CF504207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 1.937e-74 Identity = 112/116 (96.55%), Postives = 116/116 (100.00%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAMG 420 WQATIMGPSDSPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK+D+AKYESTARSWTQKYAMG Sbjct: 33 WQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG 148 HSP 2 Score: 55.8398 bits (133), Expect = 1.937e-74 Identity = 25/31 (80.65%), Postives = 26/31 (83.87%), Query Frame = 3 Query: 3 LKDLQKDPPTSCSAGPVAEDMFHLASNNYGP 95 LKDLQKDPPTSCSAGPVAEDMFH + GP Sbjct: 10 LKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 40
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 4.297e-74 Identity = 113/116 (97.41%), Postives = 115/116 (99.14%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAMG 420 WQATIMGPS+SPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK+DK KYESTARSWTQKYAMG Sbjct: 33 WQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARSWTQKYAMG 148 HSP 2 Score: 55.8398 bits (133), Expect = 4.297e-74 Identity = 25/31 (80.65%), Postives = 26/31 (83.87%), Query Frame = 3 Query: 3 LKDLQKDPPTSCSAGPVAEDMFHLASNNYGP 95 LKDLQKDPPTSCSAGPVAEDMFH + GP Sbjct: 10 LKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 40
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 7.309e-74 Identity = 112/116 (96.55%), Postives = 115/116 (99.14%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAMG 420 WQATIMGPSDSPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK+DK KYESTAR+WTQKYAMG Sbjct: 33 WQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARTWTQKYAMG 148 HSP 2 Score: 55.8398 bits (133), Expect = 7.309e-74 Identity = 25/31 (80.65%), Postives = 26/31 (83.87%), Query Frame = 3 Query: 3 LKDLQKDPPTSCSAGPVAEDMFHLASNNYGP 95 LKDLQKDPPTSCSAGPVAEDMFH + GP Sbjct: 10 LKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 40
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 9.533e-74 Identity = 111/116 (95.69%), Postives = 116/116 (100.00%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAMG 420 WQATIMGP+DSPYAGGVFLV+IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK+D+AKYE+TARSWTQKYAMG Sbjct: 33 WQATIMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 148 HSP 2 Score: 55.8398 bits (133), Expect = 9.533e-74 Identity = 25/31 (80.65%), Postives = 26/31 (83.87%), Query Frame = 3 Query: 3 LKDLQKDPPTSCSAGPVAEDMFHLASNNYGP 95 LKDLQKDPPTSCSAGPVAEDMFH + GP Sbjct: 10 LKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 40
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 4.692e-73 Identity = 109/116 (93.97%), Postives = 116/116 (100.00%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAMG 420 WQATIMGP++SPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK+D+AKYE+TAR+WTQKYAMG Sbjct: 33 WQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARNWTQKYAMG 148 HSP 2 Score: 55.8398 bits (133), Expect = 4.692e-73 Identity = 25/31 (80.65%), Postives = 26/31 (83.87%), Query Frame = 3 Query: 3 LKDLQKDPPTSCSAGPVAEDMFHLASNNYGP 95 LKDLQKDPPTSCSAGPVAEDMFH + GP Sbjct: 10 LKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 40
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2) HSP 1 Score: 235.343 bits (599), Expect = 3.286e-71 Identity = 107/116 (92.24%), Postives = 115/116 (99.14%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAMG 420 WQATIMGP +SPYAGGVFLV+IHFPPDYPFKPPKV+F+TKV+HPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK+D++KYESTARSWTQKYAMG Sbjct: 33 WQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYESTARSWTQKYAMG 148 HSP 2 Score: 53.1434 bits (126), Expect = 3.286e-71 Identity = 23/31 (74.19%), Postives = 26/31 (83.87%), Query Frame = 3 Query: 3 LKDLQKDPPTSCSAGPVAEDMFHLASNNYGP 95 LKDLQKDPP++CSAGPVAEDMFH + GP Sbjct: 10 LKDLQKDPPSNCSAGPVAEDMFHWQATIMGP 40
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 8.679e-69 Identity = 107/116 (92.24%), Postives = 115/116 (99.14%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAMG 420 WQATIMGP+DSP+AGGVFLVTIHFPPDYPFKPPKVAFRTKV+HPNINSNGSICLDILKEQWSPALT+SKVLLSICSLLTDPNPDDPLVPEIAH+YK+D+ KYESTA+SWTQKYAMG Sbjct: 33 WQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDRVKYESTAQSWTQKYAMG 148 HSP 2 Score: 44.2838 bits (103), Expect = 8.679e-69 Identity = 18/31 (58.06%), Postives = 22/31 (70.97%), Query Frame = 3 Query: 3 LKDLQKDPPTSCSAGPVAEDMFHLASNNYGP 95 L+DLQ+DPP SCSAGP +DMF + GP Sbjct: 10 LRDLQRDPPVSCSAGPTGDDMFQWQATIMGP 40
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 4.656e-67 Identity = 102/115 (88.70%), Postives = 111/115 (96.52%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAM 417 WQATIMGP++SPY+GGVFLV IHFPPDYPFKPPKV FRTKVFHPNINSNG+ICLDILK+QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAH+YK+DK KYE+ ARSWTQKYA+ Sbjct: 33 WQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKTDKTKYEAMARSWTQKYAL 147 HSP 2 Score: 48.1358 bits (113), Expect = 4.656e-67 Identity = 20/31 (64.52%), Postives = 23/31 (74.19%), Query Frame = 3 Query: 3 LKDLQKDPPTSCSAGPVAEDMFHLASNNYGP 95 LK+LQ+DPP SCSAGP EDMFH + GP Sbjct: 10 LKELQRDPPVSCSAGPTGEDMFHWQATIMGP 40
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC1_MAGGR (Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnaporthe grisea GN=UBC1 PE=3 SV=2) HSP 1 Score: 213.772 bits (543), Expect = 1.901e-62 Identity = 95/115 (82.61%), Postives = 108/115 (93.91%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAM 417 WQATIMGPSDSPYAGGVF + IHFP DYPFKPPKV F T+++HPNINSNGSICLDIL++QWSPALTISKVLLSICS+LTDPNPDDPLVPEIAH+YK+ +A+YESTAR WT+KYA+ Sbjct: 33 WQATIMGPSDSPYAGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVYKTARAQYESTAREWTRKYAI 147 HSP 2 Score: 45.4394 bits (106), Expect = 1.901e-62 Identity = 19/31 (61.29%), Postives = 23/31 (74.19%), Query Frame = 3 Query: 3 LKDLQKDPPTSCSAGPVAEDMFHLASNNYGP 95 L DL +DPP+SCSAGPV ED+FH + GP Sbjct: 10 LTDLGRDPPSSCSAGPVGEDLFHWQATIMGP 40
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC4_SCHPO (Ubiquitin-conjugating enzyme E2 4 OS=Schizosaccharomyces pombe GN=ubc4 PE=2 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 5.496e-62 Identity = 93/115 (80.87%), Postives = 109/115 (94.78%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAM 417 WQATIMGP+DSPYAGGVF ++IHFP DYPFKPPKV F T+++HPNINSNGSICLDIL++QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAH+YK+D+++YE +AR WT+KYA+ Sbjct: 33 WQATIMGPADSPYAGGVFFLSIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHVYKTDRSRYELSAREWTRKYAI 147 HSP 2 Score: 45.4394 bits (106), Expect = 5.496e-62 Identity = 19/31 (61.29%), Postives = 23/31 (74.19%), Query Frame = 3 Query: 3 LKDLQKDPPTSCSAGPVAEDMFHLASNNYGP 95 L DL KDPP+SCSAGPV +D+FH + GP Sbjct: 10 LADLGKDPPSSCSAGPVGDDLFHWQATIMGP 40 The following BLAST results are available for this feature:
BLAST of CF504207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 251
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504207 ID=CF504207; Name=CF504207; organism=Citrus sinensis; type=EST; length=472bpback to top |