CF504207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC2_ASHGO (Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossypii GN=UBC2 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 4.390e-25 Identity = 50/114 (43.86%), Postives = 73/114 (64.04%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY-----ESTARSW 399 W A I+GP+D+PY G F + + F +YP KPP V F +++FHPN+ +NG ICLDIL+ +W+P ++ +L SI SL DPNP P E A ++K K++Y E+ +SW Sbjct: 36 WNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSW 149
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC2_USTMA (Ubiquitin-conjugating enzyme E2 2 OS=Ustilago maydis GN=UBC2 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.348e-25 Identity = 47/102 (46.08%), Postives = 67/102 (65.69%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY 378 W A I GP+D+P+ G F + + F YP KPP V F +K+FHPN+ +NG +CLDIL+ +WSP ++ +L SI SLL DPNP+ P E A +Y+ + +Y Sbjct: 36 WNAVIFGPADTPFEDGTFKLVLTFDESYPNKPPTVKFLSKMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQSLLHDPNPNSPANAEAASLYRENMKEY 137 HSP 2 Score: 22.3274 bits (46), Expect = 7.348e-25 Identity = 10/30 (33.33%), Postives = 15/30 (50.00%), Query Frame = 3 Query: 6 KDLQKDPPTSCSAGPVAEDMFHLASNNYGP 95 K L DPP S P A+++ + +GP Sbjct: 14 KRLSTDPPGGISGAPCADNLMIWNAVIFGP 43
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC2_DEBHA (Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces hansenii GN=UBC2 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 7.368e-25 Identity = 49/117 (41.88%), Postives = 74/117 (63.25%), Query Frame = 1 Query: 70 TWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY-----ESTARSWTQ 405 +W A I+GP+D+P+ G F + + F YP KPP V F +++FHPN+ ++G +CLDIL+ +WSP +S +L SI SLL DPN P E A++YK +++Y E+ SW + Sbjct: 35 SWNAVIIGPADTPFEDGTFRLILQFDEQYPNKPPSVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSIQSLLNDPNISSPANVEAANLYKDHRSQYIKRVRETVENSWNE 151 HSP 2 Score: 21.557 bits (44), Expect = 7.368e-25 Identity = 9/30 (30.00%), Postives = 17/30 (56.67%), Query Frame = 3 Query: 6 KDLQKDPPTSCSAGPVAEDMFHLASNNYGP 95 K +Q+D P+ SA P+ +++ + GP Sbjct: 14 KRMQQDAPSGVSASPLPDNVMSWNAVIIGP 43
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC2_KLULA (Ubiquitin-conjugating enzyme E2 2 OS=Kluyveromyces lactis GN=UBC2 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.277e-24 Identity = 49/114 (42.98%), Postives = 73/114 (64.04%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY-----ESTARSW 399 W A I+GP+D+PY G F + + F +YP KPP V F +++FHPN+ +NG ICLDIL+ +W+P ++ +L SI SL DPNP P E A +++ K++Y E+ +SW Sbjct: 36 WNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFQDHKSQYVKRVKETVEKSW 149
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC2_SCHPO (Ubiquitin-conjugating enzyme E2 2 OS=Schizosaccharomyces pombe GN=rhp6 PE=1 SV=3) HSP 1 Score: 105.916 bits (263), Expect = 2.764e-24 Identity = 46/107 (42.99%), Postives = 67/107 (62.62%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTAR 393 W A I+GP+D+P+ G F + + F YP KPP V F + +FHPN+ +NG +CLDIL+ +WSP ++ +L SI SLL DPN P E A +++ +K +Y R Sbjct: 36 WNAVIIGPADTPFEDGTFKLVLSFDEQYPNKPPLVKFVSTMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQSLLNDPNNASPANAEAAQLHRENKKEYVRRVR 142 HSP 2 Score: 25.409 bits (54), Expect = 2.764e-24 Identity = 9/20 (45.00%), Postives = 15/20 (75.00%), Query Frame = 3 Query: 6 KDLQKDPPTSCSAGPVAEDM 65 K +Q+DPP SA PV++++ Sbjct: 14 KRMQQDPPAGVSASPVSDNV 33
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC21_ARATH (Probable ubiquitin carrier protein E2 21 OS=Arabidopsis thaliana GN=UBC21 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.412e-23 Identity = 53/117 (45.30%), Postives = 73/117 (62.39%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKS-DKAKYESTARSWTQKYAM 417 W A I GPS++PY GGVF + P YP +PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD PL + ++ +S D + S A+ +T+ AM Sbjct: 37 WTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGFNSMAQMYTRLAAM 153
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC2_CRYNE (Ubiquitin-conjugating enzyme E2 2 OS=Cryptococcus neoformans GN=UBC2 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.844e-23 Identity = 47/103 (45.63%), Postives = 67/103 (65.05%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYE 381 W A I GP ++P+ G F +T+ F YP KPP V F +K+FHPNI +NG +CLDIL+ +WSP ++ +L S+ SLL DPNP P + A ++K + +YE Sbjct: 36 WNAVIFGPPETPFEDGSFRLTLTFTDAYPNKPPTVRFISKMFHPNIYANGELCLDILQNRWSPTYDVAAILTSVQSLLNDPNPASPANVDAAQLFKENLKEYE 138
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC16_SCHPO (Ubiquitin-conjugating enzyme E2 16 OS=Schizosaccharomyces pombe GN=ubc16 PE=2 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 1.195e-22 Identity = 51/118 (43.22%), Postives = 74/118 (62.71%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKS-DKAKYESTARSWTQKYAMG 420 W+A I GP+++PY GG +++ IH YP PP V F+TK+ HPNI+ +NG +C+DILK WSPA ++ L+I SLL++ + PL + A + ++ DK Y S R T YA G Sbjct: 37 WKAVIEGPTETPYEGGQWVLDIHVHEGYPISPPSVYFQTKIVHPNISWTNGEVCMDILKTHWSPAWSLQSACLAIISLLSNYDASSPLNVDAAKLLRTGDKTAYNSLVRCTTYLYAKG 154
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBE2C_DICDI (Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum GN=ube2c PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.561e-22 Identity = 50/115 (43.48%), Postives = 72/115 (62.61%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKS--------DKAKYESTAR 393 W TI G D+ Y F +++ FP DYP+KPP V F T+ FHPN+++NG+ICLDILK++WSP + +L+SI SLL +PN + PL A ++ + DK E+T+R Sbjct: 38 WIGTIQGAKDTVYEQMEFKMSLKFPTDYPYKPPTVKFETQCFHPNVDNNGNICLDILKDKWSPVYNVRSLLISIQSLLGEPNNESPLNSYAASLWSNQDEYKKVLDKRYQEATSR 152
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC11_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC11 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 4.543e-22 Identity = 45/102 (44.12%), Postives = 67/102 (65.69%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY 378 W I GP D+PY+G F V++ FP +YPF PP + F + ++HPN++ +G+ICLDILKE+WS + +LLS+ SLL +PN PL A ++ +D +Y Sbjct: 41 WVGYITGPKDTPYSGLKFKVSLKFPQNYPFHPPMIKFLSPMWHPNVDKSGNICLDILKEKWSAVYNVETILLSLQSLLGEPNNRSPLNAVAAELWDADMEEY 142 The following BLAST results are available for this feature:
BLAST of CF504207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 251
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504207 ID=CF504207; Name=CF504207; organism=Citrus sinensis; type=EST; length=472bpback to top |