CF504193
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504193 vs. ExPASy Swiss-Prot
Match: H2B4_WHEAT (Histone H2B.4 OS=Triticum aestivum GN=TH153 PE=1 SV=3) HSP 1 Score: 162.925 bits (411), Expect = 7.760e-40 Identity = 82/92 (89.13%), Postives = 88/92 (95.65%), Query Frame = 1 Query: 232 SIETYKIYIFKVLKQVHPDIGISSKGMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 507 S+ETYKIYIFKVLKQVHPDIGISSK M I NSFINDIFEKLA E+++LARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTS+ Sbjct: 44 SMETYKIYIFKVLKQVHPDIGISSKAMSITNSFINDIFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 135
BLAST of CF504193 vs. ExPASy Swiss-Prot
Match: H2B4_CHLRE (Histone H2B.4 OS=Chlamydomonas reinhardtii PE=1 SV=3) HSP 1 Score: 161.77 bits (408), Expect = 1.729e-39 Identity = 79/91 (86.81%), Postives = 87/91 (95.60%), Query Frame = 1 Query: 232 SIETYKIYIFKVLKQVHPDIGISSKGMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 504 ++ETYK+YI+KVLKQVHPD GISSK M IMNSFINDIFEK+A EAS+L+RYNKKPT+TSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS Sbjct: 62 AVETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 152
BLAST of CF504193 vs. ExPASy Swiss-Prot
Match: H2B3_CHLRE (Histone H2B.3 OS=Chlamydomonas reinhardtii PE=1 SV=3) HSP 1 Score: 161.77 bits (408), Expect = 1.729e-39 Identity = 79/91 (86.81%), Postives = 87/91 (95.60%), Query Frame = 1 Query: 232 SIETYKIYIFKVLKQVHPDIGISSKGMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 504 ++ETYK+YI+KVLKQVHPD GISSK M IMNSFINDIFEK+A EAS+L+RYNKKPT+TSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS Sbjct: 62 AVETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 152
BLAST of CF504193 vs. ExPASy Swiss-Prot
Match: H2B2_CHLRE (Histone H2B.2 OS=Chlamydomonas reinhardtii PE=1 SV=3) HSP 1 Score: 161.77 bits (408), Expect = 1.729e-39 Identity = 79/91 (86.81%), Postives = 87/91 (95.60%), Query Frame = 1 Query: 232 SIETYKIYIFKVLKQVHPDIGISSKGMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 504 ++ETYK+YI+KVLKQVHPD GISSK M IMNSFINDIFEK+A EAS+L+RYNKKPT+TSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS Sbjct: 65 AVETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 155
BLAST of CF504193 vs. ExPASy Swiss-Prot
Match: H2B1_CHLRE (Histone H2B.1 OS=Chlamydomonas reinhardtii GN=H2B PE=1 SV=3) HSP 1 Score: 161.77 bits (408), Expect = 1.729e-39 Identity = 79/91 (86.81%), Postives = 87/91 (95.60%), Query Frame = 1 Query: 232 SIETYKIYIFKVLKQVHPDIGISSKGMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 504 ++ETYK+YI+KVLKQVHPD GISSK M IMNSFINDIFEK+A EAS+L+RYNKKPT+TSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS Sbjct: 62 AVETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 152
BLAST of CF504193 vs. ExPASy Swiss-Prot
Match: H2B4_VOLCA (Histone H2B.4 OS=Volvox carteri PE=3 SV=3) HSP 1 Score: 160.614 bits (405), Expect = 3.851e-39 Identity = 79/90 (87.78%), Postives = 86/90 (95.56%), Query Frame = 1 Query: 238 ETYKIYIFKVLKQVHPDIGISSKGMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 507 ETYK+YI+KVLKQVHPD GISSK M IMNSFINDIFEK+A EAS+L+RYNKKPT+TSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+ Sbjct: 66 ETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 155
BLAST of CF504193 vs. ExPASy Swiss-Prot
Match: H2B3_VOLCA (Histone H2B.3 OS=Volvox carteri PE=3 SV=3) HSP 1 Score: 160.614 bits (405), Expect = 3.851e-39 Identity = 79/90 (87.78%), Postives = 86/90 (95.56%), Query Frame = 1 Query: 238 ETYKIYIFKVLKQVHPDIGISSKGMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 507 ETYK+YI+KVLKQVHPD GISSK M IMNSFINDIFEK+A EAS+L+RYNKKPT+TSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS+ Sbjct: 68 ETYKLYIYKVLKQVHPDTGISSKAMSIMNSFINDIFEKVATEASKLSRYNKKPTVTSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSA 157
BLAST of CF504193 vs. ExPASy Swiss-Prot
Match: H2B_PEA (Histone H2B (Fragments) OS=Pisum sativum GN=HIS2B PE=1 SV=2) HSP 1 Score: 154.066 bits (388), Expect = 3.605e-37 Identity = 79/88 (89.77%), Postives = 81/88 (92.05%), Query Frame = 1 Query: 241 TYKIYIFKVLKQVHPDIGISSKGMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 504 T KIYIFKVLKQVHPDIGISSK MGIMNSFINDIFEKLA EASRLARYNKK TIT REIQTAVRL+LPGE+AKH VSE TKAVTKFTS Sbjct: 31 TVKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASEASRLARYNKKSTITPREIQTAVRLLLPGEVAKHKVSEATKAVTKFTS 118
BLAST of CF504193 vs. ExPASy Swiss-Prot
Match: H2B3B_MOUSE (Histone H2B type 3-B OS=Mus musculus GN=Hist3h2bb PE=1 SV=3) HSP 1 Score: 154.066 bits (388), Expect = 3.605e-37 Identity = 74/90 (82.22%), Postives = 84/90 (93.33%), Query Frame = 1 Query: 238 ETYKIYIFKVLKQVHPDIGISSKGMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 507 E+Y IY++KVLKQVHPD GISSK MGIMNSF+NDIFE++A EASRLA YNK+ TITSRE+QTAVRL+LPGELAKHAVSEGTKAVTK+TSS Sbjct: 36 ESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIASEASRLAHYNKRSTITSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 125
BLAST of CF504193 vs. ExPASy Swiss-Prot
Match: H2B3B_HUMAN (Histone H2B type 3-B OS=Homo sapiens GN=HIST3H2BB PE=1 SV=3) HSP 1 Score: 154.066 bits (388), Expect = 3.605e-37 Identity = 74/90 (82.22%), Postives = 84/90 (93.33%), Query Frame = 1 Query: 238 ETYKIYIFKVLKQVHPDIGISSKGMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 507 E+Y IY++KVLKQVHPD GISSK MGIMNSF+NDIFE++A EASRLA YNK+ TITSRE+QTAVRL+LPGELAKHAVSEGTKAVTK+TSS Sbjct: 36 ESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIASEASRLAHYNKRSTITSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 125 The following BLAST results are available for this feature:
BLAST of CF504193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 205
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504193 ID=CF504193; Name=CF504193; organism=Citrus sinensis; type=EST; length=515bpback to top |