CF504193
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504193 vs. ExPASy Swiss-Prot
Match: H2B_GOSHI (Histone H2B OS=Gossypium hirsutum GN=HIS2B PE=2 SV=3) HSP 1 Score: 178.718 bits (452), Expect = 1.367e-44 Identity = 92/103 (89.32%), Postives = 94/103 (91.26%), Query Frame = 1 Query: 199 SGDXXXXXXXXSIETYKIYIFKVLKQVHPDIGISSKGMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 507 +GD S+ETYKIYIFKVLKQVHPDIGISSK MGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 45 AGDKKKKRVKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
BLAST of CF504193 vs. ExPASy Swiss-Prot
Match: H2B3_SOLLC (Histone H2B.3 (Fragment) OS=Solanum lycopersicum GN=H2B-3 PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 3.044e-44 Identity = 91/103 (88.35%), Postives = 94/103 (91.26%), Query Frame = 1 Query: 199 SGDXXXXXXXXSIETYKIYIFKVLKQVHPDIGISSKGMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 507 +GD ++ETYKIYIFKVLKQVHPDIGISSK MGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 35 AGDKKKKRSKKAVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 137
BLAST of CF504193 vs. ExPASy Swiss-Prot
Match: H2B11_ARATH (Histone H2B.11 OS=Arabidopsis thaliana GN=At5g59910 PE=1 SV=5) HSP 1 Score: 177.178 bits (448), Expect = 3.976e-44 Identity = 91/102 (89.22%), Postives = 93/102 (91.18%), Query Frame = 1 Query: 202 GDXXXXXXXXSIETYKIYIFKVLKQVHPDIGISSKGMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 507 GD S+ETYKIYIFKVLKQVHPDIGISSK MGIMNSFINDIFEKLAQEAS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 49 GDKKKKMKKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150
BLAST of CF504193 vs. ExPASy Swiss-Prot
Match: H2B_CAPAN (Histone H2B OS=Capsicum annuum GN=HIS2B PE=2 SV=3) HSP 1 Score: 176.022 bits (445), Expect = 8.858e-44 Identity = 90/92 (97.83%), Postives = 91/92 (98.91%), Query Frame = 1 Query: 232 SIETYKIYIFKVLKQVHPDIGISSKGMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 507 SIETYKIYIFKVLKQVHPDIGISSK MGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 54 SIETYKIYIFKVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 145
BLAST of CF504193 vs. ExPASy Swiss-Prot
Match: H2B3_MEDTR (Probable histone H2B.3 OS=Medicago truncatula PE=3 SV=3) HSP 1 Score: 176.022 bits (445), Expect = 8.858e-44 Identity = 90/103 (87.38%), Postives = 93/103 (90.29%), Query Frame = 1 Query: 199 SGDXXXXXXXXSIETYKIYIFKVLKQVHPDIGISSKGMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 507 S D S+ETYKIYIFKVLKQVHPDIG+SSK MGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 36 SSDKKKKRTKKSVETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 138
BLAST of CF504193 vs. ExPASy Swiss-Prot
Match: H2B1_MEDTR (Probable histone H2B.1 OS=Medicago truncatula PE=3 SV=3) HSP 1 Score: 176.022 bits (445), Expect = 8.858e-44 Identity = 90/103 (87.38%), Postives = 94/103 (91.26%), Query Frame = 1 Query: 199 SGDXXXXXXXXSIETYKIYIFKVLKQVHPDIGISSKGMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 507 +G+ S+ETYKIYIFKVLKQVHPDIGISSK MGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 46 AGEKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
BLAST of CF504193 vs. ExPASy Swiss-Prot
Match: H2B1_ARATH (Histone H2B.1 OS=Arabidopsis thaliana GN=At1g07790 PE=1 SV=3) HSP 1 Score: 175.252 bits (443), Expect = 1.511e-43 Identity = 89/103 (86.41%), Postives = 94/103 (91.26%), Query Frame = 1 Query: 199 SGDXXXXXXXXSIETYKIYIFKVLKQVHPDIGISSKGMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 507 +GD ++ETYKIYIFKVLKQVHPDIGISSK MGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 46 AGDKKKKRSKKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
BLAST of CF504193 vs. ExPASy Swiss-Prot
Match: H2B7_ARATH (Histone H2B.7 OS=Arabidopsis thaliana GN=At3g46030 PE=1 SV=3) HSP 1 Score: 174.096 bits (440), Expect = 3.366e-43 Identity = 89/102 (87.25%), Postives = 92/102 (90.20%), Query Frame = 1 Query: 202 GDXXXXXXXXSIETYKIYIFKVLKQVHPDIGISSKGMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 507 GD S+ETYKIYIFKVLKQVHPDIGISSK MGIMNSFINDIFEKLA E+S+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 44 GDKKKKMKKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 145
BLAST of CF504193 vs. ExPASy Swiss-Prot
Match: H2B6_ARATH (Histone H2B.6 OS=Arabidopsis thaliana GN=H2B PE=1 SV=3) HSP 1 Score: 174.096 bits (440), Expect = 3.366e-43 Identity = 89/102 (87.25%), Postives = 92/102 (90.20%), Query Frame = 1 Query: 202 GDXXXXXXXXSIETYKIYIFKVLKQVHPDIGISSKGMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 507 GD S+ETYKIYIFKVLKQVHPDIGISSK MGIMNSFINDIFEKLA E+S+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 49 GDKKKKMKKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150
BLAST of CF504193 vs. ExPASy Swiss-Prot
Match: H2B3_ARATH (Histone H2B.3 OS=Arabidopsis thaliana GN=At2g28720 PE=1 SV=3) HSP 1 Score: 174.096 bits (440), Expect = 3.366e-43 Identity = 89/92 (96.74%), Postives = 90/92 (97.83%), Query Frame = 1 Query: 232 SIETYKIYIFKVLKQVHPDIGISSKGMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 507 S ETYKIYIFKVLKQVHPDIGISSK MGIMNSFINDIFEKLAQEAS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS Sbjct: 60 STETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 151 The following BLAST results are available for this feature:
BLAST of CF504193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 205
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504193 ID=CF504193; Name=CF504193; organism=Citrus sinensis; type=EST; length=515bpback to top |