CF504207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBCX_YEAST (Ubiquitin-conjugating enzyme E2-21 kDa OS=Saccharomyces cerevisiae GN=PEX4 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.669e-14 Identity = 41/113 (36.28%), Postives = 64/113 (56.64%), Query Frame = 1 Query: 67 STWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAF-RTKVFHPNINS-NGSICLDILK-EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK-SDKAKYESTAR 393 S W+A I GPSD+PY F + I P YP PPK++F + + H N+ S G ICL+ILK E+W+P + + ++ LL +P D PL +I ++ + D + Y+ + Sbjct: 59 SKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNIIRCGDMSAYQGIVK 171
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBE2F_CHICK (NEDD8-conjugating enzyme UBE2F OS=Gallus gallus GN=UBE2F PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.486e-14 Identity = 44/121 (36.36%), Postives = 63/121 (52.07%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 414 +Q T++ P + Y GG F I P Y PPKV T+++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + DK + + + ++YA Sbjct: 65 FQLTVI-PDEGYYQGGKFQFEIEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVEDYIKRYA 184
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBE2F_RAT (NEDD8-conjugating enzyme UBE2F OS=Rattus norvegicus GN=Ube2f PE=2 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 1.730e-13 Identity = 42/116 (36.21%), Postives = 57/116 (49.14%), Query Frame = 1 Query: 88 MGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 414 + P + Y GG F P Y PPKV TK++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + DK + + ++YA Sbjct: 69 VSPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRDKVDEYIKRYA 184
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBE2F_HUMAN (NEDD8-conjugating enzyme UBE2F OS=Homo sapiens GN=UBE2F PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.730e-13 Identity = 42/114 (36.84%), Postives = 57/114 (50.00%), Query Frame = 1 Query: 94 PSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 414 P + Y GG F P Y PPKV TK++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + DK + + + ++YA Sbjct: 71 PDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKRYA 184
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UB2FA_MOUSE (NEDD8-conjugating enzyme UBE2F OS=Mus musculus GN=Ube2f PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.730e-13 Identity = 42/116 (36.21%), Postives = 57/116 (49.14%), Query Frame = 1 Query: 88 MGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 414 + P + Y GG F P Y PPKV TK++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + DK + + ++YA Sbjct: 69 VSPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRDKVDEYIKRYA 184
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBE2U_HUMAN (Ubiquitin-conjugating enzyme E2 U OS=Homo sapiens GN=UBE2U PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.260e-13 Identity = 40/118 (33.90%), Postives = 68/118 (57.63%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSN-GSICLDIL--KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYAM 417 W+ I G +S + G VF +TIHF +Y + PP V F T FHPN++ + G C+D L E+W+ T+S +LL++ +L++P ++P+ E A + D++ Y + R + + M Sbjct: 36 WEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILVKDESLYRTILRLFNRPLQM 153
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBE2F_BOVIN (NEDD8-conjugating enzyme UBE2F OS=Bos taurus GN=UBE2F PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.260e-13 Identity = 41/114 (35.96%), Postives = 57/114 (50.00%), Query Frame = 1 Query: 94 PSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 414 P + Y GG F P Y PPKV T+++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL E A + DK + + + ++YA Sbjct: 71 PDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTRIWHPNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVEDYIKRYA 184
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: Y1A1_ENCCU (Probable ubiquitin-conjugating enzyme E2 ECU01_1010 OS=Encephalitozoon cuniculi GN=ECU01_1010 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.951e-13 Identity = 36/116 (31.03%), Postives = 57/116 (49.14%), Query Frame = 1 Query: 73 WQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL--------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKSDKAKY 378 W DS YAG + + FP YP +PP + F +K+FHPNI +G +C+ IL K++W+P I +++SI +L PN P + + MY+ + +Y Sbjct: 68 WDIYFTLGGDSLYAGRILKAVMKFPSSYPLRPPTLKFVSKMFHPNIYEDGKMCISILEEDKQQDSSVFGDPKDKWTPVQNIRTIVMSIVVILNSPNISSPANVDASVMYRDNPEEY 183
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UBE2F_DANRE (NEDD8-conjugating enzyme UBE2F OS=Danio rerio GN=ube2f PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.951e-13 Identity = 41/116 (35.34%), Postives = 59/116 (50.86%), Query Frame = 1 Query: 88 MGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 414 + P + Y GG F I P Y PPKV T+++HPNI G ICL +L+E W+P T+ V+ + SL TD N DDPL + A + DK + + + + + YA Sbjct: 69 ISPDEGYYLGGKFQFEIEVPEAYNMVPPKVKCLTRIWHPNIAETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIDAAEHHLRDKEDFRNKVQDFIKNYA 184
BLAST of CF504207 vs. ExPASy Swiss-Prot
Match: UB2FB_MOUSE (NEDD8-conjugating enzyme UBE2F-B OS=Mus musculus GN=Ube2fb PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.034e-13 Identity = 42/116 (36.21%), Postives = 57/116 (49.14%), Query Frame = 1 Query: 88 MGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ------WSPALTISKVLLSICSLLTD-PNPDDPLVPEIAHMYKSDKAKYESTARSWTQKYA 414 + P + Y GG F I P Y PPKV TK++HPNI G ICL +L+E W+P T+ V+ + SL TD N DPL E A + DK + + ++YA Sbjct: 69 VSPDEGYYQGGNFQFEIEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREHSADGTGWAPTRTLKDVVWGLNSLFTDLLNFYDPLNIEAAEHHLQDKEDFRDKVDEYIRRYA 184 The following BLAST results are available for this feature:
BLAST of CF504207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 251
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504207 ID=CF504207; Name=CF504207; organism=Citrus sinensis; type=EST; length=472bpback to top |