG++  A  +F+     D VSW  +I+GY + G +E A+ +++ ME  GVKP+ VT + ++ +CS  G +  G   ++ ++E
Sbjct:  117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKE 285          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP148_ARATH (Pentatricopeptide repeat-containing protein At2g04860 OS=Arabidopsis thaliana GN=PCMP-E74 PE=2 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 2.510e-35
Identity = 69/187 (36.90%), Postives = 114/187 (60.96%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMR-EEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYA 558
            +F+++ E  ++SW ++++   Q      A  +F QM       P+  TI+S+L  C+ LC L+ G+++H    +   + +  + +AL+DMYAKCGN  +A  +F+ I  P T +W ++ISGY+  GL   AL  +  M + G+KP+ +TFL VL AC+HGG V+EG   F+ M ++FG+ P ++HYA
Sbjct:  354 LFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYA 540          

HSP 2 Score: 109.383 bits (272), Expect = 1.292e-23
Identity = 53/155 (34.19%), Postives = 90/155 (58.06%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFA 465
            +FD M ERD V W  L+  +S+     +A  +F  M ++ FSP+  T+ ++L  C    F+  GR VH +  K+GL+ D ++++AL+  Y+KC  +  A ++F  + +  TVSW  +I  Y+Q GL E A+ +F+ M +  V+ + VT + +L A
Sbjct:   57 LFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA 211          

HSP 3 Score: 77.411 bits (189), Expect = 5.441e-14
Identity = 38/149 (25.50%), Postives = 78/149 (52.35%), Query Frame = 1
Query:   28 MVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQL-GVKPNSVTFLCVLFACS 471
            +V  T++V+ +++  + + A+  FS+ R+     +   +  +L  C     +D G  +H    K+GL T   + + L+ MY+K  ++   + +FE++     +SW ++ISG  Q G +  A ++F +M    G+ P+++T   +L  CS
Sbjct:  262 IVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCS 410          

HSP 4 Score: 74.7146 bits (182), Expect = 3.527e-13
Identity = 44/166 (26.51%), Postives = 82/166 (49.40%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGL 498
            +F  M ++  VSW T++ A+SQ    EEA+ +F  M E+    +  TI ++L +            +H L  K G+  D  + ++L+  Y++CG +  A  ++        V  T+I+S YA+ G  + A+  F +  QL +K ++V  + +L  C     ++ G+
Sbjct:  158 LFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVS------HEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGM 317          

HSP 5 Score: 69.3218 bits (168), Expect = 1.482e-11
Identity = 36/100 (36.00%), Postives = 60/100 (60.00%), Query Frame = 1
Query:  196 QVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            QV +   K+GLD    ++++LL++Y K G ++ A M+F+ +   DTV W A+I GY+++G   +A +LF  M Q G  P++ T + +L  C   G V +G
Sbjct:   21 QVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 120          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP406_ARATH (Pentatricopeptide repeat-containing protein At5g39680 OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.278e-35
Identity = 78/188 (41.49%), Postives = 115/188 (61.17%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            VFD    +++   TT++ A+ Q   +EEAL +FS+M  +E  PN++T + +L S A L  L  G  +H L  K+G      + +AL++MYAK G+I +A   F  ++  D V+W  +ISG + HGL   AL+ F RM   G  PN +TF+ VL ACSH G VE+GLH+F Q+ +KF + P ++HY CI
Sbjct:  294 VFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCI 481          

HSP 2 Score: 74.7146 bits (182), Expect = 3.527e-13
Identity = 46/165 (27.88%), Postives = 80/165 (48.48%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            V D +   D+  +++ ++ + +C  ++E L +  +   E+F  N  T  S L   + L  L+   QVHS   + G + +     AL++MY KCG +  A  +F+     +    T I+  Y Q    E AL LF +M+   V PN  TF  +L + +   L+++G
Sbjct:  193 VLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQG 357          

HSP 3 Score: 71.2478 bits (173), Expect = 3.899e-12
Identity = 42/154 (27.27%), Postives = 76/154 (49.35%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMR-EEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVL 459
            +FD M ER++VSW  ++  +       E L +F  M    E  PN+F  + V  SC+    ++ G+Q H    K GL + + + + L+ MY+ C    EA+ + + +   D   +++ +SGY + G  +  L + R+        N++T+L  L
Sbjct:   91 LFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSL 244          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP227_ARATH (Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.278e-35
Identity = 75/190 (39.47%), Postives = 117/190 (61.58%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRM-EQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQM-QEKFGLVPVMEHYACI 564
            +F+ + ERD+VS T ++  ++Q    EEAL +F ++  E  SPN  T +S+L + +GL  LD G+Q H    +  L     ++++L+DMY+KCGN+S A  +F+ +     +SW A++ GY++HGL    L+LFR M ++  VKP++VT L VL  CSHG + + GL+ F  M   ++G  P  EHY CI
Sbjct:  210 IFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCI 399          

HSP 2 Score: 141.354 bits (355), Expect = 3.068e-33
Identity = 73/165 (44.24%), Postives = 102/165 (61.82%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            V D M E+++VSWT +++ +SQ     EAL +F++M   +  PN+FT ++VL SC     L  G+Q+H L  K   D+   + S+LLDMYAK G I EA  IFE +   D VS TAII+GYAQ GL E AL++F R+   G+ PN VT+  +L A S   L++ G
Sbjct:  109 VLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHG 273          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP185_ARATH (Pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E15 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 3.278e-35
Identity = 75/191 (39.27%), Postives = 122/191 (63.87%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQM-REEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFER--ISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +FDRM E++++SWTT++T + +  E EEAL +FS+M R+    PN  T  S+L +C+ L  L  G+Q+H L  K+    ++ + SALL+MY+K G +  A  +F+   +   D +SW ++I+ YA HG  + A++++ +M + G KP++VT+L +LFACSH GLVE+G+  F+ +     L    EHY C+
Sbjct:  286 LFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCL 476          
The following BLAST results are available for this feature:
BLAST of CF504011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 212
Match NameE-valueIdentityDescription
PP228_ARATH1.922e-3535.83Pentatricopeptide repeat-containing protein At3g13... [more]
PPR85_ARATH2.510e-3539.38Pentatricopeptide repeat-containing protein At1g59... [more]
PP410_ARATH2.510e-3537.77Putative pentatricopeptide repeat-containing prote... [more]
PP377_ARATH2.510e-3537.23Putative pentatricopeptide repeat-containing prote... [more]
PP355_ARATH2.510e-3539.47Pentatricopeptide repeat-containing protein At4g38... [more]
PP169_ARATH2.510e-3537.10Pentatricopeptide repeat-containing protein At2g22... [more]
PP148_ARATH2.510e-3536.90Pentatricopeptide repeat-containing protein At2g04... [more]
PP406_ARATH3.278e-3541.49Pentatricopeptide repeat-containing protein At5g39... [more]
PP227_ARATH3.278e-3539.47Putative pentatricopeptide repeat-containing prote... [more]
PP185_ARATH3.278e-3539.27Pentatricopeptide repeat-containing protein At2g35... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-499 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-12_C10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504011 ID=CF504011; Name=CF504011; organism=Citrus sinensis; type=EST; length=568bp
GTTTTTGACAGGATGGGGGAGAGAGATATGGTGTCTTGGACAACTCTTGT
GACTGCTCACTCTCAATGTTCTGAATGGGAGGAAGCACTTGCGATTTTTT
CCCAAATGAGGGAGGAAGAATTTAGTCCTAACCAGTTCACAATTTCCAGT
GTTCTTGTATCTTGTGCTGGCCTTTGTTTTCTAGATTTTGGTCGGCAAGT
TCATAGTCTTTGTTTCAAGACTGGGTTGGACACTGACAAGCGCATAGAAA
GTGCTTTGTTGGACATGTATGCCAAATGTGGCAATATAAGTGAGGCAGTG
ATGATATTTGAAAGGATTTCCAACCCTGATACTGTTTCATGGACAGCTAT
AATATCGGGTTATGCCCAGCACGGTCTCTCGGAAAATGCCCTTCAACTCT
TTAGAAGAATGGAACAGTTGGGTGTGAAGCCTAACTCTGTTACCTTTCTC
TGTGTTCTGTTTGCTTGCAGCCATGGAGGACTGGTAGAGGAAGGCCTGCA
CCATTTTCAACAAATGCAGGAAAAATTTGGTCTGGTGCCAGTGATGGAAC
ATTATGCTTGTATTGGTG
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