CF504011

Overview
NameCF504011
Unique NameCF504011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length568
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP257_ARATH (Pentatricopeptide repeat-containing protein At3g26630, chloroplastic OS=Arabidopsis thaliana GN=PCMP-A6 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.627e-34
Identity = 70/189 (37.04%), Postives = 119/189 (62.96%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRM-EQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            VF++M  R++VSWT ++TA+ +    +EA  +F +M+ ++  PN+FTI ++L +   L  L  GR VH    K G   D  + +AL+DMY+KCG++ +A  +F+ +      +W ++I+    HG  E AL LF  M E+  V+P+++TF+ VL AC++ G V++GL +F +M + +G+ P+ EH AC+
Sbjct:  207 VFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACM 395          

HSP 2 Score: 77.7962 bits (190), Expect = 4.166e-14
Identity = 53/197 (26.90%), Postives = 87/197 (44.16%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSP-NQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCG-------------------------------NISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            VF+++      +W  ++ + S   +  EAL +F  M     S  ++FT   V+ +C     +  G QVH L  K G   D   ++ L+D+Y KCG                                +  A ++F ++   + VSWTA+I+ Y ++   + A QLFRRM+   VKPN  T + +L A +  G +  G
Sbjct:   74 VFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMG 270          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PPR70_ARATH (Pentatricopeptide repeat-containing protein At1g33350 OS=Arabidopsis thaliana GN=PCMP-E57 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.125e-34
Identity = 69/192 (35.94%), Postives = 117/192 (60.94%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQM-REEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLG---VKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +F+ M ERD+ SW  ++ A +Q   + EA+++F +M  E    PN+ T+  VL +CA    L   + +H+  ++  L +D  + ++L+D+Y KCGN+ EA  +F+  S     +W ++I+ +A HG SE A+ +F  M +L    +KP+ +TF+ +L AC+HGGLV +G  +F  M  +FG+ P +EHY C+
Sbjct:  215 LFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCL 406          

HSP 2 Score: 72.7886 bits (177), Expect = 1.340e-12
Identity = 38/89 (42.70%), Postives = 57/89 (64.04%), Query Frame = 1
Query:  250 SALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRM-EQLGVKPNSVTFLCVLFACSHGGLVE--EGLHHF 507
            +A+L  YA+ G+IS AV +FE +   D  SW AI++   Q+GL   A+ LFRRM  +  ++PN VT +CVL AC+  G ++  +G+H F
Sbjct:  197 TAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAF 285          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP435_ARATH (Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E41 PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.125e-34
Identity = 72/188 (38.30%), Postives = 111/188 (59.04%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +F  +  +D V WT ++    +  E  +AL +F +M+ E  S N+FT   VL +C+ L  L+ GR VHS      ++    + +AL++MY++CG+I+EA  +F  + + D +S+  +ISG A HG S  A+  FR M   G +PN VT + +L ACSHGGL++ GL  F  M+  F + P +EHY CI
Sbjct:  211 LFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCI 398          

HSP 2 Score: 79.7221 bits (195), Expect = 1.096e-14
Identity = 53/206 (25.73%), Postives = 91/206 (44.17%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGL-------------------------------DTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG--LHHFQQMQ 519
            VF  +   ++  +T ++          + ++++ +M      P+ + I+SVL +C     L   R++H+   K G                                D D    + +++ Y++CG I EA+ +F+ +   DTV WTA+I G  ++     AL+LFR M+   V  N  T +CVL ACS  G +E G  +H F + Q
Sbjct:   83 VFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD----LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQ 284          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP259_ARATH (Putative pentatricopeptide repeat-containing protein At3g28640 OS=Arabidopsis thaliana GN=PCMP-E79 PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.125e-34
Identity = 69/190 (36.32%), Postives = 117/190 (61.58%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTG-LDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRME-QLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            VFD + + D+V W  L+  + +C    E L +F +M  +   P++F++++ L +CA +  L  G+ +H    K   +++D  + +AL+DMYAKCG I  AV +F++++  +  SW A+I GYA +G ++ A+    R+E + G+KP+SV  L VL AC+HGG +EEG    + M+ ++ + P  EHY+CI
Sbjct:  174 VFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCI 363          

HSP 2 Score: 88.1965 bits (217), Expect = 3.082e-17
Identity = 48/175 (27.43%), Postives = 90/175 (51.43%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQM---REEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLD-TDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG--LHHF 507
            +FD +   +   + T++   S+ S+    L  F  M    EE+ +P+  T   ++V+C   CF   G+Q+H    K G+  +D  +++ +L +Y +   + +A  +F+ I  PD V W  +++GY + GL    L++FR M   G++P+  +    L AC+  G + +G  +H F
Sbjct:   69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEF 243          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP261_ARATH (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.775e-34
Identity = 66/190 (34.74%), Postives = 116/190 (61.05%), Query Frame = 1
Query:    1 VFDRMG--ERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +FD+M    +++V+WT ++  +++    +EA  +  QM       +   + S+L +C     L  G ++HS+  ++ L ++  + +ALLDMYAKCGN+ +A  +F  I   D VSW  ++ G   HG  + A++LF RM + G++P+ VTF+ VL +C+H GL++EG+ +F  M++ + LVP +EHY C+
Sbjct:  269 MFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCL 458          

HSP 2 Score: 85.5001 bits (210), Expect = 1.998e-16
Identity = 45/141 (31.91%), Postives = 84/141 (59.57%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCG--NISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQ 417
            VF+++ E ++    +L+ AH+Q S+  +A  +FS+M+      + FT   +L +C+G  +L   + +H+   K GL +D  + +AL+D Y++CG   + +A+ +FE++S  DTVSW +++ G  + G   +A +LF  M Q
Sbjct:   73 VFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQ 213          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP232_ARATH (Putative pentatricopeptide repeat-containing protein At3g15130 OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.775e-34
Identity = 64/187 (34.22%), Postives = 116/187 (62.03%), Query Frame = 1
Query:    4 FDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            FD++ E+ M+SW++L+  ++Q  E+ EA+ +F +++E     + F +SS++   A    L  G+Q+ +L  K     +  + ++++DMY KCG + EA   F  +   D +SWT +I+GY +HGL + ++++F  M +  ++P+ V +L VL ACSH G+++EG   F ++ E  G+ P +EHYAC+
Sbjct:  270 FDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACV 456          

HSP 2 Score: 126.331 bits (316), Expect = 1.021e-28
Identity = 64/173 (36.99%), Postives = 102/173 (58.96%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVK--PNSVTFLCVLFACSHGGLVEEG--LHHF 507
            VFD M ER++VSW+ L++ H    + + +L++FS+M  +   PN+FT S+ L +C  L  L+ G Q+H  C K G +    + ++L+DMY+KCG I+EA  +F RI +   +SW A+I+G+   G    AL  F  M++  +K  P+  T   +L ACS  G++  G  +H F
Sbjct:   63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGF 235          

HSP 3 Score: 93.5893 bits (231), Expect = 7.336e-19
Identity = 50/177 (28.25%), Postives = 94/177 (53.11%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFS--PNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLD--TDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQ 519
            VF R+ +R ++SW  ++          +AL  F  M+E      P++FT++S+L +C+    +  G+Q+H    ++G    +   I  +L+D+Y KCG +  A   F++I     +SW+++I GYAQ G    A+ LF+R+++L  + +S     ++   +   L+ +G    +QMQ
Sbjct:  164 VFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQG----KQMQ 336          

HSP 4 Score: 71.633 bits (174), Expect = 2.985e-12
Identity = 43/125 (34.40%), Postives = 64/125 (51.20%), Query Frame = 1
Query:  127 PNQF-TISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGL 498
            PNQ   + S+L  C      D G QVH    K+G   +    + L+DMY KC     A  +F+ +   + VSW+A++SG+  +G  + +L LF  M + G+ PN  TF   L AC     +E+GL
Sbjct:    3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PPR13_ARATH (Pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Arabidopsis thaliana GN=PDE247 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.624e-34
Identity = 70/188 (37.23%), Postives = 109/188 (57.98%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +FD+M ERD++SWT ++    +    EEAL  F +M+     P+   I + L +C  L  L FG  VH          + R+ ++L+D+Y +CG +  A  +F  +     VSW ++I G+A +G +  +L  FR+M++ G KP++VTF   L ACSH GLVEEGL +FQ M+  + + P +EHY C+
Sbjct:  162 MFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCL 349          

HSP 2 Score: 69.707 bits (169), Expect = 1.134e-11
Identity = 49/190 (25.79%), Postives = 82/190 (43.16%), Query Frame = 1
Query:   31 VSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLD--FGRQVHSLCFKTGLDTDK-RIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQL-------------------------------FRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGL 498
            VSWT+ +   ++     EA   FS M      PN  T  ++L  C          G  +H    K GLD +   + +A++ MY+K G   +A ++F+ + + ++V+W  +I GY + G  +NA ++                               FR M+  GVKP+ V  +  L AC++ G +  GL
Sbjct:   37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGL 226          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP385_ARATH (Pentatricopeptide repeat-containing protein At5g15300 OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 3.624e-34
Identity = 71/193 (36.79%), Postives = 118/193 (61.14%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTG-----LDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +FDR  E+D+V+W  +++ +  C   +EAL IF +MR+    P+  TI S+L +CA L  L+ G+++H    +T      +     I +AL+DMYAKCG+I  A+ +F  + + D  +W  +I G A H  +E ++++F  M++L V PN VTF+ V+ ACSH G V+EG  +F  M++ + + P ++HY C+
Sbjct:  231 LFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCM 422          

HSP 2 Score: 69.3218 bits (168), Expect = 1.482e-11
Identity = 34/137 (24.82%), Postives = 78/137 (56.93%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRM 411
            +FD + + D+     ++   +Q  + E+ ++++++M +   SP+++T + VL +C+ L +   G   H    + G   ++ +++AL+  +A CG++  A  +F+  +    V+W+++ SGYA+ G  + A++LF  M
Sbjct:   68 LFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEM 204          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP303_ARATH (Pentatricopeptide repeat-containing protein At4g04370 OS=Arabidopsis thaliana GN=PCMP-E99 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.624e-34
Identity = 69/189 (36.51%), Postives = 115/189 (60.85%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSP-NQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +F+RM ERD+VSW  +++ ++Q  +  +AL +F +M+ +     + FT+ S+L +C+    L  G+ +H +  ++ +     +++AL+DMY+KCG +  A   F+ IS  D VSW  +I+GY  HG  + AL+++      G++PN V FL VL +CSH G+V++GL  F  M   FG+ P  EH AC+
Sbjct:  403 IFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACV 591          

HSP 2 Score: 113.62 bits (283), Expect = 6.851e-25
Identity = 58/165 (35.15%), Postives = 89/165 (53.94%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495
            +FD+M +RDMVSW T+++ ++      E L +  +MR +   P+Q T  + L     +C L+ GR +H    KTG D D  +++AL+ MY KCG    +  + E I N D V WT +ISG  + G +E AL +F  M Q G   +S     V+ +C+  G  + G
Sbjct:  201 LFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLG 365          

HSP 3 Score: 107.842 bits (268), Expect = 3.759e-23
Identity = 61/166 (36.75%), Postives = 95/166 (57.23%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKP-NSVTFLCVLFACSHGGLVEEG 495
            V + +  +D+V WT +++   +    E+AL +FS+M +     +   I+SV+ SCA L   D G  VH    + G   D    ++L+ MYAKCG++ ++++IFER++  D VSW AIISGYAQ+     AL LF  M+   V+  +S T + +L ACS  G +  G
Sbjct:  302 VLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVG 467          

HSP 4 Score: 88.5817 bits (218), Expect = 2.360e-17
Identity = 46/149 (30.87%), Postives = 82/149 (55.03%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTF 447
            VF+ M ERD+V WT ++  +S+     EA ++ ++MR +   P   T+  +L   +G+  +   + +H      G D D  + +++L++Y KC ++ +A  +F+++   D VSW  +ISGYA  G     L+L  RM   G++P+  TF
Sbjct:  103 VFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEML---SGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTF 248          

HSP 5 Score: 87.0409 bits (214), Expect = 6.867e-17
Identity = 47/133 (35.34%), Postives = 71/133 (53.38%), Query Frame = 1
Query:   61 SQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVL 459
            S   + ++ L+ FS M   +  P+ FT  S+L +CA L  L FG  +H      G  +D  I S+L+++YAK G ++ A  +FE +   D V WTA+I  Y++ G+   A  L   M   G+KP  VT L +L
Sbjct:   22 SSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEML 154          
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP271_ARATH (Putative pentatricopeptide repeat-containing protein At3g49140 OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.733e-34
Identity = 68/188 (36.17%), Postives = 117/188 (62.23%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564
            +F +MG++ +VSW  ++  + + +   EA+ ++S+M  + F P+  +I+SVL +C     L  G+++H    +  L  +  +E+AL+DMYAKCG + +A  +FE + + D VSWTA+IS Y   G   +A+ LF +++  G+ P+S+ F+  L ACSH GL+EEG   F+ M + + + P +EH AC+
Sbjct:  265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACM 452          

HSP 2 Score: 91.2781 bits (225), Expect = 3.641e-18
Identity = 52/189 (27.51%), Postives = 98/189 (51.85%), Query Frame = 1
Query:    1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACIG 567
            VFD + ER+++    ++ ++     + E + +F  M      P+ +T   VL +C+    +  GR++H    K GL +   + + L+ MY KCG +SEA ++ + +S  D VSW +++ GYAQ+   ++AL++ R ME + +  ++ T   +L A S+     E + + + M  K G   ++     IG
Sbjct:   96 VFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSN--TTTENVMYVKDMFFKMGKKSLVSWNVMIG 282          
The following BLAST results are available for this feature:
BLAST of CF504011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 212
Match NameE-valueIdentityDescription
PP257_ARATH1.627e-3437.04Pentatricopeptide repeat-containing protein At3g26... [more]
PPR70_ARATH2.125e-3435.94Pentatricopeptide repeat-containing protein At1g33... [more]
PP435_ARATH2.125e-3438.30Putative pentatricopeptide repeat-containing prote... [more]
PP259_ARATH2.125e-3436.32Putative pentatricopeptide repeat-containing prote... [more]
PP261_ARATH2.775e-3434.74Pentatricopeptide repeat-containing protein At3g29... [more]
PP232_ARATH2.775e-3434.22Putative pentatricopeptide repeat-containing prote... [more]
PPR13_ARATH3.624e-3437.23Pentatricopeptide repeat-containing protein At1g05... [more]
PP385_ARATH3.624e-3436.79Pentatricopeptide repeat-containing protein At5g15... [more]
PP303_ARATH3.624e-3436.51Pentatricopeptide repeat-containing protein At4g04... [more]
PP271_ARATH4.733e-3436.17Putative pentatricopeptide repeat-containing prote... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-499 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-12_C10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504011 ID=CF504011; Name=CF504011; organism=Citrus sinensis; type=EST; length=568bp
GTTTTTGACAGGATGGGGGAGAGAGATATGGTGTCTTGGACAACTCTTGT
GACTGCTCACTCTCAATGTTCTGAATGGGAGGAAGCACTTGCGATTTTTT
CCCAAATGAGGGAGGAAGAATTTAGTCCTAACCAGTTCACAATTTCCAGT
GTTCTTGTATCTTGTGCTGGCCTTTGTTTTCTAGATTTTGGTCGGCAAGT
TCATAGTCTTTGTTTCAAGACTGGGTTGGACACTGACAAGCGCATAGAAA
GTGCTTTGTTGGACATGTATGCCAAATGTGGCAATATAAGTGAGGCAGTG
ATGATATTTGAAAGGATTTCCAACCCTGATACTGTTTCATGGACAGCTAT
AATATCGGGTTATGCCCAGCACGGTCTCTCGGAAAATGCCCTTCAACTCT
TTAGAAGAATGGAACAGTTGGGTGTGAAGCCTAACTCTGTTACCTTTCTC
TGTGTTCTGTTTGCTTGCAGCCATGGAGGACTGGTAGAGGAAGGCCTGCA
CCATTTTCAACAAATGCAGGAAAAATTTGGTCTGGTGCCAGTGATGGAAC
ATTATGCTTGTATTGGTG
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