CF504011
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP257_ARATH (Pentatricopeptide repeat-containing protein At3g26630, chloroplastic OS=Arabidopsis thaliana GN=PCMP-A6 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 1.627e-34 Identity = 70/189 (37.04%), Postives = 119/189 (62.96%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRM-EQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 VF++M R++VSWT ++TA+ + +EA +F +M+ ++ PN+FTI ++L + L L GR VH K G D + +AL+DMY+KCG++ +A +F+ + +W ++I+ HG E AL LF M E+ V+P+++TF+ VL AC++ G V++GL +F +M + +G+ P+ EH AC+ Sbjct: 207 VFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACM 395 HSP 2 Score: 77.7962 bits (190), Expect = 4.166e-14 Identity = 53/197 (26.90%), Postives = 87/197 (44.16%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSP-NQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCG-------------------------------NISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 VF+++ +W ++ + S + EAL +F M S ++FT V+ +C + G QVH L K G D ++ L+D+Y KCG + A ++F ++ + VSWTA+I+ Y ++ + A QLFRRM+ VKPN T + +L A + G + G Sbjct: 74 VFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMG 270
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PPR70_ARATH (Pentatricopeptide repeat-containing protein At1g33350 OS=Arabidopsis thaliana GN=PCMP-E57 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.125e-34 Identity = 69/192 (35.94%), Postives = 117/192 (60.94%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQM-REEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLG---VKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +F+ M ERD+ SW ++ A +Q + EA+++F +M E PN+ T+ VL +CA L + +H+ ++ L +D + ++L+D+Y KCGN+ EA +F+ S +W ++I+ +A HG SE A+ +F M +L +KP+ +TF+ +L AC+HGGLV +G +F M +FG+ P +EHY C+ Sbjct: 215 LFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCL 406 HSP 2 Score: 72.7886 bits (177), Expect = 1.340e-12 Identity = 38/89 (42.70%), Postives = 57/89 (64.04%), Query Frame = 1 Query: 250 SALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRM-EQLGVKPNSVTFLCVLFACSHGGLVE--EGLHHF 507 +A+L YA+ G+IS AV +FE + D SW AI++ Q+GL A+ LFRRM + ++PN VT +CVL AC+ G ++ +G+H F Sbjct: 197 TAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAF 285
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP435_ARATH (Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E41 PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.125e-34 Identity = 72/188 (38.30%), Postives = 111/188 (59.04%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +F + +D V WT ++ + E +AL +F +M+ E S N+FT VL +C+ L L+ GR VHS ++ + +AL++MY++CG+I+EA +F + + D +S+ +ISG A HG S A+ FR M G +PN VT + +L ACSHGGL++ GL F M+ F + P +EHY CI Sbjct: 211 LFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCI 398 HSP 2 Score: 79.7221 bits (195), Expect = 1.096e-14 Identity = 53/206 (25.73%), Postives = 91/206 (44.17%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGL-------------------------------DTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG--LHHFQQMQ 519 VF + ++ +T ++ + ++++ +M P+ + I+SVL +C L R++H+ K G D D + +++ Y++CG I EA+ +F+ + DTV WTA+I G ++ AL+LFR M+ V N T +CVL ACS G +E G +H F + Q Sbjct: 83 VFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD----LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQ 284
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP259_ARATH (Putative pentatricopeptide repeat-containing protein At3g28640 OS=Arabidopsis thaliana GN=PCMP-E79 PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.125e-34 Identity = 69/190 (36.32%), Postives = 117/190 (61.58%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTG-LDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRME-QLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 VFD + + D+V W L+ + +C E L +F +M + P++F++++ L +CA + L G+ +H K +++D + +AL+DMYAKCG I AV +F++++ + SW A+I GYA +G ++ A+ R+E + G+KP+SV L VL AC+HGG +EEG + M+ ++ + P EHY+CI Sbjct: 174 VFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCI 363 HSP 2 Score: 88.1965 bits (217), Expect = 3.082e-17 Identity = 48/175 (27.43%), Postives = 90/175 (51.43%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQM---REEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLD-TDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG--LHHF 507 +FD + + + T++ S+ S+ L F M EE+ +P+ T ++V+C CF G+Q+H K G+ +D +++ +L +Y + + +A +F+ I PD V W +++GY + GL L++FR M G++P+ + L AC+ G + +G +H F Sbjct: 69 IFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEF 243
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP261_ARATH (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.775e-34 Identity = 66/190 (34.74%), Postives = 116/190 (61.05%), Query Frame = 1 Query: 1 VFDRMG--ERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +FD+M +++V+WT ++ +++ +EA + QM + + S+L +C L G ++HS+ ++ L ++ + +ALLDMYAKCGN+ +A +F I D VSW ++ G HG + A++LF RM + G++P+ VTF+ VL +C+H GL++EG+ +F M++ + LVP +EHY C+ Sbjct: 269 MFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCL 458 HSP 2 Score: 85.5001 bits (210), Expect = 1.998e-16 Identity = 45/141 (31.91%), Postives = 84/141 (59.57%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCG--NISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQ 417 VF+++ E ++ +L+ AH+Q S+ +A +FS+M+ + FT +L +C+G +L + +H+ K GL +D + +AL+D Y++CG + +A+ +FE++S DTVSW +++ G + G +A +LF M Q Sbjct: 73 VFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQ 213
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP232_ARATH (Putative pentatricopeptide repeat-containing protein At3g15130 OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.775e-34 Identity = 64/187 (34.22%), Postives = 116/187 (62.03%), Query Frame = 1 Query: 4 FDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 FD++ E+ M+SW++L+ ++Q E+ EA+ +F +++E + F +SS++ A L G+Q+ +L K + + ++++DMY KCG + EA F + D +SWT +I+GY +HGL + ++++F M + ++P+ V +L VL ACSH G+++EG F ++ E G+ P +EHYAC+ Sbjct: 270 FDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACV 456 HSP 2 Score: 126.331 bits (316), Expect = 1.021e-28 Identity = 64/173 (36.99%), Postives = 102/173 (58.96%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVK--PNSVTFLCVLFACSHGGLVEEG--LHHF 507 VFD M ER++VSW+ L++ H + + +L++FS+M + PN+FT S+ L +C L L+ G Q+H C K G + + ++L+DMY+KCG I+EA +F RI + +SW A+I+G+ G AL F M++ +K P+ T +L ACS G++ G +H F Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGF 235 HSP 3 Score: 93.5893 bits (231), Expect = 7.336e-19 Identity = 50/177 (28.25%), Postives = 94/177 (53.11%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFS--PNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLD--TDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQ 519 VF R+ +R ++SW ++ +AL F M+E P++FT++S+L +C+ + G+Q+H ++G + I +L+D+Y KCG + A F++I +SW+++I GYAQ G A+ LF+R+++L + +S ++ + L+ +G +QMQ Sbjct: 164 VFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQG----KQMQ 336 HSP 4 Score: 71.633 bits (174), Expect = 2.985e-12 Identity = 43/125 (34.40%), Postives = 64/125 (51.20%), Query Frame = 1 Query: 127 PNQF-TISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGL 498 PNQ + S+L C D G QVH K+G + + L+DMY KC A +F+ + + VSW+A++SG+ +G + +L LF M + G+ PN TF L AC +E+GL Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PPR13_ARATH (Pentatricopeptide repeat-containing protein At1g05750, chloroplastic OS=Arabidopsis thaliana GN=PDE247 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.624e-34 Identity = 70/188 (37.23%), Postives = 109/188 (57.98%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +FD+M ERD++SWT ++ + EEAL F +M+ P+ I + L +C L L FG VH + R+ ++L+D+Y +CG + A +F + VSW ++I G+A +G + +L FR+M++ G KP++VTF L ACSH GLVEEGL +FQ M+ + + P +EHY C+ Sbjct: 162 MFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCL 349 HSP 2 Score: 69.707 bits (169), Expect = 1.134e-11 Identity = 49/190 (25.79%), Postives = 82/190 (43.16%), Query Frame = 1 Query: 31 VSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLD--FGRQVHSLCFKTGLDTDK-RIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQL-------------------------------FRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGL 498 VSWT+ + ++ EA FS M PN T ++L C G +H K GLD + + +A++ MY+K G +A ++F+ + + ++V+W +I GY + G +NA ++ FR M+ GVKP+ V + L AC++ G + GL Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGL 226
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP385_ARATH (Pentatricopeptide repeat-containing protein At5g15300 OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 3.624e-34 Identity = 71/193 (36.79%), Postives = 118/193 (61.14%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTG-----LDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +FDR E+D+V+W +++ + C +EAL IF +MR+ P+ TI S+L +CA L L+ G+++H +T + I +AL+DMYAKCG+I A+ +F + + D +W +I G A H +E ++++F M++L V PN VTF+ V+ ACSH G V+EG +F M++ + + P ++HY C+ Sbjct: 231 LFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCM 422 HSP 2 Score: 69.3218 bits (168), Expect = 1.482e-11 Identity = 34/137 (24.82%), Postives = 78/137 (56.93%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRM 411 +FD + + D+ ++ +Q + E+ ++++++M + SP+++T + VL +C+ L + G H + G ++ +++AL+ +A CG++ A +F+ + V+W+++ SGYA+ G + A++LF M Sbjct: 68 LFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEM 204
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP303_ARATH (Pentatricopeptide repeat-containing protein At4g04370 OS=Arabidopsis thaliana GN=PCMP-E99 PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.624e-34 Identity = 69/189 (36.51%), Postives = 115/189 (60.85%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSP-NQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +F+RM ERD+VSW +++ ++Q + +AL +F +M+ + + FT+ S+L +C+ L G+ +H + ++ + +++AL+DMY+KCG + A F+ IS D VSW +I+GY HG + AL+++ G++PN V FL VL +CSH G+V++GL F M FG+ P EH AC+ Sbjct: 403 IFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACV 591 HSP 2 Score: 113.62 bits (283), Expect = 6.851e-25 Identity = 58/165 (35.15%), Postives = 89/165 (53.94%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEG 495 +FD+M +RDMVSW T+++ ++ E L + +MR + P+Q T + L +C L+ GR +H KTG D D +++AL+ MY KCG + + E I N D V WT +ISG + G +E AL +F M Q G +S V+ +C+ G + G Sbjct: 201 LFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLG 365 HSP 3 Score: 107.842 bits (268), Expect = 3.759e-23 Identity = 61/166 (36.75%), Postives = 95/166 (57.23%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKP-NSVTFLCVLFACSHGGLVEEG 495 V + + +D+V WT +++ + E+AL +FS+M + + I+SV+ SCA L D G VH + G D ++L+ MYAKCG++ ++++IFER++ D VSW AIISGYAQ+ AL LF M+ V+ +S T + +L ACS G + G Sbjct: 302 VLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVG 467 HSP 4 Score: 88.5817 bits (218), Expect = 2.360e-17 Identity = 46/149 (30.87%), Postives = 82/149 (55.03%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTF 447 VF+ M ERD+V WT ++ +S+ EA ++ ++MR + P T+ +L +G+ + + +H G D D + +++L++Y KC ++ +A +F+++ D VSW +ISGYA G L+L RM G++P+ TF Sbjct: 103 VFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEML---SGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTF 248 HSP 5 Score: 87.0409 bits (214), Expect = 6.867e-17 Identity = 47/133 (35.34%), Postives = 71/133 (53.38%), Query Frame = 1 Query: 61 SQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVL 459 S + ++ L+ FS M + P+ FT S+L +CA L L FG +H G +D I S+L+++YAK G ++ A +FE + D V WTA+I Y++ G+ A L M G+KP VT L +L Sbjct: 22 SSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEML 154
BLAST of CF504011 vs. ExPASy Swiss-Prot
Match: PP271_ARATH (Putative pentatricopeptide repeat-containing protein At3g49140 OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 4.733e-34 Identity = 68/188 (36.17%), Postives = 117/188 (62.23%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACI 564 +F +MG++ +VSW ++ + + + EA+ ++S+M + F P+ +I+SVL +C L G+++H + L + +E+AL+DMYAKCG + +A +FE + + D VSWTA+IS Y G +A+ LF +++ G+ P+S+ F+ L ACSH GL+EEG F+ M + + + P +EH AC+ Sbjct: 265 MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACM 452 HSP 2 Score: 91.2781 bits (225), Expect = 3.641e-18 Identity = 52/189 (27.51%), Postives = 98/189 (51.85%), Query Frame = 1 Query: 1 VFDRMGERDMVSWTTLVTAHSQCSEWEEALAIFSQMREEEFSPNQFTISSVLVSCAGLCFLDFGRQVHSLCFKTGLDTDKRIESALLDMYAKCGNISEAVMIFERISNPDTVSWTAIISGYAQHGLSENALQLFRRMEQLGVKPNSVTFLCVLFACSHGGLVEEGLHHFQQMQEKFGLVPVMEHYACIG 567 VFD + ER+++ ++ ++ + E + +F M P+ +T VL +C+ + GR++H K GL + + + L+ MY KCG +SEA ++ + +S D VSW +++ GYAQ+ ++AL++ R ME + + ++ T +L A S+ E + + + M K G ++ IG Sbjct: 96 VFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSN--TTTENVMYVKDMFFKMGKKSLVSWNVMIG 282 The following BLAST results are available for this feature:
BLAST of CF504011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 212
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504011 ID=CF504011; Name=CF504011; organism=Citrus sinensis; type=EST; length=568bpback to top |