CF504207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC9_YEAST (SUMO-conjugating enzyme UBC9 OS=Saccharomyces cerevisiae GN=UBC9 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 3.255e-20 Identity = 43/116 (37.07%), Postives = 69/116 (59.48%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKE--QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 414 W+A I G + +AGGV+ +T+ +P +YP KPPKV F +HPN+ +G+ICL IL E W PA+T+ +++L + LL PNP+ P + +KA+Y+ ++Y+ Sbjct: 41 WEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFYHPNVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKVLLQAKQYS 156
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC5_ARATH (Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana GN=UBC5 PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 3.255e-20 Identity = 45/110 (40.91%), Postives = 66/110 (60.00%), Query Frame = 1 Query: 91 GPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLS-ICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 414 GP DS Y GGV+ + + P YP+K P V F TK++HPN++ +GS+CLD++ + WSP + V + + LL PNP DPL E A + D+ YE + + +KYA Sbjct: 38 GPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVKEYCEKYA 147
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC4_ARATH (Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana GN=UBC4 PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 3.255e-20 Identity = 45/110 (40.91%), Postives = 66/110 (60.00%), Query Frame = 1 Query: 91 GPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLS-ICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 414 GP DS Y GGV+ + + P YP+K P V F TK++HPN++ +GS+CLD++ + WSP + V + + LL PNP DPL E A + D+ YE + + +KYA Sbjct: 38 GPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVKEYCEKYA 147
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBE2S_DANRE (Ubiquitin-conjugating enzyme E2 S OS=Danio rerio GN=ube2s PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 3.559e-20 Identity = 47/113 (41.59%), Postives = 65/113 (57.52%), Query Frame = 1 Query: 82 TIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAMG 420 +I GP +PYAGGVF + + D+P PP+ F TK+FHPN+ G IC+++LK W L + VLL+I LL PNP+ L E + D +Y S A T+ +AMG Sbjct: 46 SIEGPEGTPYAGGVFRMRLVLGKDFPAVPPRGYFLTKIFHPNVGHKGEICVNVLKRDWKAELGLRHVLLTIKCLLIHPNPESALNEEAGKLLLEDYKEYASRAHLLTEIHAMG 158 HSP 2 Score: 20.7866 bits (42), Expect = 3.559e-20 Identity = 10/28 (35.71%), Postives = 13/28 (46.43%), Query Frame = 3 Query: 12 LQKDPPTSCSAGPVAEDMFHLASNNYGP 95 L DPP P ED+ L ++ GP Sbjct: 23 LAADPPEGIKIYPSEEDITELHTSIEGP 50
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBE2C_DROME (Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 4.252e-20 Identity = 45/113 (39.82%), Postives = 72/113 (63.72%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKY 411 W TI GP ++ Y+G + +++ FP YP+ P V F T FHPN++ G+ICLDILK++WS + +LLSI SLL +PN + PL + A M+ +D+ +Y+ ++ +K+ Sbjct: 64 WVGTIAGPRNTVYSGQTYRLSLDFPNSYPYAAPVVKFLTSCFHPNVDLQGAICLDILKDKWSALYDVRTILLSIQSLLGEPNNESPLNAQAAMMW-NDQKEYKKYLDAFYEKH 175
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC7_CAEEL (Probable ubiquitin-conjugating enzyme E2 7 OS=Caenorhabditis elegans GN=ubc-7 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 4.252e-20 Identity = 43/116 (37.07%), Postives = 70/116 (60.34%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYE 381 W+ ++GP D+ Y GG F + FP DYP KPPK+ F ++++HPNI+ G++C+ IL +E+W P T+ +LLS+ S+LTDPN + P + A M + + A+++ Sbjct: 36 WEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLTDPNFESPANVDAAKMQRENYAEFK 151
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC7_YEAST (Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces cerevisiae GN=UBC7 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 4.674e-20 Identity = 42/116 (36.21%), Postives = 66/116 (56.90%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYE 381 W I GP D+PYA GVF + FP DYP PPK+ F + HPNI NG +C+ IL +E+WSP ++ K+LLS+ S+L++PN + + +++ ++ ++E Sbjct: 37 WDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFE 152 HSP 2 Score: 20.4014 bits (41), Expect = 4.674e-20 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 3 LKDLQKDPPTSCSAGPVAED 62 L+ L KD P AGP +E+ Sbjct: 13 LQQLIKDSPPGIVAGPKSEN 32
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC_ASFP4 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) GN=UBC PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 7.252e-20 Identity = 44/104 (42.31%), Postives = 66/104 (63.46%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-----KEQ---WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 360 W + GP+D+ Y GG+F I FPP+YP++PP++ F ++++HPNI S+G +C+ IL +EQ WSP I +LLS+ SLL +PN D P + A Y+ Sbjct: 33 WDVILKGPADTLYEGGLFKAKIGFPPNYPYEPPRLTFTSEMWHPNIYSDGRVCISILHGDNAEEQGMTWSPVQKIDTILLSVISLLNEPNTDSPANVDAAKSYR 136
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC7_SCHPO (Ubiquitin-conjugating enzyme E2-18 kDa OS=Schizosaccharomyces pombe GN=ubc3 PE=2 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 7.252e-20 Identity = 42/126 (33.33%), Postives = 68/126 (53.97%), Query Frame = 1 Query: 70 TWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQK 408 TW I GP +P+ GG++ T+ FP DYP PP + F + FHPN+ +G++C+ IL E+WSP ++ K+LLS+ S+L +PN + + M++ D+ +Y R +K Sbjct: 37 TWDCLIQGPDGTPFEGGLYPATLKFPSDYPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKILLSVMSMLAEPNDESGANIDACKMWREDREEYCRVVRRLARK 162
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBC_ASFK5 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Pig/Kenya/KEN-50/1950) GN=UBC PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 9.472e-20 Identity = 48/125 (38.40%), Postives = 68/125 (54.40%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--------WSPALTISKVLLSICSLLTDPNPDDPLVPEIAH-----MYKSDKAKYESTARSWTQK 408 W + GPSD+ Y GG+F I FPP+YP++PPK+ F ++++HPNI +G +C+ IL WSPA I VLLS+ SL +PN D P + A M+K D Y + +K Sbjct: 33 WDVILKGPSDTFYEGGLFKAKITFPPNYPYEPPKLTFTSEMWHPNIYPDGRLCISILHTDNVEERGMTWSPAQKIETVLLSVISLFNEPNTDSPANVDAAKSYRKLMHKEDLESYPMEVKKTVKK 157 The following BLAST results are available for this feature:
BLAST of CF504207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 251
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504207 ID=CF504207; Name=CF504207; organism=Citrus sinensis; type=EST; length=472bpback to top |